RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 PRR36Q9H6K5 1346 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 OVOS2A0A0J9YW53 1432 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 OVOS2Q6IE36 1432 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 DDX54Q8TDD1 881 aaKnown RBP10.28□□□□□ -0.76
C9orf72-206ENST00000619707 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 PEAK1Q9H792 1746 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 METP08581 1390 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 KIF18AQ8NI77 898 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 BICD2Q8TD16 824 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 CACTINQ8WUQ7 758 aaKnown RBP10.28□□□□□ -0.76
C9orf72-206ENST00000619707 TPCN1Q9ULQ1 816 aa10.28□□□□□ -0.76
C9orf72-206ENST00000619707 MORC2Q9Y6X9 1032 aaPredicted RBP10.28□□□□□ -0.76
C9orf72-206ENST00000619707 RIMS1Q86UR5 1692 aaKnown RBP10.27□□□□□ -0.76
C9orf72-206ENST00000619707 DNAJC25Q9H1X3 360 aa10.27□□□□□ -0.76
C9orf72-206ENST00000619707 TFIP11Q9UBB9 837 aaKnown RBP10.27□□□□□ -0.76
C9orf72-206ENST00000619707 HTATSF1O43719 755 aaKnown RBP10.27□□□□□ -0.77
C9orf72-206ENST00000619707 FAM43BQ6ZT52 329 aaPredicted RBP10.27□□□□□ -0.77
C9orf72-206ENST00000619707 KRT222Q8N1A0 295 aa10.27□□□□□ -0.77
C9orf72-206ENST00000619707 GPATCH3Q96I76 525 aa10.27□□□□□ -0.77
C9orf72-206ENST00000619707 ACEP12821 1306 aa10.27□□□□□ -0.77
C9orf72-206ENST00000619707 CACNA1FO60840 1977 aa10.27□□□□□ -0.77
C9orf72-206ENST00000619707 N4BP2Q86UW6 1770 aaPredicted RBP10.27□□□□□ -0.77
C9orf72-206ENST00000619707 USP42Q9H9J4 1324 aaKnown RBP10.27□□□□□ -0.77
C9orf72-206ENST00000619707 GOLGA6L19H0YKK7 550 aa10.27□□□□□ -0.77
C9orf72-206ENST00000619707 PSMA5P28066 241 aa10.27□□□□□ -0.77
C9orf72-206ENST00000619707 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
C9orf72-206ENST00000619707 RBM43Q6ZSC3 357 aaKnown RBP10.27□□□□□ -0.77
C9orf72-206ENST00000619707 ZNF397Q8NF99 534 aaPredicted RBP10.27□□□□□ -0.77
C9orf72-206ENST00000619707 KCNB2Q92953 911 aa10.27□□□□□ -0.77
C9orf72-206ENST00000619707 RICTORQ6R327 1708 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 GNAT3A8MTJ3 354 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 CAVIN2O95810 425 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 CDC25BP30305 580 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 CLASRPQ8N2M8 674 aaKnown RBP10.26□□□□□ -0.77
C9orf72-206ENST00000619707 LEO1Q8WVC0 666 aaPredicted RBP10.26□□□□□ -0.77
C9orf72-206ENST00000619707 RBM8AQ9Y5S9 174 aaKnown RBP10.26□□□□□ -0.77
C9orf72-206ENST00000619707 NEMFO60524 1076 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 SLFN14P0C7P3 912 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 NECTIN1Q15223 517 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 ANKRD1Q15327 319 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 PTPN14Q15678 1187 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 CCDC144BQ3MJ40 725 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 CREB3L3Q68CJ9 461 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 CCDC144CPQ8IYA2 1237 aa10.26□□□□□ -0.77
C9orf72-206ENST00000619707 PHAXQ9H814 394 aaKnown RBP10.26□□□□□ -0.77
C9orf72-206ENST00000619707 KDRP35968 1356 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 ECHDC1Q9NTX5 307 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 CCDC66A2RUB6 948 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 NR1I2O75469 434 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 NBPF7P0C2Y1 421 aaPredicted RBP10.25□□□□□ -0.77
C9orf72-206ENST00000619707 TICAM2Q86XR7 235 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 LRRC8AQ8IWT6 810 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 SIRT1Q96EB6 747 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 CRYBG1Q9Y4K1 1723 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 FLT4P35916 1363 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 USP31Q70CQ4 1352 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 LARP1Q6PKG0 1096 aaKnown RBP10.25□□□□□ -0.77
C9orf72-206ENST00000619707 BLOC1S2Q6QNY1 142 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 EVI5LQ96CN4 794 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 EYA1Q99502 592 aa10.25□□□□□ -0.77
C9orf72-206ENST00000619707 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
C9orf72-206ENST00000619707 IFIT2P09913 472 aaKnown RBP10.24□□□□□ -0.77
C9orf72-206ENST00000619707 AMPHP49418 695 aa10.24□□□□□ -0.77
C9orf72-206ENST00000619707 TAF7Q15545 349 aaPredicted RBP10.24□□□□□ -0.77
C9orf72-206ENST00000619707 TERF2Q15554 542 aa10.24□□□□□ -0.77
C9orf72-206ENST00000619707 ZNF215Q9UL58 517 aaPredicted RBP10.24□□□□□ -0.77
C9orf72-206ENST00000619707 ADGRL3Q9HAR2 1447 aa10.24□□□□□ -0.77
C9orf72-206ENST00000619707 KMT5BQ4FZB7 885 aa10.24□□□□□ -0.77
C9orf72-206ENST00000619707 RNF20Q5VTR2 975 aa10.24□□□□□ -0.77
C9orf72-206ENST00000619707 USP6P35125 1406 aa10.24□□□□□ -0.77
C9orf72-206ENST00000619707 SBNO1A3KN83 1393 aa10.24□□□□□ -0.77
C9orf72-206ENST00000619707 IGSF1Q8N6C5 1336 aa10.24□□□□□ -0.77
C9orf72-206ENST00000619707 SKILP12757 684 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 NALCNQ8IZF0 1738 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.23□□□□□ -0.77
C9orf72-206ENST00000619707 V9GYY5 206 aaPredicted RBP10.23□□□□□ -0.77
C9orf72-206ENST00000619707 CHD2O14647 1828 aaKnown RBP10.23□□□□□ -0.77
C9orf72-206ENST00000619707 USP27XA6NNY8 438 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 HIP1O00291 1037 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 SLC27A2O14975 620 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 RBM6P78332 1123 aaKnown RBP10.23□□□□□ -0.77
C9orf72-206ENST00000619707 SARM1Q6SZW1 724 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 ERO1AQ96HE7 468 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 MRFAP1L1Q96HT8 127 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 TCEANC2Q96MN5 208 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 LRRC37A3O60309 1634 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 NRXN3Q9Y4C0 1643 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 FMN2Q9NZ56 1722 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 CEP170BQ9Y4F5 1589 aaPredicted RBP10.23□□□□□ -0.77
C9orf72-206ENST00000619707 TECPR2O15040 1411 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 BECN2A8MW95 431 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 STK3Q13188 491 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 MAP4K1Q92918 833 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 PGBD1Q96JS3 809 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 BABAM1Q9NWV8 329 aa10.23□□□□□ -0.77
C9orf72-206ENST00000619707 EIF2S2P20042 333 aaKnown RBP10.22□□□□□ -0.77
C9orf72-206ENST00000619707 NYAP1Q6ZVC0 841 aa10.22□□□□□ -0.77
C9orf72-206ENST00000619707 DNAAF4Q8WXU2 420 aa10.22□□□□□ -0.77
C9orf72-206ENST00000619707 PLEKHG3A1L390 1219 aa10.22□□□□□ -0.77
C9orf72-206ENST00000619707 RPS6KB1P23443 525 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms