RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 PGBD1Q96JS3 809 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 DACT1Q9NYF0 836 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 CFTRP13569 1480 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 SMC1AQ14683 1233 aaKnown RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 CLUL1Q15846 466 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 SPECC1LQ69YQ0 1117 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 LRRC9Q6ZRR7 1453 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 GOLIM4O00461 696 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 MTMR6Q9Y217 621 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ATP6V1AP38606 617 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ARHGAP25P42331 645 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ZNF445P59923 1031 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 HDGFL2Q7Z4V5 671 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 PROSER2Q86WR7 435 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 SATB2Q9UPW6 733 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 hCG_1642624A0A1W2PR95 340 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 WDR66Q8TBY9 1149 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 A0A0U1RQJ8 604 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 UBE2Q2LH0YL09 131 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 SEC31AO94979 1220 aaKnown RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 ALDH3A1P30838 453 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 HAND2P61296 217 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ME3Q16798 604 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 TMCO5AQ8N6Q1 288 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ATRIPQ8WXE1 791 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ABCF2Q9UG63 623 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 MARCKSP29966 332 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 FKBP5Q13451 457 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 KRT222Q8N1A0 295 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 NBPF3Q9H094 633 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 KIF5CO60282 957 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ZNF75DP51815 510 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 NMIQ13287 307 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 BCL2L12Q9HB09 334 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 SCAND2PQ9GZW5 306 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 BCAP29Q9UHQ4 241 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 FGD6Q6ZV73 1430 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ANKRD30AQ9BXX3 1397 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 KLHL40Q2TBA0 621 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 CCAR1Q8IX12 1150 aaKnown RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 MYCBPQ99417 103 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 PYM1Q9BRP8 204 aaKnown RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 IFIT2P09913 472 aaKnown RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 C6orf163Q5TEZ5 329 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 AACSQ86V21 672 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 TMEM51Q9NW97 253 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 PI4KAP2A4QPH2 592 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 PI4KAP1Q8N8J0 262 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 SMARCC1Q92922 1105 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 PHF23Q9BUL5 403 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 HELBQ8NG08 1087 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 VCXQ9H320 206 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 BRD1O95696 1058 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 MX1P20591 662 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 MAP2K2P36507 400 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 G3BP1Q13283 466 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-220ENST00000618972 ZNF594Q96JF6 807 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 TRIM34Q9BYJ4 488 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 UBA5Q9GZZ9 404 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 UACAQ9BZF9 1416 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 BANK1Q8NDB2 785 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 CCDC40Q4G0X9 1142 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 LRRC59Q96AG4 307 aaKnown RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 GDAP1L1Q96MZ0 367 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ZNF330Q9Y3S2 320 aaPredicted RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 LRSAM1Q6UWE0 723 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 THEGQ9P2T0 379 aa3.55□□□□□ -1.84
NEB-220ENST00000618972 ZKSCAN8Q15776 578 aaPredicted RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 ATAD2BQ9ULI0 1458 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 SLFN14P0C7P3 912 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 GRIPAP1Q4V328 841 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 CABLES1Q8TDN4 633 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 WWC2Q6AWC2 1192 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 CEP128Q6ZU80 1094 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 HNRNPH2P55795 449 aaKnown RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 CLIC6Q96NY7 704 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 PUS3Q9BZE2 481 aaKnown RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 KINO60870 393 aaKnown RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 MMP14P50281 582 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 CWF19L2Q2TBE0 894 aaKnown RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 AIFM3Q96NN9 605 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 PLIN2Q99541 437 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 EAF2Q96CJ1 260 aaPredicted RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 IRX4P78413 519 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 TTC19Q6DKK2 380 aaPredicted RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 ARMC2Q8NEN0 867 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 BMP2KLQ5H9B9 411 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 ANO10Q9NW15 660 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 A0A0G2JS52 829 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 GCOM1H8Y6P7 765 aaPredicted RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 MYZAPP0CAP1 466 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 ARID4AP29374 1257 aaPredicted RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 KCTD17Q8N5Z5 321 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 ZC3H6P61129 1189 aaKnown RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 DENND2AQ9ULE3 1009 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 ZKSCAN5Q9Y2L8 839 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 MYL6BP14649 208 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 DPF2Q92785 391 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 CCDC102AQ96A19 550 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 IFT74Q96LB3 600 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms