RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SKIP12755 728 aa7.08□□□□□ -1.28
TARDBP-220ENST00000618606 NFATC2IPQ8NCF5 419 aa7.08□□□□□ -1.28
TARDBP-220ENST00000618606 NUDT8Q8WV74 236 aa7.08□□□□□ -1.28
TARDBP-220ENST00000618606 NCOA4Q13772 614 aa7.07□□□□□ -1.28
TARDBP-220ENST00000618606 PSAPL1Q6NUJ1 521 aa7.07□□□□□ -1.28
TARDBP-220ENST00000618606 DMRTC2Q8IXT2 367 aaPredicted RBP7.07□□□□□ -1.28
TARDBP-220ENST00000618606 ZNF280CQ8ND82 737 aa7.07□□□□□ -1.28
TARDBP-220ENST00000618606 SUSD3Q96L08 255 aa7.07□□□□□ -1.28
TARDBP-220ENST00000618606 PHACTR1Q9C0D0 580 aa7.07□□□□□ -1.28
TARDBP-220ENST00000618606 TBC1D8BQ0IIM8 1120 aa7.06□□□□□ -1.28
TARDBP-220ENST00000618606 DTWD1Q8N5C7 304 aa7.06□□□□□ -1.28
TARDBP-220ENST00000618606 WFDC12Q8WWY7 111 aa7.06□□□□□ -1.28
TARDBP-220ENST00000618606 CHMP3Q9Y3E7 222 aa7.06□□□□□ -1.28
TARDBP-220ENST00000618606 HCN4Q9Y3Q4 1203 aa7.06□□□□□ -1.28
TARDBP-220ENST00000618606 COL17A1Q9UMD9 1497 aaPredicted RBP7.05□□□□□ -1.28
TARDBP-220ENST00000618606 RGS9O75916 674 aaPredicted RBP7.05□□□□□ -1.28
TARDBP-220ENST00000618606 IGFLR1Q9H665 355 aa7.05□□□□□ -1.28
TARDBP-220ENST00000618606 DNAJB12Q9NXW2 375 aaKnown RBP7.05□□□□□ -1.28
TARDBP-220ENST00000618606 PRKCSHP14314 528 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-220ENST00000618606 SLC51AQ86UW1 340 aa7.04□□□□□ -1.28
TARDBP-220ENST00000618606 FBXO11Q86XK2 927 aa7.04□□□□□ -1.28
TARDBP-220ENST00000618606 TSPAN10Q9H1Z9 355 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-220ENST00000618606 NAGPAQ9UK23 515 aa7.04□□□□□ -1.28
TARDBP-220ENST00000618606 NOS3P29474 1203 aa7.03□□□□□ -1.28
TARDBP-220ENST00000618606 IREB2P48200 963 aaKnown RBP7.03□□□□□ -1.28
TARDBP-220ENST00000618606 MSL1Q68DK7 614 aa7.03□□□□□ -1.28
TARDBP-220ENST00000618606 BTLAQ7Z6A9 289 aa7.03□□□□□ -1.28
TARDBP-220ENST00000618606 GSX2Q9BZM3 304 aa7.03□□□□□ -1.28
TARDBP-220ENST00000618606 M0R2N6 131 aa7.02□□□□□ -1.29
TARDBP-220ENST00000618606 ZBTB7BO15156 539 aaPredicted RBP7.02□□□□□ -1.29
TARDBP-220ENST00000618606 PAX4O43316 350 aa7.02□□□□□ -1.29
TARDBP-220ENST00000618606 HIF1AQ16665 826 aa7.02□□□□□ -1.29
TARDBP-220ENST00000618606 PRR23CQ6ZRP0 262 aa7.02□□□□□ -1.29
TARDBP-220ENST00000618606 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
TARDBP-220ENST00000618606 POM121Q96HA1 1249 aa7.02□□□□□ -1.29
TARDBP-220ENST00000618606 USP17L5A8MUK1 530 aa7.01□□□□□ -1.29
TARDBP-220ENST00000618606 PCSK7Q16549 785 aa7.01□□□□□ -1.29
TARDBP-220ENST00000618606 CCDC102BQ68D86 513 aa7.01□□□□□ -1.29
TARDBP-220ENST00000618606 IGF2-ASQ6U949 168 aa7.01□□□□□ -1.29
TARDBP-220ENST00000618606 TPCN2Q8NHX9 752 aa7.01□□□□□ -1.29
TARDBP-220ENST00000618606 MEGF10Q96KG7 1140 aa7.01□□□□□ -1.29
TARDBP-220ENST00000618606 FMNL2Q96PY5 1086 aa7.01□□□□□ -1.29
TARDBP-220ENST00000618606 PCMTD2Q9NV79 361 aa7.01□□□□□ -1.29
TARDBP-220ENST00000618606 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.01□□□□□ -1.29
TARDBP-220ENST00000618606 TXKP42681 527 aa7□□□□□ -1.29
TARDBP-220ENST00000618606 ATP1A2P50993 1020 aa7□□□□□ -1.29
TARDBP-220ENST00000618606 GRIK5Q16478 980 aa7□□□□□ -1.29
TARDBP-220ENST00000618606 WWC1Q8IX03 1113 aa7□□□□□ -1.29
TARDBP-220ENST00000618606 ALDH16A1Q8IZ83 802 aa7□□□□□ -1.29
TARDBP-220ENST00000618606 DEPDC4Q8N2C3 294 aa7□□□□□ -1.29
TARDBP-220ENST00000618606 FRRS1LQ9P0K9 344 aa7□□□□□ -1.29
TARDBP-220ENST00000618606 KIAA1024Q9UPX6 916 aa7□□□□□ -1.29
TARDBP-220ENST00000618606 CCINQ13939 588 aa6.99□□□□□ -1.29
TARDBP-220ENST00000618606 IER5Q5VY09 327 aa6.99□□□□□ -1.29
TARDBP-220ENST00000618606 FAM35AQ86V20 835 aa6.99□□□□□ -1.29
TARDBP-220ENST00000618606 STAG2Q8N3U4 1231 aa6.99□□□□□ -1.29
TARDBP-220ENST00000618606 PNMA5Q96PV4 448 aa6.99□□□□□ -1.29
TARDBP-220ENST00000618606 LPIN3Q9BQK8 851 aa6.99□□□□□ -1.29
TARDBP-220ENST00000618606 C21orf2O43822 256 aa6.98□□□□□ -1.29
TARDBP-220ENST00000618606 RAD21O60216 631 aa6.98□□□□□ -1.29
TARDBP-220ENST00000618606 PPP1R12BO60237 982 aaPredicted RBP6.98□□□□□ -1.29
TARDBP-220ENST00000618606 NFKB1P19838 968 aa6.98□□□□□ -1.29
TARDBP-220ENST00000618606 CLDN10P78369 228 aa6.98□□□□□ -1.29
TARDBP-220ENST00000618606 PLEKHM2Q8IWE5 1019 aa6.98□□□□□ -1.29
TARDBP-220ENST00000618606 ADAMTS19Q8TE59 1207 aa6.98□□□□□ -1.29
TARDBP-220ENST00000618606 TTC9Q92623 222 aa6.98□□□□□ -1.29
TARDBP-220ENST00000618606 MAP3K6O95382 1288 aa6.97□□□□□ -1.29
TARDBP-220ENST00000618606 FLIIQ13045 1269 aa6.97□□□□□ -1.29
TARDBP-220ENST00000618606 WFDC8Q8IUA0 241 aa6.97□□□□□ -1.29
TARDBP-220ENST00000618606 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
TARDBP-220ENST00000618606 LARGE2Q8N3Y3 721 aa6.97□□□□□ -1.29
TARDBP-220ENST00000618606 POM121CA8CG34 1229 aa6.96□□□□□ -1.3
TARDBP-220ENST00000618606 CPB1P15086 417 aa6.96□□□□□ -1.3
TARDBP-220ENST00000618606 YBX3P16989 372 aaKnown RBP eCLIP6.96□□□□□ -1.3
TARDBP-220ENST00000618606 FSTP19883 344 aa6.96□□□□□ -1.3
TARDBP-220ENST00000618606 CD97P48960 835 aa6.96□□□□□ -1.3
TARDBP-220ENST00000618606 C2orf49Q9BVC5 232 aaPredicted RBP6.96□□□□□ -1.3
TARDBP-220ENST00000618606 ARID1BQ8NFD5 2236 aaPredicted RBP6.96□□□□□ -1.3
TARDBP-220ENST00000618606 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
TARDBP-220ENST00000618606 PALM3A6NDB9 673 aaPredicted RBP6.95□□□□□ -1.3
TARDBP-220ENST00000618606 TGFBR3LH3BV60 316 aa6.95□□□□□ -1.3
TARDBP-220ENST00000618606 DEAF1O75398 565 aaPredicted RBP6.95□□□□□ -1.3
TARDBP-220ENST00000618606 PERM1Q5SV97 790 aa6.95□□□□□ -1.3
TARDBP-220ENST00000618606 HDGFL1Q5TGJ6 251 aa6.95□□□□□ -1.3
TARDBP-220ENST00000618606 TSEN2Q8NCE0 465 aaKnown RBP6.95□□□□□ -1.3
TARDBP-220ENST00000618606 GAS2L2Q8NHY3 880 aa6.95□□□□□ -1.3
TARDBP-220ENST00000618606 TRPM4Q8TD43 1214 aa6.95□□□□□ -1.3
TARDBP-220ENST00000618606 DMGDHQ9UI17 866 aaKnown RBP6.95□□□□□ -1.3
TARDBP-220ENST00000618606 DLL1O00548 723 aa6.94□□□□□ -1.3
TARDBP-220ENST00000618606 COBLO75128 1261 aa6.94□□□□□ -1.3
TARDBP-220ENST00000618606 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
TARDBP-220ENST00000618606 SSTR4P31391 388 aa6.94□□□□□ -1.3
TARDBP-220ENST00000618606 ELMSAN1Q6PJG2 1045 aa6.94□□□□□ -1.3
TARDBP-220ENST00000618606 SIX5Q8N196 739 aa6.94□□□□□ -1.3
TARDBP-220ENST00000618606 TMEM130Q8N3G9 435 aa6.94□□□□□ -1.3
TARDBP-220ENST00000618606 OGFOD1Q8N543 542 aa6.94□□□□□ -1.3
TARDBP-220ENST00000618606 UCN2Q96RP3 112 aa6.94□□□□□ -1.3
TARDBP-220ENST00000618606 AKTIPQ9H8T0 292 aa6.94□□□□□ -1.3
TARDBP-220ENST00000618606 USP17L3A6NCW0 530 aa6.93□□□□□ -1.3
TARDBP-220ENST00000618606 USP17L4A6NCW7 530 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms