RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 SNRPA1P09661 255 aaKnown RBP36.11■■■■□ 3.37
KHSRP-213ENST00000619396 KCNB2Q92953 911 aa36.11■■■■□ 3.37
KHSRP-213ENST00000619396 TSPY26PQ9H489 355 aa36.11■■■■□ 3.37
KHSRP-213ENST00000619396 UTYO14607 1347 aa36.11■■■■□ 3.37
KHSRP-213ENST00000619396 PTH1RQ03431 593 aa36.1■■■■□ 3.37
KHSRP-213ENST00000619396 ERC1Q8IUD2 1116 aa36.1■■■■□ 3.37
KHSRP-213ENST00000619396 JARID2Q92833 1246 aaPredicted RBP36.1■■■■□ 3.37
KHSRP-213ENST00000619396 SLAIN2Q9P270 581 aa36.1■■■■□ 3.37
KHSRP-213ENST00000619396 ZSCAN22P10073 491 aaPredicted RBP36.1■■■■□ 3.37
KHSRP-213ENST00000619396 LARP1Q6PKG0 1096 aaKnown RBP36.1■■■■□ 3.37
KHSRP-213ENST00000619396 HDAC5Q9UQL6 1122 aa36.1■■■■□ 3.37
KHSRP-213ENST00000619396 NEURL1BA8MQ27 555 aa36.09■■■■□ 3.37
KHSRP-213ENST00000619396 TOM1L2Q6ZVM7 507 aa36.09■■■■□ 3.37
KHSRP-213ENST00000619396 LARP6Q9BRS8 491 aaKnown RBP36.08■■■■□ 3.37
KHSRP-213ENST00000619396 ZSCAN21Q9Y5A6 473 aaPredicted RBP36.08■■■■□ 3.37
KHSRP-213ENST00000619396 FMNL2Q96PY5 1086 aa36.08■■■■□ 3.37
KHSRP-213ENST00000619396 ZNF500O60304 480 aaPredicted RBP36.07■■■■□ 3.36
KHSRP-213ENST00000619396 CPA1P15085 419 aa36.07■■■■□ 3.36
KHSRP-213ENST00000619396 CASTP20810 708 aaKnown RBP36.07■■■■□ 3.36
KHSRP-213ENST00000619396 SYT1P21579 422 aa36.07■■■■□ 3.36
KHSRP-213ENST00000619396 RNF214Q8ND24 703 aa36.07■■■■□ 3.36
KHSRP-213ENST00000619396 IFIT2P09913 472 aaKnown RBP36.06■■■■□ 3.36
KHSRP-213ENST00000619396 KLHDC4Q8TBB5 520 aa36.06■■■■□ 3.36
KHSRP-213ENST00000619396 WDR17Q8IZU2 1322 aa36.06■■■■□ 3.36
KHSRP-213ENST00000619396 STX6O43752 255 aa36.06■■■■□ 3.36
KHSRP-213ENST00000619396 EPHA10Q5JZY3 1008 aa36.06■■■■□ 3.36
KHSRP-213ENST00000619396 GPATCH3Q96I76 525 aa36.06■■■■□ 3.36
KHSRP-213ENST00000619396 METTL22Q9BUU2 404 aaPredicted RBP36.06■■■■□ 3.36
KHSRP-213ENST00000619396 GCKRQ14397 625 aa36.05■■■■□ 3.36
KHSRP-213ENST00000619396 ANKRD13DQ6ZTN6 518 aa36.05■■■■□ 3.36
KHSRP-213ENST00000619396 EVI5LQ96CN4 794 aa36.05■■■■□ 3.36
KHSRP-213ENST00000619396 TM6SF1Q9BZW5 370 aa36.05■■■■□ 3.36
KHSRP-213ENST00000619396 SOS2Q07890 1332 aaPredicted RBP36.05■■■■□ 3.36
KHSRP-213ENST00000619396 TCHHQ07283 1943 aa36.05■■■■□ 3.36
KHSRP-213ENST00000619396 SASH1O94885 1247 aa36.04■■■■□ 3.36
KHSRP-213ENST00000619396 NEXNQ0ZGT2 675 aa36.04■■■■□ 3.36
KHSRP-213ENST00000619396 SIL1Q9H173 461 aa36.04■■■■□ 3.36
KHSRP-213ENST00000619396 PHF14O94880 888 aa36.04■■■■□ 3.36
KHSRP-213ENST00000619396 LARGE1O95461 756 aa36.04■■■■□ 3.36
KHSRP-213ENST00000619396 ADCK5Q3MIX3 580 aa36.04■■■■□ 3.36
KHSRP-213ENST00000619396 VPS53Q5VIR6 699 aa36.04■■■■□ 3.36
KHSRP-213ENST00000619396 ZSWIM6Q9HCJ5 1215 aa36.04■■■■□ 3.36
KHSRP-213ENST00000619396 CNPY2Q9Y2B0 182 aa36.04■■■■□ 3.36
KHSRP-213ENST00000619396 TPM2P07951 284 aa36.03■■■■□ 3.36
KHSRP-213ENST00000619396 SMC3Q9UQE7 1217 aa36.03■■■■□ 3.36
KHSRP-213ENST00000619396 KDM4FA0A1W2PPD8 638 aa36.03■■■■□ 3.36
KHSRP-213ENST00000619396 NECTIN1Q15223 517 aa36.03■■■■□ 3.36
KHSRP-213ENST00000619396 ZKSCAN5Q9Y2L8 839 aa36.03■■■■□ 3.36
KHSRP-213ENST00000619396 PRPF40BQ6NWY9 871 aaKnown RBP36.02■■■■□ 3.36
KHSRP-213ENST00000619396 AACSQ86V21 672 aa36.02■■■■□ 3.36
KHSRP-213ENST00000619396 GLI3P10071 1580 aa36.02■■■■□ 3.36
KHSRP-213ENST00000619396 ZCRB1Q8TBF4 217 aaKnown RBP36.02■■■■□ 3.36
KHSRP-213ENST00000619396 PDRG1Q9NUG6 133 aa36.01■■■■□ 3.36
KHSRP-213ENST00000619396 F13A1P00488 732 aa36■■■■□ 3.35
KHSRP-213ENST00000619396 PDZRN4Q6ZMN7 1036 aaPredicted RBP36■■■■□ 3.35
KHSRP-213ENST00000619396 JAKMIP1Q96N16 626 aaKnown RBP36■■■■□ 3.35
KHSRP-213ENST00000619396 MCM5P33992 734 aa36■■■■□ 3.35
KHSRP-213ENST00000619396 CCDC39Q9UFE4 941 aa36■■■■□ 3.35
KHSRP-213ENST00000619396 COL5A2P05997 1499 aaPredicted RBP36■■■■□ 3.35
KHSRP-213ENST00000619396 ATP5J2-PTCD1G3V325 749 aa35.99■■■■□ 3.35
KHSRP-213ENST00000619396 PTCD1O75127 700 aaKnown RBP35.99■■■■□ 3.35
KHSRP-213ENST00000619396 EAF2Q96CJ1 260 aaPredicted RBP35.99■■■■□ 3.35
KHSRP-213ENST00000619396 ZSCAN31Q96LW9 406 aaPredicted RBP35.99■■■■□ 3.35
KHSRP-213ENST00000619396 STRN4Q9NRL3 753 aa35.99■■■■□ 3.35
KHSRP-213ENST00000619396 CCDC171Q6TFL3 1326 aa35.99■■■■□ 3.35
KHSRP-213ENST00000619396 G3BP1Q13283 466 aaKnown RBP eCLIP35.98■■■■□ 3.353e-7■■□□□ 12.6
KHSRP-213ENST00000619396 CCDC8Q9H0W5 538 aaPredicted RBP35.98■■■■□ 3.35
KHSRP-213ENST00000619396 TLR7Q9NYK1 1049 aaKnown RBP35.98■■■■□ 3.35
KHSRP-213ENST00000619396 CYP46A1Q9Y6A2 500 aa35.98■■■■□ 3.35
KHSRP-213ENST00000619396 PLEKHG2Q9H7P9 1386 aa35.97■■■■□ 3.35
KHSRP-213ENST00000619396 PARP4Q9UKK3 1724 aaKnown RBP35.97■■■■□ 3.35
KHSRP-213ENST00000619396 CCDC183Q5T5S1 534 aa35.96■■■■□ 3.35
KHSRP-213ENST00000619396 CCDC83Q8IWF9 413 aa35.96■■■■□ 3.35
KHSRP-213ENST00000619396 SNRKQ9NRH2 765 aa35.96■■■■□ 3.35
KHSRP-213ENST00000619396 AFDNP55196 1824 aaKnown RBP35.96■■■■□ 3.35
KHSRP-213ENST00000619396 UBE2HP62256 183 aa35.96■■■■□ 3.35
KHSRP-213ENST00000619396 DDX54Q8TDD1 881 aaKnown RBP35.96■■■■□ 3.35
KHSRP-213ENST00000619396 SH2B1Q9NRF2 756 aaPredicted RBP35.96■■■■□ 3.35
KHSRP-213ENST00000619396 PCDH11XQ9BZA7 1347 aa35.96■■■■□ 3.35
KHSRP-213ENST00000619396 PCDH11YQ9BZA8 1340 aa35.96■■■■□ 3.35
KHSRP-213ENST00000619396 ST3GAL1Q11201 340 aa35.95■■■■□ 3.35
KHSRP-213ENST00000619396 GJB2P29033 226 aa35.95■■■■□ 3.34
KHSRP-213ENST00000619396 MAP4K1Q92918 833 aa35.95■■■■□ 3.34
KHSRP-213ENST00000619396 ARFGEF2Q9Y6D5 1785 aa35.94■■■■□ 3.34
KHSRP-213ENST00000619396 NBPF26B4DH59 902 aa35.94■■■■□ 3.34
KHSRP-213ENST00000619396 NBPF14Q5TI25 921 aa35.94■■■■□ 3.34
KHSRP-213ENST00000619396 NBPF10Q6P3W6 841 aaKnown RBP35.94■■■■□ 3.34
KHSRP-213ENST00000619396 NBPF15Q8N660 670 aa35.94■■■■□ 3.34
KHSRP-213ENST00000619396 ATP6V1DQ9Y5K8 247 aa35.94■■■■□ 3.34
KHSRP-213ENST00000619396 PRKCSHP14314 528 aaPredicted RBP35.93■■■■□ 3.34
KHSRP-213ENST00000619396 TERF1P54274 439 aa35.93■■■■□ 3.34
KHSRP-213ENST00000619396 FAM227BQ96M60 508 aa35.93■■■■□ 3.34
KHSRP-213ENST00000619396 MTMR6Q9Y217 621 aa35.93■■■■□ 3.34
KHSRP-213ENST00000619396 RBM8AQ9Y5S9 174 aaKnown RBP35.93■■■■□ 3.34
KHSRP-213ENST00000619396 ABCA3Q99758 1704 aa35.93■■■■□ 3.34
KHSRP-213ENST00000619396 HIP1O00291 1037 aa35.93■■■■□ 3.34
KHSRP-213ENST00000619396 CREB3L3Q68CJ9 461 aa35.93■■■■□ 3.34
KHSRP-213ENST00000619396 UBE3BQ7Z3V4 1068 aa35.93■■■■□ 3.34
KHSRP-213ENST00000619396 FAM184AQ8NB25 1140 aa35.93■■■■□ 3.34
KHSRP-213ENST00000619396 NMIQ13287 307 aaPredicted RBP35.92■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms