RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 DDX46Q7L014 1031 aaKnown RBP10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 USP48Q86UV5 1035 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 CNNM1Q9NRU3 951 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 CCDC183Q5T5S1 534 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 DDX11Q96FC9 970 aa10.93□□□□□ -0.66
RBFOX1-223ENST00000620507 CCDC171Q6TFL3 1326 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 DIP2AQ14689 1571 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 NPHP4O75161 1426 aaPredicted RBP10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 BECN2A8MW95 431 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 GOLIM4O00461 696 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 NRDCO43847 1150 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 GTF2E1P29083 439 aaPredicted RBP10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 CEBPZQ03701 1054 aaKnown RBP10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 CREB3L3Q68CJ9 461 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 SPATA32Q96LK8 384 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 HMG20BQ9P0W2 317 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 STARD3NLO95772 234 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 POLA2Q14181 598 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 CCDC192P0DO97 292 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 VPS53Q5VIR6 699 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 CCDC73Q6ZRK6 1079 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 MPNDQ8N594 471 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 CNPY2Q9Y2B0 182 aa10.92□□□□□ -0.66
RBFOX1-223ENST00000620507 PHKG2P15735 406 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 TFCP2Q12800 502 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 HSP90AA2PQ14568 343 aaPredicted RBP10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 FAM227BQ96M60 508 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 USP16Q9Y5T5 823 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 ERBB3P21860 1342 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 FAM177BA6PVY3 158 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 SYT1P21579 422 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 UBE2HP62256 183 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 GAS2L3Q86XJ1 694 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 EAF2Q96CJ1 260 aaPredicted RBP10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 NEK1Q96PY6 1258 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 NEURL1BA8MQ27 555 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 BRD1O95696 1058 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 CLCN1P35523 988 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 HSPA2P54652 639 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 RUFY3Q7L099 469 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 AXIN2Q9Y2T1 843 aa10.91□□□□□ -0.66
RBFOX1-223ENST00000620507 TNMDQ9H2S6 317 aa10.9□□□□□ -0.66
RBFOX1-223ENST00000620507 AKAP2Q9Y2D5 859 aa10.9□□□□□ -0.66
RBFOX1-223ENST00000620507 R3HCC1Q9Y3T6 440 aaKnown RBP10.9□□□□□ -0.66
RBFOX1-223ENST00000620507 NRKQ7Z2Y5 1582 aa10.9□□□□□ -0.66
RBFOX1-223ENST00000620507 CEP170BQ9Y4F5 1589 aaPredicted RBP10.9□□□□□ -0.66
RBFOX1-223ENST00000620507 F13A1P00488 732 aa10.9□□□□□ -0.66
RBFOX1-223ENST00000620507 SCAND2PQ9GZW5 306 aaPredicted RBP10.9□□□□□ -0.66
RBFOX1-223ENST00000620507 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
RBFOX1-223ENST00000620507 ADGRL3Q9HAR2 1447 aa10.9□□□□□ -0.66
RBFOX1-223ENST00000620507 ZNF445P59923 1031 aa10.9□□□□□ -0.67
RBFOX1-223ENST00000620507 CHAMP1Q96JM3 812 aa10.9□□□□□ -0.67
RBFOX1-223ENST00000620507 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.9□□□□□ -0.67
RBFOX1-223ENST00000620507 RRAGDQ9NQL2 400 aaPredicted RBP10.9□□□□□ -0.67
RBFOX1-223ENST00000620507 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.67
RBFOX1-223ENST00000620507 IFIT5Q13325 482 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 SYNE3Q6ZMZ3 975 aa10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 NUP62CLQ9H1M0 184 aa10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 DHX16O60231 1041 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 HMGB1P09429 215 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 NFXL1Q6ZNB6 911 aa10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 PLBD2Q8NHP8 589 aa10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 PI4K2BQ8TCG2 481 aa10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 CFAP45Q9UL16 551 aa10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 MCMDC2Q4G0Z9 681 aa10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 TFIP11Q9UBB9 837 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-223ENST00000620507 IL15P40933 162 aaPredicted RBP10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 PTH1RQ03431 593 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 DNM1Q05193 864 aaKnown RBP10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 SNRKQ9NRH2 765 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 IL2RBP14784 551 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 TPM4P67936 248 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 TNNI3KQ59H18 835 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 LSG1Q9H089 658 aaKnown RBP10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 FPGT-TNNI3KV9GXZ4 949 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 CUL4AQ13619 759 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 TRIM29Q14134 588 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 CAMK4Q16566 473 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 SDF4Q9BRK5 362 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 RBSNQ9H1K0 784 aa10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.67
RBFOX1-223ENST00000620507 KINO60870 393 aaKnown RBP10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 GPTP24298 496 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 MAP3K11Q16584 847 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 IMMTQ16891 758 aaKnown RBP10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 BRF1Q92994 677 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 ZNF396Q96N95 335 aaPredicted RBP10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 DBNDD2Q9BQY9 259 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 PCDH11XQ9BZA7 1347 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 PCDH11YQ9BZA8 1340 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 RGS12O14924 1447 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 DTNBO60941 627 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 TEX13AQ9BXU3 409 aaPredicted RBP10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 TMEM63CQ9P1W3 806 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 USP25Q9UHP3 1055 aa10.87□□□□□ -0.67
RBFOX1-223ENST00000620507 TMEM94Q12767 1356 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms