RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 RPRD2Q5VT52 1461 aaKnown RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 KRT18P05783 430 aaKnown RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 ZSCAN22P10073 491 aaPredicted RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 IRX3P78415 501 aaPredicted RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 PPP1R42Q7Z4L9 355 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 CABLES1Q8TDN4 633 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 MAP3K12Q12852 859 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 CCDC181Q5TID7 509 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 CCDC186Q7Z3E2 898 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 CCDC43Q96MW1 224 aaKnown RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 EXOC6BQ9Y2D4 811 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 EMILIN1Q9Y6C2 1016 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.52□□□□□ -1.85
LPP-221ENST00000618621 PLEKHH2Q8IVE3 1493 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 EXOC8Q8IYI6 725 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 TSC1Q92574 1164 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 LARP6Q9BRS8 491 aaKnown RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 ESYT1Q9BSJ8 1104 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 LRRC27Q9C0I9 530 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 SIL1Q9H173 461 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 DBF4Q9UBU7 674 aaPredicted RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 ATP10BO94823 1461 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 ERICH4A6NGS2 130 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 IFIT3O14879 490 aaKnown RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 UBASH3AP57075 661 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 METTL24Q5JXM2 366 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 MCM10Q7L590 875 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 RAI14Q9P0K7 980 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 POLR3AO14802 1390 aaPredicted RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 IFIT1P09914 478 aaKnown RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 MYL6BP14649 208 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 MAP2K1Q02750 393 aaPredicted RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 TSHZ3Q63HK5 1081 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 TUBB1Q9H4B7 451 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 BMP15O95972 392 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 ZFYP08048 801 aaPredicted RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 POTEJP0CG39 1038 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 CNNM3Q8NE01 707 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 IGHMBP2P38935 993 aaKnown RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 FAM193AP78312 1265 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 TTF1Q15361 905 aaPredicted RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 FERMT3Q86UX7 667 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 PAFAH1B1P43034 410 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 NPC1L1Q9UHC9 1359 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 FAM200AQ8TCP9 573 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 SEPT10Q9P0V9 454 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 PHF8Q9UPP1 1060 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 ATAD2Q6PL18 1390 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 SYT1P21579 422 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 FSIP1Q8NA03 581 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 NAA15Q9BXJ9 866 aaKnown RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 VPS36Q86VN1 386 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 C16orf45Q96MC5 204 aaPredicted RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 TRERF1Q96PN7 1200 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 HSP90AB3PQ58FF7 597 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 AIDAQ96BJ3 306 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 SPTLC3Q9NUV7 552 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 GOLIM4O00461 696 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CHRM1P11229 460 aaPredicted RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 HDXQ7Z353 690 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.51□□□□□ -1.85
LPP-221ENST00000618621 TRIM35Q9UPQ4 493 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 GNG11P61952 73 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CCDC91Q7Z6B0 441 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 KCNG4Q8TDN1 519 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CNPY2Q9Y2B0 182 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 SNRPA1P09661 255 aaKnown RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 NLRP5P59047 1200 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 MAPK8IP2Q13387 824 aaPredicted RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 ZNF444Q8N0Y2 327 aaPredicted RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 SEC63Q9UGP8 760 aaKnown RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 LLPHQ9BRT6 129 aaKnown RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 WASLO00401 505 aaPredicted RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 BABAM1Q9NWV8 329 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 RTEL1-TNFRSF6BF6WH68 1400 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 EZRP15311 586 aaKnown RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 KIF5BP33176 963 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 EIF5P55010 431 aaKnown RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 LMBR1Q8WVP7 490 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 INCENPQ9NQS7 918 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 F6X3S4 739 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 OPA1O60313 960 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CHMLP26374 656 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 DHX32Q7L7V1 743 aaKnown RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 LUZP1Q86V48 1076 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 GPT2Q8TD30 523 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 RNF187Q5TA31 235 aaPredicted RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 PAF1Q8N7H5 531 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 TIAM1Q13009 1591 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 HSF2BPO75031 334 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 SLC5A1P13866 664 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CETN2P41208 172 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 SYCP1Q15431 976 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CAVIN4Q5BKX8 364 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CTAGE1Q96RT6 745 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 PRDM11Q9NQV5 511 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 ORC3Q9UBD5 711 aaPredicted RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 CCDC171Q6TFL3 1326 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CC2D2BQ6DHV5 1058 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 TMC6Q7Z403 805 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms