RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 CCDC24Q8N4L8 307 aa17.15■□□□□ 0.34
MUC1-229ENST00000620770 NRXN2Q9P2S2 1712 aa17.15■□□□□ 0.34
MUC1-229ENST00000620770 BRPF1P55201 1214 aaPredicted RBP17.14■□□□□ 0.33
MUC1-229ENST00000620770 CWF19L2Q2TBE0 894 aaKnown RBP17.14■□□□□ 0.33
MUC1-229ENST00000620770 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
MUC1-229ENST00000620770 TNNQ9UQP3 1299 aa17.14■□□□□ 0.33
MUC1-229ENST00000620770 DLEC1Q9Y238 1755 aa17.13■□□□□ 0.33
MUC1-229ENST00000620770 A0A0G2JLW4 131 aa17.13■□□□□ 0.33
MUC1-229ENST00000620770 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
MUC1-229ENST00000620770 SUSD4Q5VX71 490 aa17.13■□□□□ 0.33
MUC1-229ENST00000620770 ZKSCAN2Q63HK3 967 aa17.13■□□□□ 0.33
MUC1-229ENST00000620770 NLRP10Q86W26 655 aa17.13■□□□□ 0.33
MUC1-229ENST00000620770 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
MUC1-229ENST00000620770 ISCA1Q9BUE6 129 aa17.13■□□□□ 0.33
MUC1-229ENST00000620770 BCS1LQ9Y276 419 aa17.13■□□□□ 0.33
MUC1-229ENST00000620770 IGKV5-2P06315 115 aa17.12■□□□□ 0.33
MUC1-229ENST00000620770 DPEP1P16444 411 aa17.12■□□□□ 0.33
MUC1-229ENST00000620770 GTF2E1P29083 439 aaPredicted RBP17.12■□□□□ 0.33
MUC1-229ENST00000620770 C1QTNF8P60827 252 aa17.12■□□□□ 0.33
MUC1-229ENST00000620770 PARP10Q53GL7 1025 aa17.12■□□□□ 0.33
MUC1-229ENST00000620770 RTL5Q5HYW3 569 aaPredicted RBP17.12■□□□□ 0.33
MUC1-229ENST00000620770 NUTM1Q86Y26 1132 aa17.12■□□□□ 0.33
MUC1-229ENST00000620770 CLUAP1Q96AJ1 413 aa17.12■□□□□ 0.33
MUC1-229ENST00000620770 UTP14AQ9BVJ6 771 aaKnown RBP17.12■□□□□ 0.33
MUC1-229ENST00000620770 NEURL1BA8MQ27 555 aa17.11■□□□□ 0.33
MUC1-229ENST00000620770 PLIN1O60240 522 aa17.11■□□□□ 0.33
MUC1-229ENST00000620770 NTSR2O95665 410 aa17.11■□□□□ 0.33
MUC1-229ENST00000620770 TRIM27P14373 513 aa17.11■□□□□ 0.33
MUC1-229ENST00000620770 PRR5LQ6MZQ0 368 aa17.11■□□□□ 0.33
MUC1-229ENST00000620770 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
MUC1-229ENST00000620770 PPP1R42Q7Z4L9 355 aa17.11■□□□□ 0.33
MUC1-229ENST00000620770 CWC25Q9NXE8 425 aaPredicted RBP17.11■□□□□ 0.33
MUC1-229ENST00000620770 TRMT112Q9UI30 125 aaKnown RBP17.11■□□□□ 0.33
MUC1-229ENST00000620770 ST5P78524 1137 aa17.1■□□□□ 0.33
MUC1-229ENST00000620770 BEND3Q5T5X7 828 aa17.1■□□□□ 0.33
MUC1-229ENST00000620770 LINS1Q8NG48 757 aa17.1■□□□□ 0.33
MUC1-229ENST00000620770 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
MUC1-229ENST00000620770 SRCIN1Q9C0H9 1055 aa17.1■□□□□ 0.33
MUC1-229ENST00000620770 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
MUC1-229ENST00000620770 GPBP1L1Q9HC44 474 aaPredicted RBP17.1■□□□□ 0.33
MUC1-229ENST00000620770 ERFEQ4G0M1 354 aa17.09■□□□□ 0.33
MUC1-229ENST00000620770 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
MUC1-229ENST00000620770 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
MUC1-229ENST00000620770 CCDC191Q8NCU4 936 aa17.09■□□□□ 0.33
MUC1-229ENST00000620770 ARHGAP45Q92619 1136 aa17.09■□□□□ 0.33
MUC1-229ENST00000620770 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
MUC1-229ENST00000620770 IBTKQ9P2D0 1353 aaPredicted RBP17.08■□□□□ 0.32
MUC1-229ENST00000620770 TRIM28Q13263 835 aaKnown RBP17.08■□□□□ 0.32
MUC1-229ENST00000620770 SYNE4Q8N205 404 aa17.08■□□□□ 0.32
MUC1-229ENST00000620770 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
MUC1-229ENST00000620770 PIM2Q9P1W9 311 aa17.08■□□□□ 0.32
MUC1-229ENST00000620770 ABCC4O15439 1325 aa17.07■□□□□ 0.32
MUC1-229ENST00000620770 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
MUC1-229ENST00000620770 GCKRQ14397 625 aa17.07■□□□□ 0.32
MUC1-229ENST00000620770 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.07■□□□□ 0.32
MUC1-229ENST00000620770 ALDH1L1O75891 902 aa17.06■□□□□ 0.32
MUC1-229ENST00000620770 HCLS1P14317 486 aaPredicted RBP17.06■□□□□ 0.32
MUC1-229ENST00000620770 CCT4P50991 539 aaKnown RBP17.06■□□□□ 0.32
MUC1-229ENST00000620770 UBE3BQ7Z3V4 1068 aa17.06■□□□□ 0.32
MUC1-229ENST00000620770 DZIP1LQ8IYY4 767 aaKnown RBP17.06■□□□□ 0.32
MUC1-229ENST00000620770 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
MUC1-229ENST00000620770 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
MUC1-229ENST00000620770 ANKRD31Q8N7Z5 1873 aa17.05■□□□□ 0.32
MUC1-229ENST00000620770 PCCAP05165 728 aaPredicted RBP17.05■□□□□ 0.32
MUC1-229ENST00000620770 RLBP1P12271 317 aa17.05■□□□□ 0.32
MUC1-229ENST00000620770 KCNA3P22001 575 aa17.05■□□□□ 0.32
MUC1-229ENST00000620770 DALRD3Q5D0E6 543 aaKnown RBP17.05■□□□□ 0.32
MUC1-229ENST00000620770 ARHGAP27Q6ZUM4 889 aa17.05■□□□□ 0.32
MUC1-229ENST00000620770 TMEM57Q8N5G2 664 aa17.05■□□□□ 0.32
MUC1-229ENST00000620770 ZBTB38Q8NAP3 1195 aaPredicted RBP17.05■□□□□ 0.32
MUC1-229ENST00000620770 C9orf78Q9NZ63 289 aaPredicted RBP17.05■□□□□ 0.32
MUC1-229ENST00000620770 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
MUC1-229ENST00000620770 RNF123Q5XPI4 1314 aa17.04■□□□□ 0.32
MUC1-229ENST00000620770 SBF1O95248 1867 aa17.04■□□□□ 0.32
MUC1-229ENST00000620770 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
MUC1-229ENST00000620770 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
MUC1-229ENST00000620770 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
MUC1-229ENST00000620770 GRM8O00222 908 aa17.03■□□□□ 0.32
MUC1-229ENST00000620770 CHRNA5P30532 468 aa17.03■□□□□ 0.32
MUC1-229ENST00000620770 COL11A2P13942 1736 aaPredicted RBP17.02■□□□□ 0.32
MUC1-229ENST00000620770 CACNA1SQ13698 1873 aa17.02■□□□□ 0.32
MUC1-229ENST00000620770 C20orf194Q5TEA3 1177 aa17.02■□□□□ 0.32
MUC1-229ENST00000620770 INTS3Q68E01 1043 aaKnown RBP17.02■□□□□ 0.32
MUC1-229ENST00000620770 C3orf67Q6ZVT6 689 aa17.02■□□□□ 0.32
MUC1-229ENST00000620770 C2CD5Q86YS7 1000 aa17.02■□□□□ 0.32
MUC1-229ENST00000620770 BRIP1Q9BX63 1249 aa17.02■□□□□ 0.32
MUC1-229ENST00000620770 H7C1W4 665 aa17.01■□□□□ 0.31
MUC1-229ENST00000620770 MS4A1P11836 297 aa17.01■□□□□ 0.31
MUC1-229ENST00000620770 PDE6BP35913 854 aa17.01■□□□□ 0.31
MUC1-229ENST00000620770 CDHR2Q9BYE9 1310 aa17■□□□□ 0.31
MUC1-229ENST00000620770 NBPF7P0C2Y1 421 aaPredicted RBP17■□□□□ 0.31
MUC1-229ENST00000620770 CASP7P55210 303 aa17■□□□□ 0.31
MUC1-229ENST00000620770 DDX60Q8IY21 1712 aaKnown RBP17■□□□□ 0.31
MUC1-229ENST00000620770 NLRP3Q96P20 1036 aa17■□□□□ 0.31
MUC1-229ENST00000620770 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
MUC1-229ENST00000620770 SUPT16HQ9Y5B9 1047 aaKnown RBP17■□□□□ 0.31
MUC1-229ENST00000620770 CCDC88AQ3V6T2 1871 aa16.99■□□□□ 0.31
MUC1-229ENST00000620770 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
MUC1-229ENST00000620770 RIC1Q4ADV7 1423 aa16.99■□□□□ 0.31
MUC1-229ENST00000620770 H0YIN7 160 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms