RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PI4KAP1Q8N8J0 262 aa23.39■■□□□ 1.33
LITAF-220ENST00000620789 UTP14AQ9BVJ6 771 aaKnown RBP23.39■■□□□ 1.33
LITAF-220ENST00000620789 MAP3K2Q9Y2U5 619 aa23.39■■□□□ 1.33
LITAF-220ENST00000620789 COL11A2P13942 1736 aaPredicted RBP23.39■■□□□ 1.33
LITAF-220ENST00000620789 ABCC12Q96J65 1359 aa23.39■■□□□ 1.33
LITAF-220ENST00000620789 ATP5J2-PTCD1G3V325 749 aa23.38■■□□□ 1.33
LITAF-220ENST00000620789 CT47B1P0C2W7 299 aaPredicted RBP23.38■■□□□ 1.33
LITAF-220ENST00000620789 TRIM28Q13263 835 aaKnown RBP23.38■■□□□ 1.33
LITAF-220ENST00000620789 FKBP5Q13451 457 aaPredicted RBP23.38■■□□□ 1.33
LITAF-220ENST00000620789 MYD88Q99836 296 aa23.38■■□□□ 1.33
LITAF-220ENST00000620789 METTL22Q9BUU2 404 aaPredicted RBP23.38■■□□□ 1.33
LITAF-220ENST00000620789 PIM2Q9P1W9 311 aa23.38■■□□□ 1.33
LITAF-220ENST00000620789 RIC1Q4ADV7 1423 aa23.38■■□□□ 1.33
LITAF-220ENST00000620789 TNRC6CQ9HCJ0 1690 aaKnown RBP23.37■■□□□ 1.33
LITAF-220ENST00000620789 KLRG2A4D1S0 409 aaPredicted RBP23.36■■□□□ 1.33
LITAF-220ENST00000620789 TRMT112Q9UI30 125 aaKnown RBP23.36■■□□□ 1.33
LITAF-220ENST00000620789 BCS1LQ9Y276 419 aa23.35■■□□□ 1.33
LITAF-220ENST00000620789 GRIN3BO60391 1043 aa23.34■■□□□ 1.33
LITAF-220ENST00000620789 SRGNP10124 158 aa23.34■■□□□ 1.33
LITAF-220ENST00000620789 ALDH1L2Q3SY69 923 aa23.34■■□□□ 1.33
LITAF-220ENST00000620789 DALRD3Q5D0E6 543 aaKnown RBP23.34■■□□□ 1.33
LITAF-220ENST00000620789 MRPL50Q8N5N7 158 aaKnown RBP23.34■■□□□ 1.33
LITAF-220ENST00000620789 SSH1Q8WYL5 1049 aa23.34■■□□□ 1.33
LITAF-220ENST00000620789 NEXNQ0ZGT2 675 aa23.33■■□□□ 1.33
LITAF-220ENST00000620789 CCDC191Q8NCU4 936 aa23.33■■□□□ 1.33
LITAF-220ENST00000620789 SH3TC1Q8TE82 1336 aa23.33■■□□□ 1.32
LITAF-220ENST00000620789 ARFGEF1Q9Y6D6 1849 aa23.32■■□□□ 1.32
LITAF-220ENST00000620789 SLC10A5Q5PT55 438 aa23.32■■□□□ 1.32
LITAF-220ENST00000620789 TTLL6Q8N841 843 aa23.32■■□□□ 1.32
LITAF-220ENST00000620789 DNAAF4Q8WXU2 420 aa23.32■■□□□ 1.32
LITAF-220ENST00000620789 ZNF622Q969S3 477 aaKnown RBP eCLIP23.32■■□□□ 1.32
LITAF-220ENST00000620789 MASTLQ96GX5 879 aa23.32■■□□□ 1.32
LITAF-220ENST00000620789 IGKV5-2P06315 115 aa23.31■■□□□ 1.32
LITAF-220ENST00000620789 CRY2Q49AN0 593 aa23.31■■□□□ 1.32
LITAF-220ENST00000620789 STYK1Q6J9G0 422 aa23.31■■□□□ 1.32
LITAF-220ENST00000620789 SYNE4Q8N205 404 aa23.31■■□□□ 1.32
LITAF-220ENST00000620789 CWC25Q9NXE8 425 aaPredicted RBP23.31■■□□□ 1.32
LITAF-220ENST00000620789 NPR1P16066 1061 aa23.3■■□□□ 1.32
LITAF-220ENST00000620789 FAM89AQ96GI7 184 aa23.3■■□□□ 1.32
LITAF-220ENST00000620789 BCL2L13Q9BXK5 485 aa23.3■■□□□ 1.32
LITAF-220ENST00000620789 SMC4Q9NTJ3 1288 aa23.3■■□□□ 1.32
LITAF-220ENST00000620789 ZBTB38Q8NAP3 1195 aaPredicted RBP23.29■■□□□ 1.32
LITAF-220ENST00000620789 NLRP3Q96P20 1036 aa23.29■■□□□ 1.32
LITAF-220ENST00000620789 DDX60Q8IY21 1712 aaKnown RBP23.28■■□□□ 1.32
LITAF-220ENST00000620789 NEURL1BA8MQ27 555 aa23.28■■□□□ 1.32
LITAF-220ENST00000620789 F6X3S4 739 aa23.28■■□□□ 1.32
LITAF-220ENST00000620789 HCLS1P14317 486 aaPredicted RBP23.28■■□□□ 1.32
LITAF-220ENST00000620789 CWF19L2Q2TBE0 894 aaKnown RBP23.28■■□□□ 1.32
LITAF-220ENST00000620789 C3orf67Q6ZVT6 689 aa23.28■■□□□ 1.32
LITAF-220ENST00000620789 CNKSR1Q969H4 720 aa23.28■■□□□ 1.32
LITAF-220ENST00000620789 PTPRCP08575 1304 aa23.28■■□□□ 1.32
LITAF-220ENST00000620789 LAMB2P55268 1798 aa23.27■■□□□ 1.32
LITAF-220ENST00000620789 PCCAP05165 728 aaPredicted RBP23.27■■□□□ 1.32
LITAF-220ENST00000620789 RARSP54136 660 aaKnown RBP23.27■■□□□ 1.32
LITAF-220ENST00000620789 LINS1Q8NG48 757 aa23.27■■□□□ 1.32
LITAF-220ENST00000620789 RTL5Q5HYW3 569 aaPredicted RBP23.26■■□□□ 1.31
LITAF-220ENST00000620789 RPGRQ92834 1020 aaKnown RBP23.26■■□□□ 1.31
LITAF-220ENST00000620789 CACNA1SQ13698 1873 aa23.26■■□□□ 1.31
LITAF-220ENST00000620789 IRS4O14654 1257 aaPredicted RBP23.25■■□□□ 1.31
LITAF-220ENST00000620789 BRPF1P55201 1214 aaPredicted RBP23.25■■□□□ 1.31
LITAF-220ENST00000620789 PRPF40BQ6NWY9 871 aaKnown RBP23.25■■□□□ 1.31
LITAF-220ENST00000620789 ALDH1B1P30837 517 aa23.24■■□□□ 1.31
LITAF-220ENST00000620789 HOXA10P31260 410 aaPredicted RBP23.24■■□□□ 1.31
LITAF-220ENST00000620789 BEND3Q5T5X7 828 aa23.24■■□□□ 1.31
LITAF-220ENST00000620789 SLX4Q8IY92 1834 aa23.24■■□□□ 1.31
LITAF-220ENST00000620789 HSP90B1P14625 803 aaKnown RBP23.23■■□□□ 1.31
LITAF-220ENST00000620789 GCKRQ14397 625 aa23.23■■□□□ 1.31
LITAF-220ENST00000620789 CHD4Q14839 1912 aa23.22■■□□□ 1.31
LITAF-220ENST00000620789 SLC4A10Q6U841 1118 aa23.22■■□□□ 1.31
LITAF-220ENST00000620789 ARHGAP27Q6ZUM4 889 aa23.22■■□□□ 1.31
LITAF-220ENST00000620789 JARID2Q92833 1246 aaPredicted RBP23.22■■□□□ 1.31
LITAF-220ENST00000620789 RBM17Q96I25 401 aaKnown RBP23.22■■□□□ 1.31
LITAF-220ENST00000620789 CRAMP1Q96RY5 1269 aa23.22■■□□□ 1.31
LITAF-220ENST00000620789 CDHR2Q9BYE9 1310 aa23.22■■□□□ 1.31
LITAF-220ENST00000620789 H7C1W4 665 aa23.2■■□□□ 1.3
LITAF-220ENST00000620789 C21orf2O43822 256 aa23.2■■□□□ 1.3
LITAF-220ENST00000620789 SF3B3Q15393 1217 aaKnown RBP23.2■■□□□ 1.3
LITAF-220ENST00000620789 ZNF219Q9P2Y4 722 aaPredicted RBP23.2■■□□□ 1.3
LITAF-220ENST00000620789 KIF16BQ96L93 1317 aa23.19■■□□□ 1.3
LITAF-220ENST00000620789 ALDH1L1O75891 902 aa23.19■■□□□ 1.3
LITAF-220ENST00000620789 UBE3BQ7Z3V4 1068 aa23.19■■□□□ 1.3
LITAF-220ENST00000620789 C7orf43Q8WVR3 580 aa23.19■■□□□ 1.3
LITAF-220ENST00000620789 SRCIN1Q9C0H9 1055 aa23.19■■□□□ 1.3
LITAF-220ENST00000620789 NOB1Q9ULX3 412 aaKnown RBP23.19■■□□□ 1.3
LITAF-220ENST00000620789 ABCC4O15439 1325 aa23.18■■□□□ 1.3
LITAF-220ENST00000620789 PDE8AO60658 829 aa23.18■■□□□ 1.3
LITAF-220ENST00000620789 SOGA3Q5TF21 947 aa23.17■■□□□ 1.3
LITAF-220ENST00000620789 DDX46Q7L014 1031 aaKnown RBP23.17■■□□□ 1.3
LITAF-220ENST00000620789 BCAR3O75815 825 aa23.16■■□□□ 1.3
LITAF-220ENST00000620789 CASP7P55210 303 aa23.16■■□□□ 1.3
LITAF-220ENST00000620789 API5Q9BZZ5 524 aaKnown RBP23.16■■□□□ 1.3
LITAF-220ENST00000620789 PPEF1O14829 653 aaPredicted RBP23.15■■□□□ 1.3
LITAF-220ENST00000620789 ARHGAP45Q92619 1136 aa23.15■■□□□ 1.3
LITAF-220ENST00000620789 FER1L6Q2WGJ9 1857 aa23.15■■□□□ 1.3
LITAF-220ENST00000620789 MYH3P11055 1940 aa23.14■■□□□ 1.3
LITAF-220ENST00000620789 GRM8O00222 908 aa23.14■■□□□ 1.29
LITAF-220ENST00000620789 CTSWP56202 376 aa23.14■■□□□ 1.29
LITAF-220ENST00000620789 GRAPQ13588 217 aa23.14■■□□□ 1.29
LITAF-220ENST00000620789 CCDC93Q567U6 631 aa23.14■■□□□ 1.29
LITAF-220ENST00000620789 GRAPLQ8TC17 118 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms