RNA–Protein interactions for RNA: ENST00000620412.4

PMPCA-210, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-210ENST00000620412 DPY19L2Q6NUT2 758 aa27.53■■■□□ 2
PMPCA-210ENST00000620412 GIGYF2Q6Y7W6 1299 aaKnown RBP27.53■■■□□ 2
PMPCA-210ENST00000620412 TTLL7Q6ZT98 887 aa27.53■■■□□ 2
PMPCA-210ENST00000620412 TSPYL6Q8N831 410 aa27.53■■■□□ 2
PMPCA-210ENST00000620412 SMC1BQ8NDV3 1235 aa27.53■■■□□ 2
PMPCA-210ENST00000620412 NPR1P16066 1061 aa27.52■■■□□ 2
PMPCA-210ENST00000620412 GTF2E1P29083 439 aaPredicted RBP27.52■■■□□ 2
PMPCA-210ENST00000620412 COL11A2P13942 1736 aaPredicted RBP27.51■■□□□ 1.99
PMPCA-210ENST00000620412 SOGA3Q5TF21 947 aa27.51■■□□□ 1.99
PMPCA-210ENST00000620412 LTBP3Q9NS15 1303 aa27.5■■□□□ 1.99
PMPCA-210ENST00000620412 KLRG2A4D1S0 409 aaPredicted RBP27.5■■□□□ 1.99
PMPCA-210ENST00000620412 C7orf43Q8WVR3 580 aa27.5■■□□□ 1.99
PMPCA-210ENST00000620412 NECTIN2Q92692 538 aa27.5■■□□□ 1.99
PMPCA-210ENST00000620412 RIC1Q4ADV7 1423 aa27.5■■□□□ 1.99
PMPCA-210ENST00000620412 POTECB2RU33 542 aa27.49■■□□□ 1.99
PMPCA-210ENST00000620412 ELL2O00472 640 aaPredicted RBP27.49■■□□□ 1.99
PMPCA-210ENST00000620412 COPS6Q7L5N1 327 aa27.49■■□□□ 1.99
PMPCA-210ENST00000620412 ANXA1P04083 346 aa27.48■■□□□ 1.99
PMPCA-210ENST00000620412 SLFN5Q08AF3 891 aa27.48■■□□□ 1.99
PMPCA-210ENST00000620412 HSP90AB3PQ58FF7 597 aa27.48■■□□□ 1.99
PMPCA-210ENST00000620412 XAGE3Q8WTP9 111 aa27.48■■□□□ 1.99
PMPCA-210ENST00000620412 VAMP4O75379 141 aa27.47■■□□□ 1.99
PMPCA-210ENST00000620412 EXOSC9Q06265 439 aaKnown RBP27.47■■□□□ 1.99
PMPCA-210ENST00000620412 CCDC93Q567U6 631 aa27.47■■□□□ 1.99
PMPCA-210ENST00000620412 OLFM4Q6UX06 510 aa27.47■■□□□ 1.99
PMPCA-210ENST00000620412 TRMT2AQ8IZ69 625 aaKnown RBP27.47■■□□□ 1.99
PMPCA-210ENST00000620412 PLBD2Q8NHP8 589 aa27.47■■□□□ 1.99
PMPCA-210ENST00000620412 ZBTB3Q9H5J0 574 aa27.47■■□□□ 1.99
PMPCA-210ENST00000620412 RNF123Q5XPI4 1314 aa27.46■■□□□ 1.99
PMPCA-210ENST00000620412 GPTP24298 496 aa27.46■■□□□ 1.99
PMPCA-210ENST00000620412 NUTM1Q86Y26 1132 aa27.46■■□□□ 1.99
PMPCA-210ENST00000620412 ZNF34Q8IZ26 560 aa27.46■■□□□ 1.99
PMPCA-210ENST00000620412 STK31Q9BXU1 1019 aa27.46■■□□□ 1.99
PMPCA-210ENST00000620412 TNRC6CQ9HCJ0 1690 aaKnown RBP27.46■■□□□ 1.99
PMPCA-210ENST00000620412 DDNO94850 711 aaPredicted RBP27.45■■□□□ 1.98
PMPCA-210ENST00000620412 PARP10Q53GL7 1025 aa27.45■■□□□ 1.98
PMPCA-210ENST00000620412 SLX4Q8IY92 1834 aa27.45■■□□□ 1.98
PMPCA-210ENST00000620412 ZNF428Q96B54 188 aa27.44■■□□□ 1.98
PMPCA-210ENST00000620412 NYXQ9GZU5 481 aa27.44■■□□□ 1.98
PMPCA-210ENST00000620412 ANKRD13DQ6ZTN6 518 aa27.43■■□□□ 1.98
PMPCA-210ENST00000620412 KLRG1Q96E93 195 aa27.43■■□□□ 1.98
PMPCA-210ENST00000620412 UBN2Q6ZU65 1347 aa27.42■■□□□ 1.98
PMPCA-210ENST00000620412 ALDH1B1P30837 517 aa27.42■■□□□ 1.98
PMPCA-210ENST00000620412 IFFO2Q5TF58 517 aa27.42■■□□□ 1.98
PMPCA-210ENST00000620412 ZNF277Q9NRM2 450 aaPredicted RBP27.42■■□□□ 1.98
PMPCA-210ENST00000620412 CT47B1P0C2W7 299 aaPredicted RBP27.41■■□□□ 1.98
PMPCA-210ENST00000620412 FKBP4Q02790 459 aaKnown RBP eCLIP27.41■■□□□ 1.98
PMPCA-210ENST00000620412 AIMP1Q12904 312 aaKnown RBP27.41■■□□□ 1.98
PMPCA-210ENST00000620412 TIAM2Q8IVF5 1701 aa27.41■■□□□ 1.98
PMPCA-210ENST00000620412 LAMB2P55268 1798 aa27.4■■□□□ 1.98
PMPCA-210ENST00000620412 ABCC12Q96J65 1359 aa27.4■■□□□ 1.98
PMPCA-210ENST00000620412 DDX58O95786 925 aaKnown RBP27.4■■□□□ 1.98
PMPCA-210ENST00000620412 TCIRG1Q13488 830 aa27.4■■□□□ 1.98
PMPCA-210ENST00000620412 SUSD4Q5VX71 490 aa27.4■■□□□ 1.98
PMPCA-210ENST00000620412 FER1L6Q2WGJ9 1857 aa27.39■■□□□ 1.98
PMPCA-210ENST00000620412 RTKN2Q8IZC4 609 aa27.39■■□□□ 1.98
PMPCA-210ENST00000620412 PHAXQ9H814 394 aaKnown RBP27.39■■□□□ 1.98
PMPCA-210ENST00000620412 TRIM28Q13263 835 aaKnown RBP27.38■■□□□ 1.97
PMPCA-210ENST00000620412 CRY2Q49AN0 593 aa27.38■■□□□ 1.97
PMPCA-210ENST00000620412 PPP1R42Q7Z4L9 355 aa27.38■■□□□ 1.97
PMPCA-210ENST00000620412 CCDC88AQ3V6T2 1871 aa27.38■■□□□ 1.97
PMPCA-210ENST00000620412 ZBED9Q6R2W3 1325 aa27.38■■□□□ 1.97
PMPCA-210ENST00000620412 WDR90Q96KV7 1748 aa27.36■■□□□ 1.97
PMPCA-210ENST00000620412 NTSR2O95665 410 aa27.36■■□□□ 1.97
PMPCA-210ENST00000620412 SLC4A2P04920 1241 aa27.36■■□□□ 1.97
PMPCA-210ENST00000620412 HNRNPUQ00839 825 aaKnown RBP eCLIP27.36■■□□□ 1.97
PMPCA-210ENST00000620412 SYNE4Q8N205 404 aa27.36■■□□□ 1.97
PMPCA-210ENST00000620412 RPGRQ92834 1020 aaKnown RBP27.36■■□□□ 1.97
PMPCA-210ENST00000620412 ISCA1Q9BUE6 129 aa27.36■■□□□ 1.97
PMPCA-210ENST00000620412 POTEIP0CG38 1075 aa27.35■■□□□ 1.97
PMPCA-210ENST00000620412 POTEJP0CG39 1038 aa27.35■■□□□ 1.97
PMPCA-210ENST00000620412 CDCA7LQ96GN5 454 aa27.35■■□□□ 1.97
PMPCA-210ENST00000620412 NLRP10Q86W26 655 aa27.34■■□□□ 1.97
PMPCA-210ENST00000620412 DDX60Q8IY21 1712 aaKnown RBP27.33■■□□□ 1.97
PMPCA-210ENST00000620412 FLIIQ13045 1269 aa27.33■■□□□ 1.97
PMPCA-210ENST00000620412 CHADLQ6NUI6 762 aa27.33■■□□□ 1.97
PMPCA-210ENST00000620412 KSR2Q6VAB6 950 aa27.33■■□□□ 1.97
PMPCA-210ENST00000620412 RIC3Q7Z5B4 369 aa27.33■■□□□ 1.97
PMPCA-210ENST00000620412 JMYQ8N9B5 988 aa27.33■■□□□ 1.97
PMPCA-210ENST00000620412 ZNF541Q9H0D2 1346 aa27.33■■□□□ 1.97
PMPCA-210ENST00000620412 TCERG1O14776 1098 aaKnown RBP27.32■■□□□ 1.96
PMPCA-210ENST00000620412 IARSP41252 1262 aaKnown RBP27.32■■□□□ 1.96
PMPCA-210ENST00000620412 C3orf67Q6ZVT6 689 aa27.32■■□□□ 1.96
PMPCA-210ENST00000620412 CACNA1SQ13698 1873 aa27.32■■□□□ 1.96
PMPCA-210ENST00000620412 HOXA10P31260 410 aaPredicted RBP27.31■■□□□ 1.96
PMPCA-210ENST00000620412 ALDH1L2Q3SY69 923 aa27.31■■□□□ 1.96
PMPCA-210ENST00000620412 RBM17Q96I25 401 aaKnown RBP27.31■■□□□ 1.96
PMPCA-210ENST00000620412 METTL22Q9BUU2 404 aaPredicted RBP27.31■■□□□ 1.96
PMPCA-210ENST00000620412 UTP14AQ9BVJ6 771 aaKnown RBP27.31■■□□□ 1.96
PMPCA-210ENST00000620412 IQCA1LA6NCM1 817 aa27.3■■□□□ 1.96
PMPCA-210ENST00000620412 L3MBTL3Q96JM7 780 aaPredicted RBP27.3■■□□□ 1.96
PMPCA-210ENST00000620412 SLC10A5Q5PT55 438 aa27.29■■□□□ 1.96
PMPCA-210ENST00000620412 SLC51AQ86UW1 340 aa27.29■■□□□ 1.96
PMPCA-210ENST00000620412 TAF1DQ9H5J8 278 aaPredicted RBP27.29■■□□□ 1.96
PMPCA-210ENST00000620412 PI4KAP2A4QPH2 592 aa27.28■■□□□ 1.96
PMPCA-210ENST00000620412 CC2D2BQ6DHV5 1058 aa27.28■■□□□ 1.96
PMPCA-210ENST00000620412 G2E3Q7L622 706 aa27.28■■□□□ 1.96
PMPCA-210ENST00000620412 PI4KAP1Q8N8J0 262 aa27.28■■□□□ 1.96
PMPCA-210ENST00000620412 CCDC191Q8NCU4 936 aa27.28■■□□□ 1.96
PMPCA-210ENST00000620412 CRAMP1Q96RY5 1269 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms