RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 CYP19A1P11511 503 aaPredicted RBP24.6■■□□□ 1.53
MMP28-207ENST00000619655 NFKBIBQ15653 356 aa24.6■■□□□ 1.53
MMP28-207ENST00000619655 ANO2Q9NQ90 1003 aa24.6■■□□□ 1.53
MMP28-207ENST00000619655 TLR7Q9NYK1 1049 aaKnown RBP24.6■■□□□ 1.53
MMP28-207ENST00000619655 TJP1Q07157 1748 aa24.6■■□□□ 1.53
MMP28-207ENST00000619655 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.6■■□□□ 1.53
MMP28-207ENST00000619655 NWD2Q9ULI1 1742 aa24.6■■□□□ 1.53
MMP28-207ENST00000619655 RFX5P48382 616 aaPredicted RBP24.6■■□□□ 1.53
MMP28-207ENST00000619655 SNX21Q969T3 373 aa24.6■■□□□ 1.53
MMP28-207ENST00000619655 FAM98CQ17RN3 349 aaKnown RBP24.59■■□□□ 1.53
MMP28-207ENST00000619655 COPRSQ9NQ92 184 aa24.59■■□□□ 1.53
MMP28-207ENST00000619655 ZBTB1Q9Y2K1 713 aa24.59■■□□□ 1.53
MMP28-207ENST00000619655 USP42Q9H9J4 1324 aaKnown RBP24.59■■□□□ 1.53
MMP28-207ENST00000619655 FOXO4P98177 505 aa24.58■■□□□ 1.53
MMP28-207ENST00000619655 TCIRG1Q13488 830 aa24.58■■□□□ 1.53
MMP28-207ENST00000619655 ANTXR1Q9H6X2 564 aa24.58■■□□□ 1.53
MMP28-207ENST00000619655 COL15A1P39059 1388 aa24.57■■□□□ 1.52
MMP28-207ENST00000619655 IL25Q9H293 177 aa24.57■■□□□ 1.52
MMP28-207ENST00000619655 TFCP2Q12800 502 aa24.56■■□□□ 1.52
MMP28-207ENST00000619655 HLFQ16534 295 aa24.56■■□□□ 1.52
MMP28-207ENST00000619655 BARGINQ6ZT62 677 aa24.56■■□□□ 1.52
MMP28-207ENST00000619655 ISCA1Q9BUE6 129 aa24.56■■□□□ 1.52
MMP28-207ENST00000619655 GPTP24298 496 aa24.55■■□□□ 1.52
MMP28-207ENST00000619655 RABEP1Q15276 862 aa24.55■■□□□ 1.52
MMP28-207ENST00000619655 MAP3K15Q6ZN16 1313 aa24.55■■□□□ 1.52
MMP28-207ENST00000619655 JCADQ9P266 1359 aa24.54■■□□□ 1.52
MMP28-207ENST00000619655 HSP90AA1P07900 732 aaKnown RBP24.53■■□□□ 1.52
MMP28-207ENST00000619655 CWC27Q6UX04 472 aaKnown RBP24.53■■□□□ 1.52
MMP28-207ENST00000619655 FAM89AQ96GI7 184 aa24.53■■□□□ 1.52
MMP28-207ENST00000619655 FOXD4L1Q9NU39 408 aa24.53■■□□□ 1.52
MMP28-207ENST00000619655 FRAT2O75474 233 aaPredicted RBP24.53■■□□□ 1.52
MMP28-207ENST00000619655 K7ELQ4 463 aaPredicted RBP24.52■■□□□ 1.52
MMP28-207ENST00000619655 ATP6V1AP38606 617 aa24.52■■□□□ 1.52
MMP28-207ENST00000619655 CCDC85AQ96PX6 553 aaPredicted RBP24.52■■□□□ 1.52
MMP28-207ENST00000619655 BOLA2Q9H3K6 86 aa24.52■■□□□ 1.52
MMP28-207ENST00000619655 TBC1D2BQ9UPU7 963 aa24.52■■□□□ 1.52
MMP28-207ENST00000619655 GIGYF2Q6Y7W6 1299 aaKnown RBP24.52■■□□□ 1.52
MMP28-207ENST00000619655 KCNQ2O43526 872 aa24.51■■□□□ 1.51
MMP28-207ENST00000619655 ZNF594Q96JF6 807 aaPredicted RBP24.51■■□□□ 1.51
MMP28-207ENST00000619655 DEKP35659 375 aaKnown RBP24.51■■□□□ 1.51
MMP28-207ENST00000619655 TNNI3KQ59H18 835 aa24.51■■□□□ 1.51
MMP28-207ENST00000619655 FPGT-TNNI3KV9GXZ4 949 aa24.51■■□□□ 1.51
MMP28-207ENST00000619655 MCCP23508 829 aa24.5■■□□□ 1.51
MMP28-207ENST00000619655 DIAPH3Q9NSV4 1193 aa24.5■■□□□ 1.51
MMP28-207ENST00000619655 BCL9LQ86UU0 1499 aa24.5■■□□□ 1.51
MMP28-207ENST00000619655 DZIP3Q86Y13 1208 aaKnown RBP24.5■■□□□ 1.51
MMP28-207ENST00000619655 SYNE4Q8N205 404 aa24.49■■□□□ 1.51
MMP28-207ENST00000619655 LOC102724428A0A0B4J2F2 783 aa24.49■■□□□ 1.51
MMP28-207ENST00000619655 SIK1P57059 783 aa24.49■■□□□ 1.51
MMP28-207ENST00000619655 DBNLQ9UJU6 430 aaKnown RBP24.49■■□□□ 1.51
MMP28-207ENST00000619655 PALD1Q9ULE6 856 aa24.49■■□□□ 1.51
MMP28-207ENST00000619655 EVI5LQ96CN4 794 aa24.48■■□□□ 1.51
MMP28-207ENST00000619655 SGSM2O43147 1006 aa24.47■■□□□ 1.51
MMP28-207ENST00000619655 IL6STP40189 918 aaPredicted RBP24.47■■□□□ 1.51
MMP28-207ENST00000619655 TRIM28Q13263 835 aaKnown RBP24.47■■□□□ 1.51
MMP28-207ENST00000619655 VPS72Q15906 364 aa24.47■■□□□ 1.51
MMP28-207ENST00000619655 ZBTB38Q8NAP3 1195 aaPredicted RBP24.47■■□□□ 1.51
MMP28-207ENST00000619655 PALLDQ8WX93 1383 aa24.46■■□□□ 1.51
MMP28-207ENST00000619655 PCCAP05165 728 aaPredicted RBP24.46■■□□□ 1.51
MMP28-207ENST00000619655 LRRC24Q50LG9 513 aa24.46■■□□□ 1.51
MMP28-207ENST00000619655 ST18O60284 1047 aa24.46■■□□□ 1.51
MMP28-207ENST00000619655 CRKLP46109 303 aaKnown RBP24.46■■□□□ 1.51
MMP28-207ENST00000619655 CCDC57Q2TAC2 916 aa24.46■■□□□ 1.51
MMP28-207ENST00000619655 ATG9AQ7Z3C6 839 aa24.46■■□□□ 1.51
MMP28-207ENST00000619655 NLRP10Q86W26 655 aa24.46■■□□□ 1.51
MMP28-207ENST00000619655 DBNDD2Q9BQY9 259 aa24.46■■□□□ 1.51
MMP28-207ENST00000619655 USP21Q9UK80 565 aa24.46■■□□□ 1.51
MMP28-207ENST00000619655 HSP90AB3PQ58FF7 597 aa24.45■■□□□ 1.51
MMP28-207ENST00000619655 NEUROD6Q96NK8 337 aa24.45■■□□□ 1.51
MMP28-207ENST00000619655 CHMP5Q9NZZ3 219 aa24.45■■□□□ 1.51
MMP28-207ENST00000619655 ITPK1Q13572 414 aa24.45■■□□□ 1.5
MMP28-207ENST00000619655 CCDC87Q9NVE4 849 aa24.45■■□□□ 1.5
MMP28-207ENST00000619655 NDUFB9Q9Y6M9 179 aa24.45■■□□□ 1.5
MMP28-207ENST00000619655 INTS5Q6P9B9 1019 aaKnown RBP24.44■■□□□ 1.5
MMP28-207ENST00000619655 KIAA1211Q6ZU35 1233 aa24.44■■□□□ 1.5
MMP28-207ENST00000619655 EDC3Q96F86 508 aaKnown RBP24.44■■□□□ 1.5
MMP28-207ENST00000619655 FSD1Q9BTV5 496 aa24.44■■□□□ 1.5
MMP28-207ENST00000619655 PUS3Q9BZE2 481 aaKnown RBP24.44■■□□□ 1.5
MMP28-207ENST00000619655 NUP98P52948 1817 aa24.44■■□□□ 1.5
MMP28-207ENST00000619655 NEK4P51957 841 aa24.43■■□□□ 1.5
MMP28-207ENST00000619655 TRMT112Q9UI30 125 aaKnown RBP24.43■■□□□ 1.5
MMP28-207ENST00000619655 EYA2O00167 538 aa24.43■■□□□ 1.5
MMP28-207ENST00000619655 RUFY2Q8WXA3 655 aa24.43■■□□□ 1.5
MMP28-207ENST00000619655 IL15P40933 162 aaPredicted RBP24.42■■□□□ 1.5
MMP28-207ENST00000619655 TAF7LQ5H9L4 462 aa24.42■■□□□ 1.5
MMP28-207ENST00000619655 ANKRD36CQ5JPF3 1778 aa24.41■■□□□ 1.5
MMP28-207ENST00000619655 TIMM10P62072 90 aa24.41■■□□□ 1.5
MMP28-207ENST00000619655 FNBP4Q8N3X1 1017 aaPredicted RBP24.41■■□□□ 1.5
MMP28-207ENST00000619655 DNAJC2Q99543 621 aaKnown RBP24.41■■□□□ 1.5
MMP28-207ENST00000619655 RAD50Q92878 1312 aa24.41■■□□□ 1.5
MMP28-207ENST00000619655 FAM177BA6PVY3 158 aa24.41■■□□□ 1.5
MMP28-207ENST00000619655 EIF5P55010 431 aaKnown RBP24.41■■□□□ 1.5
MMP28-207ENST00000619655 MEX3CQ5U5Q3 659 aaKnown RBP24.41■■□□□ 1.5
MMP28-207ENST00000619655 FAM227BQ96M60 508 aa24.41■■□□□ 1.5
MMP28-207ENST00000619655 LSG1Q9H089 658 aaKnown RBP24.41■■□□□ 1.5
MMP28-207ENST00000619655 KCNQ4P56696 695 aa24.4■■□□□ 1.5
MMP28-207ENST00000619655 ERVV-1B6SEH8 477 aa24.4■■□□□ 1.5
MMP28-207ENST00000619655 FAM182BQ5T319 152 aa24.4■■□□□ 1.5
MMP28-207ENST00000619655 UBN2Q6ZU65 1347 aa24.4■■□□□ 1.5
MMP28-207ENST00000619655 ATP5JP18859 108 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms