RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 HYPKQ9NX55 129 aa21.31■■□□□ 1
FAM3A-222ENST00000621967 ZBTB1Q9Y2K1 713 aa21.31■■□□□ 1
FAM3A-222ENST00000621967 ZNF330Q9Y3S2 320 aaPredicted RBP21.31■■□□□ 1
FAM3A-222ENST00000621967 CNTNAP4Q9C0A0 1308 aa21.31■■□□□ 1
FAM3A-222ENST00000621967 SSFA2P28290 1259 aa21.31■■□□□ 1
FAM3A-222ENST00000621967 PDIA6Q15084 440 aa21.31■■□□□ 1
FAM3A-222ENST00000621967 EZH2Q15910 746 aaKnown RBP21.31■■□□□ 1
FAM3A-222ENST00000621967 DEFB132Q7Z7B7 95 aa21.31■■□□□ 1
FAM3A-222ENST00000621967 C4BP0C0L5 1744 aa21.31■■□□□ 1
FAM3A-222ENST00000621967 NBPF26B4DH59 902 aa21.3■■□□□ 1
FAM3A-222ENST00000621967 NBPF14Q5TI25 921 aa21.3■■□□□ 1
FAM3A-222ENST00000621967 NBPF10Q6P3W6 841 aaKnown RBP21.3■■□□□ 1
FAM3A-222ENST00000621967 NBPF15Q8N660 670 aa21.3■■□□□ 1
FAM3A-222ENST00000621967 CAMKK2Q96RR4 588 aa21.3■■□□□ 1
FAM3A-222ENST00000621967 LRRCC1Q9C099 1032 aa21.3■■□□□ 1
FAM3A-222ENST00000621967 EXOC6BQ9Y2D4 811 aa21.3■■□□□ 1
FAM3A-222ENST00000621967 INTS5Q6P9B9 1019 aaKnown RBP21.29■■□□□ 1
FAM3A-222ENST00000621967 PNMA6EA0A0J9YXQ4 647 aa21.29■■□□□ 1
FAM3A-222ENST00000621967 UPF1Q92900 1129 aaKnown RBP eCLIP21.29■■□□□ 12e-6■■■□□ 18.4
FAM3A-222ENST00000621967 AK7Q96M32 723 aa21.29■■□□□ 1
FAM3A-222ENST00000621967 RREB1Q92766 1687 aa21.29■■□□□ 1
FAM3A-222ENST00000621967 MYH14Q7Z406 1995 aaKnown RBP21.29■■□□□ 1
FAM3A-222ENST00000621967 CYP2E1P05181 493 aaPredicted RBP21.28■■□□□ 1
FAM3A-222ENST00000621967 RC3H1Q5TC82 1133 aaKnown RBP21.28■■□□□ 1
FAM3A-222ENST00000621967 PHAXQ9H814 394 aaKnown RBP21.28■■□□□ 1
FAM3A-222ENST00000621967 ST18O60284 1047 aa21.27■■□□□ 1
FAM3A-222ENST00000621967 IL6STP40189 918 aaPredicted RBP21.27■■□□□ 1
FAM3A-222ENST00000621967 GNPATO15228 680 aa21.27■■□□□ 1
FAM3A-222ENST00000621967 PANK2Q9BZ23 570 aa21.27■■□□□ 1
FAM3A-222ENST00000621967 STAP2Q9UGK3 403 aa21.27■■□□□ 1
FAM3A-222ENST00000621967 MX1P20591 662 aa21.26■□□□□ 0.99
FAM3A-222ENST00000621967 NUCB2P80303 420 aa21.26■□□□□ 0.99
FAM3A-222ENST00000621967 AIMP1Q12904 312 aaKnown RBP21.26■□□□□ 0.99
FAM3A-222ENST00000621967 USP44Q9H0E7 712 aa21.26■□□□□ 0.99
FAM3A-222ENST00000621967 GRPEL1Q9HAV7 217 aa21.26■□□□□ 0.99
FAM3A-222ENST00000621967 BAG4O95429 457 aaKnown RBP21.25■□□□□ 0.99
FAM3A-222ENST00000621967 XAGE3Q8WTP9 111 aa21.25■□□□□ 0.99
FAM3A-222ENST00000621967 CWC22Q9HCG8 908 aaKnown RBP21.25■□□□□ 0.99
FAM3A-222ENST00000621967 LRRFIP2Q9Y608 721 aaKnown RBP21.25■□□□□ 0.99
FAM3A-222ENST00000621967 AOX1Q06278 1338 aa21.25■□□□□ 0.99
FAM3A-222ENST00000621967 COPS6Q7L5N1 327 aa21.25■□□□□ 0.99
FAM3A-222ENST00000621967 LRP10Q7Z4F1 713 aa21.25■□□□□ 0.99
FAM3A-222ENST00000621967 ARXQ96QS3 562 aa21.25■□□□□ 0.99
FAM3A-222ENST00000621967 GOLGA6L22H0YM25 854 aa21.24■□□□□ 0.99
FAM3A-222ENST00000621967 DDX58O95786 925 aaKnown RBP21.24■□□□□ 0.99
FAM3A-222ENST00000621967 SRCIN1Q9C0H9 1055 aa21.24■□□□□ 0.99
FAM3A-222ENST00000621967 RTCBQ9Y3I0 505 aaKnown RBP21.24■□□□□ 0.99
FAM3A-222ENST00000621967 SSH3Q8TE77 659 aa21.23■□□□□ 0.99
FAM3A-222ENST00000621967 ESYT1Q9BSJ8 1104 aa21.23■□□□□ 0.99
FAM3A-222ENST00000621967 COL15A1P39059 1388 aa21.23■□□□□ 0.99
FAM3A-222ENST00000621967 RPS6KA4O75676 772 aa21.23■□□□□ 0.99
FAM3A-222ENST00000621967 EIF5P55010 431 aaKnown RBP21.23■□□□□ 0.99
FAM3A-222ENST00000621967 UBTFL1P0CB47 393 aaPredicted RBP21.22■□□□□ 0.99
FAM3A-222ENST00000621967 KIF6Q6ZMV9 814 aa21.22■□□□□ 0.99
FAM3A-222ENST00000621967 NUP188Q5SRE5 1749 aa21.22■□□□□ 0.99
FAM3A-222ENST00000621967 KLHL40Q2TBA0 621 aa21.21■□□□□ 0.99
FAM3A-222ENST00000621967 IL17RAQ96F46 866 aa21.21■□□□□ 0.99
FAM3A-222ENST00000621967 PHF14O94880 888 aa21.21■□□□□ 0.99
FAM3A-222ENST00000621967 TSHZ3Q63HK5 1081 aa21.21■□□□□ 0.99
FAM3A-222ENST00000621967 TTLL7Q6ZT98 887 aa21.21■□□□□ 0.99
FAM3A-222ENST00000621967 A0A087WZG4 1122 aa21.2■□□□□ 0.98
FAM3A-222ENST00000621967 CHMLP26374 656 aa21.2■□□□□ 0.98
FAM3A-222ENST00000621967 ZNF827Q17R98 1081 aa21.2■□□□□ 0.98
FAM3A-222ENST00000621967 GAS2L3Q86XJ1 694 aa21.2■□□□□ 0.98
FAM3A-222ENST00000621967 TFCP2L1Q9NZI6 479 aa21.2■□□□□ 0.98
FAM3A-222ENST00000621967 UBR3Q6ZT12 1888 aa21.2■□□□□ 0.98
FAM3A-222ENST00000621967 POLA2Q14181 598 aa21.19■□□□□ 0.98
FAM3A-222ENST00000621967 ANKRD13DQ6ZTN6 518 aa21.19■□□□□ 0.98
FAM3A-222ENST00000621967 RIC3Q7Z5B4 369 aa21.19■□□□□ 0.98
FAM3A-222ENST00000621967 DZIP3Q86Y13 1208 aaKnown RBP21.19■□□□□ 0.98
FAM3A-222ENST00000621967 RRAGDQ9NQL2 400 aaPredicted RBP21.19■□□□□ 0.98
FAM3A-222ENST00000621967 PI4KAP2A4QPH2 592 aa21.19■□□□□ 0.98
FAM3A-222ENST00000621967 ANAPC15P60006 121 aa21.19■□□□□ 0.98
FAM3A-222ENST00000621967 PI4KAP1Q8N8J0 262 aa21.19■□□□□ 0.98
FAM3A-222ENST00000621967 AKT1S1Q96B36 256 aa21.19■□□□□ 0.98
FAM3A-222ENST00000621967 STK32BQ9NY57 414 aa21.19■□□□□ 0.98
FAM3A-222ENST00000621967 RAB11FIP3O75154 756 aa21.18■□□□□ 0.98
FAM3A-222ENST00000621967 TRAPPC3LQ5T215 181 aa21.18■□□□□ 0.98
FAM3A-222ENST00000621967 KSR2Q6VAB6 950 aa21.18■□□□□ 0.98
FAM3A-222ENST00000621967 ZBTB3Q9H5J0 574 aa21.18■□□□□ 0.98
FAM3A-222ENST00000621967 TBC1D2BQ9UPU7 963 aa21.18■□□□□ 0.98
FAM3A-222ENST00000621967 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.17■□□□□ 0.98
FAM3A-222ENST00000621967 EPB41L2O43491 1005 aaKnown RBP21.17■□□□□ 0.98
FAM3A-222ENST00000621967 ADRA2BP18089 450 aa21.17■□□□□ 0.98
FAM3A-222ENST00000621967 SMIM5Q71RC9 77 aa21.17■□□□□ 0.98
FAM3A-222ENST00000621967 ZGPATQ8N5A5 531 aaKnown RBP21.17■□□□□ 0.98
FAM3A-222ENST00000621967 PLBD2Q8NHP8 589 aa21.17■□□□□ 0.98
FAM3A-222ENST00000621967 MAP3K2Q9Y2U5 619 aa21.17■□□□□ 0.98
FAM3A-222ENST00000621967 ADCY9O60503 1353 aa21.17■□□□□ 0.98
FAM3A-222ENST00000621967 MCM2P49736 904 aa21.17■□□□□ 0.98
FAM3A-222ENST00000621967 AMIGO3Q86WK7 504 aa21.17■□□□□ 0.98
FAM3A-222ENST00000621967 ANO8Q9HCE9 1232 aaPredicted RBP21.17■□□□□ 0.98
FAM3A-222ENST00000621967 MAP3K15Q6ZN16 1313 aa21.17■□□□□ 0.98
FAM3A-222ENST00000621967 PKP1Q13835 747 aa21.16■□□□□ 0.98
FAM3A-222ENST00000621967 DNAAF4Q8WXU2 420 aa21.16■□□□□ 0.98
FAM3A-222ENST00000621967 ARFGEF2Q9Y6D5 1785 aa21.16■□□□□ 0.98
FAM3A-222ENST00000621967 MCCP23508 829 aa21.16■□□□□ 0.98
FAM3A-222ENST00000621967 RFC4P35249 363 aa21.16■□□□□ 0.98
FAM3A-222ENST00000621967 SLC15A2Q16348 729 aa21.16■□□□□ 0.98
FAM3A-222ENST00000621967 PPP1R42Q7Z4L9 355 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms