RNA–Protein interactions for RNA: ENST00000621790.4

TARDBP-226, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-226ENST00000621790 NYXQ9GZU5 481 aa14.62□□□□□ -0.07
TARDBP-226ENST00000621790 BCL2L12Q9HB09 334 aa14.62□□□□□ -0.07
TARDBP-226ENST00000621790 NIP7Q9Y221 180 aaKnown RBP eCLIP14.62□□□□□ -0.07
TARDBP-226ENST00000621790 PNPLA7Q6ZV29 1317 aa14.62□□□□□ -0.07
TARDBP-226ENST00000621790 NUP98P52948 1817 aa14.62□□□□□ -0.07
TARDBP-226ENST00000621790 GYS1P13807 737 aa14.61□□□□□ -0.07
TARDBP-226ENST00000621790 AMIGO3Q86WK7 504 aa14.61□□□□□ -0.07
TARDBP-226ENST00000621790 COL23A1Q86Y22 540 aaPredicted RBP14.61□□□□□ -0.07
TARDBP-226ENST00000621790 UTP14AQ9BVJ6 771 aaKnown RBP14.61□□□□□ -0.07
TARDBP-226ENST00000621790 ANO8Q9HCE9 1232 aaPredicted RBP14.61□□□□□ -0.07
TARDBP-226ENST00000621790 GTF3C3Q9Y5Q9 886 aa14.61□□□□□ -0.07
TARDBP-226ENST00000621790 CDHR2Q9BYE9 1310 aa14.61□□□□□ -0.07
TARDBP-226ENST00000621790 C4AP0C0L4 1744 aa14.61□□□□□ -0.07
TARDBP-226ENST00000621790 ANKRD36CQ5JPF3 1778 aa14.6□□□□□ -0.07
TARDBP-226ENST00000621790 SRP68Q9UHB9 627 aaKnown RBP14.6□□□□□ -0.07
TARDBP-226ENST00000621790 NBPF7P0C2Y1 421 aaPredicted RBP14.59□□□□□ -0.07
TARDBP-226ENST00000621790 GPTP24298 496 aa14.59□□□□□ -0.07
TARDBP-226ENST00000621790 TBC1D9BQ66K14 1250 aa14.59□□□□□ -0.07
TARDBP-226ENST00000621790 TPTE2Q6XPS3 522 aa14.59□□□□□ -0.07
TARDBP-226ENST00000621790 PLA2G12BQ9BX93 195 aa14.59□□□□□ -0.07
TARDBP-226ENST00000621790 TRMT112Q9UI30 125 aaKnown RBP14.59□□□□□ -0.07
TARDBP-226ENST00000621790 SH3TC1Q8TE82 1336 aa14.59□□□□□ -0.07
TARDBP-226ENST00000621790 CARMIL3Q8ND23 1372 aa14.59□□□□□ -0.07
TARDBP-226ENST00000621790 MSH5O43196 834 aa14.58□□□□□ -0.08
TARDBP-226ENST00000621790 HMMRO75330 724 aa14.58□□□□□ -0.08
TARDBP-226ENST00000621790 TM4SF1P30408 202 aa14.58□□□□□ -0.08
TARDBP-226ENST00000621790 CASP7P55210 303 aa14.58□□□□□ -0.08
TARDBP-226ENST00000621790 SUSD4Q5VX71 490 aa14.58□□□□□ -0.08
TARDBP-226ENST00000621790 ILDR2Q71H61 639 aa14.58□□□□□ -0.08
TARDBP-226ENST00000621790 UBN2Q6ZU65 1347 aa14.58□□□□□ -0.08
TARDBP-226ENST00000621790 MTX1Q13505 466 aa14.57□□□□□ -0.08
TARDBP-226ENST00000621790 HDAC1Q13547 482 aaPredicted RBP14.57□□□□□ -0.08
TARDBP-226ENST00000621790 NFIXQ14938 502 aa14.57□□□□□ -0.08
TARDBP-226ENST00000621790 UBE3BQ7Z3V4 1068 aa14.57□□□□□ -0.08
TARDBP-226ENST00000621790 RWDD1Q9H446 243 aaPredicted RBP14.57□□□□□ -0.08
TARDBP-226ENST00000621790 AFDNP55196 1824 aaKnown RBP14.57□□□□□ -0.08
TARDBP-226ENST00000621790 NTSR2O95665 410 aa14.56□□□□□ -0.08
TARDBP-226ENST00000621790 ATP8B2P98198 1209 aa14.56□□□□□ -0.08
TARDBP-226ENST00000621790 SLC10A5Q5PT55 438 aa14.56□□□□□ -0.08
TARDBP-226ENST00000621790 SMIM5Q71RC9 77 aa14.56□□□□□ -0.08
TARDBP-226ENST00000621790 NBPF5PQ86XG9 351 aaPredicted RBP14.56□□□□□ -0.08
TARDBP-226ENST00000621790 ANKRD44Q8N8A2 993 aa14.56□□□□□ -0.08
TARDBP-226ENST00000621790 CCDC136Q96JN2 1154 aa14.56□□□□□ -0.08
TARDBP-226ENST00000621790 LRRFIP2Q9Y608 721 aaKnown RBP14.56□□□□□ -0.08
TARDBP-226ENST00000621790 IRS4O14654 1257 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-226ENST00000621790 PDE8AO60658 829 aa14.55□□□□□ -0.08
TARDBP-226ENST00000621790 GTF2E1P29083 439 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-226ENST00000621790 RABL6Q3YEC7 729 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-226ENST00000621790 CEP85Q6P2H3 762 aa14.55□□□□□ -0.08
TARDBP-226ENST00000621790 PCDHB15Q9Y5E8 787 aa14.55□□□□□ -0.08
TARDBP-226ENST00000621790 TUBGCP6Q96RT7 1819 aa14.55□□□□□ -0.08
TARDBP-226ENST00000621790 BICDL1Q6ZP65 573 aa14.54□□□□□ -0.08
TARDBP-226ENST00000621790 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
TARDBP-226ENST00000621790 SUCLG2Q96I99 432 aa14.54□□□□□ -0.08
TARDBP-226ENST00000621790 COL24A1Q17RW2 1714 aa14.53□□□□□ -0.08
TARDBP-226ENST00000621790 RIC1Q4ADV7 1423 aa14.53□□□□□ -0.08
TARDBP-226ENST00000621790 PARP3Q9Y6F1 533 aa14.53□□□□□ -0.08
TARDBP-226ENST00000621790 POLRMTO00411 1230 aaKnown RBP14.52□□□□□ -0.09
TARDBP-226ENST00000621790 NPHP1O15259 732 aa14.52□□□□□ -0.09
TARDBP-226ENST00000621790 SERPINB2P05120 415 aa14.52□□□□□ -0.09
TARDBP-226ENST00000621790 CSF1RP07333 972 aa14.52□□□□□ -0.09
TARDBP-226ENST00000621790 ST5P78524 1137 aa14.52□□□□□ -0.09
TARDBP-226ENST00000621790 CNBD1Q8NA66 436 aa14.52□□□□□ -0.09
TARDBP-226ENST00000621790 SSH3Q8TE77 659 aa14.52□□□□□ -0.09
TARDBP-226ENST00000621790 KAZALD1Q96I82 304 aa14.52□□□□□ -0.09
TARDBP-226ENST00000621790 BICC1Q9H694 974 aaKnown RBP14.52□□□□□ -0.09
TARDBP-226ENST00000621790 C1orf115Q9H7X2 142 aa14.52□□□□□ -0.09
TARDBP-226ENST00000621790 CTSWP56202 376 aa14.51□□□□□ -0.09
TARDBP-226ENST00000621790 FOXO4P98177 505 aa14.51□□□□□ -0.09
TARDBP-226ENST00000621790 POLA2Q14181 598 aa14.51□□□□□ -0.09
TARDBP-226ENST00000621790 HSP90AB4PQ58FF6 505 aa14.51□□□□□ -0.09
TARDBP-226ENST00000621790 CENPQQ7L2Z9 268 aaPredicted RBP14.51□□□□□ -0.09
TARDBP-226ENST00000621790 GCC1Q96CN9 775 aa14.51□□□□□ -0.09
TARDBP-226ENST00000621790 NLRP3Q96P20 1036 aa14.51□□□□□ -0.09
TARDBP-226ENST00000621790 RTL9Q8NET4 1388 aa14.5□□□□□ -0.09
TARDBP-226ENST00000621790 SRGAP3O43295 1099 aa14.5□□□□□ -0.09
TARDBP-226ENST00000621790 MMP10P09238 476 aa14.5□□□□□ -0.09
TARDBP-226ENST00000621790 SF3B3Q15393 1217 aaKnown RBP14.5□□□□□ -0.09
TARDBP-226ENST00000621790 CCDC152Q4G0S7 254 aa14.5□□□□□ -0.09
TARDBP-226ENST00000621790 LMBR1LQ6UX01 489 aa14.5□□□□□ -0.09
TARDBP-226ENST00000621790 SIRT2Q8IXJ6 389 aa14.5□□□□□ -0.09
TARDBP-226ENST00000621790 MTFR1LQ9H019 292 aa14.5□□□□□ -0.09
TARDBP-226ENST00000621790 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
TARDBP-226ENST00000621790 PDZRN3Q9UPQ7 1066 aa14.5□□□□□ -0.09
TARDBP-226ENST00000621790 FAM177BA6PVY3 158 aa14.49□□□□□ -0.09
TARDBP-226ENST00000621790 DDR1Q08345 913 aa14.49□□□□□ -0.09
TARDBP-226ENST00000621790 ERFEQ4G0M1 354 aa14.49□□□□□ -0.09
TARDBP-226ENST00000621790 RTL5Q5HYW3 569 aaPredicted RBP14.49□□□□□ -0.09
TARDBP-226ENST00000621790 PRR5LQ6MZQ0 368 aa14.49□□□□□ -0.09
TARDBP-226ENST00000621790 NUTM1Q86Y26 1132 aa14.49□□□□□ -0.09
TARDBP-226ENST00000621790 TTLL11Q8NHH1 800 aa14.49□□□□□ -0.09
TARDBP-226ENST00000621790 JARID2Q92833 1246 aaPredicted RBP14.49□□□□□ -0.09
TARDBP-226ENST00000621790 DCTPP1Q9H773 170 aa14.49□□□□□ -0.09
TARDBP-226ENST00000621790 PNMA6EA0A0J9YXQ4 647 aa14.48□□□□□ -0.09
TARDBP-226ENST00000621790 IFIT5Q13325 482 aaKnown RBP14.48□□□□□ -0.09
TARDBP-226ENST00000621790 R3HDM1Q15032 1099 aaKnown RBP14.48□□□□□ -0.09
TARDBP-226ENST00000621790 CCDC57Q2TAC2 916 aa14.48□□□□□ -0.09
TARDBP-226ENST00000621790 EPHA10Q5JZY3 1008 aa14.48□□□□□ -0.09
TARDBP-226ENST00000621790 BRIP1Q9BX63 1249 aa14.48□□□□□ -0.09
TARDBP-226ENST00000621790 COPRSQ9NQ92 184 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms