RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ABT1Q9ULW3 272 aaKnown RBP6.28□□□□□ -1.4
SNCA-213ENST00000618500 ECM29Q5VYK3 1845 aa6.28□□□□□ -1.4
SNCA-213ENST00000618500 SYNE4Q8N205 404 aa6.27□□□□□ -1.41
SNCA-213ENST00000618500 CRAMP1Q96RY5 1269 aa6.27□□□□□ -1.41
SNCA-213ENST00000618500 TAF1P21675 1872 aa6.27□□□□□ -1.41
SNCA-213ENST00000618500 TNRC18O15417 2968 aaPredicted RBP6.27□□□□□ -1.41
SNCA-213ENST00000618500 SUPT20HQ8NEM7 779 aa6.27□□□□□ -1.41
SNCA-213ENST00000618500 NYXQ9GZU5 481 aa6.27□□□□□ -1.41
SNCA-213ENST00000618500 FAM155AB1AL88 458 aaPredicted RBP6.26□□□□□ -1.41
SNCA-213ENST00000618500 DGKZQ13574 1117 aa6.26□□□□□ -1.41
SNCA-213ENST00000618500 ZNF496Q96IT1 587 aaPredicted RBP6.26□□□□□ -1.41
SNCA-213ENST00000618500 FMNL2Q96PY5 1086 aa6.26□□□□□ -1.41
SNCA-213ENST00000618500 GPRC5DQ9NZD1 345 aa6.26□□□□□ -1.41
SNCA-213ENST00000618500 COL4A1P02462 1669 aa6.26□□□□□ -1.41
SNCA-213ENST00000618500 ERVV-1B6SEH8 477 aa6.26□□□□□ -1.41
SNCA-213ENST00000618500 EAPPQ56P03 285 aaPredicted RBP6.26□□□□□ -1.41
SNCA-213ENST00000618500 AEBP1Q8IUX7 1158 aa6.26□□□□□ -1.41
SNCA-213ENST00000618500 DLG5Q8TDM6 1919 aa6.26□□□□□ -1.41
SNCA-213ENST00000618500 COL1A1P02452 1464 aaPredicted RBP6.26□□□□□ -1.41
SNCA-213ENST00000618500 MYCNP04198 464 aaPredicted RBP6.25□□□□□ -1.41
SNCA-213ENST00000618500 MAP1SQ66K74 1059 aaPredicted RBP6.25□□□□□ -1.41
SNCA-213ENST00000618500 SULT6B1Q6IMI4 303 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 CYP4F22Q6NT55 531 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 ZNF790Q6PG37 636 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 TTC5Q8N0Z6 440 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 GAS2L2Q8NHY3 880 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 CCDC102AQ96A19 550 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 CTU1Q7Z7A3 348 aaKnown RBP6.25□□□□□ -1.41
SNCA-213ENST00000618500 NBPF15Q8N660 670 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 JDP2Q8WYK2 163 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 CLEC11AQ9Y240 323 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 GOLGB1Q14789 3259 aaKnown RBP6.25□□□□□ -1.41
SNCA-213ENST00000618500 CLSPNQ9HAW4 1339 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 CASP8AP2Q9UKL3 1982 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 TPTE2Q6XPS3 522 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 TMC4Q7Z404 712 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 LGR6Q9HBX8 967 aa6.25□□□□□ -1.41
SNCA-213ENST00000618500 ZNF277Q9NRM2 450 aaPredicted RBP6.25□□□□□ -1.41
SNCA-213ENST00000618500 PPM1GO15355 546 aaPredicted RBP6.24□□□□□ -1.41
SNCA-213ENST00000618500 HTATSF1O43719 755 aaKnown RBP6.24□□□□□ -1.41
SNCA-213ENST00000618500 FKBP1BP68106 108 aa6.24□□□□□ -1.41
SNCA-213ENST00000618500 DZIP3Q86Y13 1208 aaKnown RBP6.24□□□□□ -1.41
SNCA-213ENST00000618500 ERBB4Q15303 1308 aa6.24□□□□□ -1.41
SNCA-213ENST00000618500 SLC10A3P09131 477 aa6.24□□□□□ -1.41
SNCA-213ENST00000618500 NBPF5PQ86XG9 351 aaPredicted RBP6.24□□□□□ -1.41
SNCA-213ENST00000618500 SSC5DA1L4H1 1573 aa6.24□□□□□ -1.41
SNCA-213ENST00000618500 AOC2O75106 756 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 MTHFSDQ2M296 383 aaKnown RBP6.23□□□□□ -1.41
SNCA-213ENST00000618500 CDC37L1Q7L3B6 337 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 ABCC12Q96J65 1359 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 RPS12P25398 132 aaKnown RBP6.23□□□□□ -1.41
SNCA-213ENST00000618500 CANXP27824 592 aaKnown RBP6.23□□□□□ -1.41
SNCA-213ENST00000618500 MMP14P50281 582 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 NIM1KQ8IY84 436 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 DPF2Q92785 391 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 PITPNM2Q9BZ72 1349 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 GNAT3A8MTJ3 354 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 ABCB7O75027 752 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 FMR1Q06787 632 aaKnown RBP eCLIP6.23□□□□□ -1.41
SNCA-213ENST00000618500 TNIP1Q15025 636 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 SLC10A5Q5PT55 438 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 RBM17Q96I25 401 aaKnown RBP6.23□□□□□ -1.41
SNCA-213ENST00000618500 ZNRF3Q9ULT6 936 aa6.23□□□□□ -1.41
SNCA-213ENST00000618500 SLC39A6Q13433 755 aa6.22□□□□□ -1.41
SNCA-213ENST00000618500 RGMBQ6NW40 437 aa6.22□□□□□ -1.41
SNCA-213ENST00000618500 BICDL1Q6ZP65 573 aa6.22□□□□□ -1.41
SNCA-213ENST00000618500 ARAP2Q8WZ64 1704 aa6.22□□□□□ -1.41
SNCA-213ENST00000618500 PPEF1O14829 653 aaPredicted RBP6.22□□□□□ -1.41
SNCA-213ENST00000618500 CELF2O95319 508 aaKnown RBP6.22□□□□□ -1.41
SNCA-213ENST00000618500 EPS15P42566 896 aa6.22□□□□□ -1.41
SNCA-213ENST00000618500 AMER1Q5JTC6 1135 aaPredicted RBP6.22□□□□□ -1.41
SNCA-213ENST00000618500 MORC1Q86VD1 984 aa6.22□□□□□ -1.41
SNCA-213ENST00000618500 ATP6V0A2Q9Y487 856 aa6.22□□□□□ -1.41
SNCA-213ENST00000618500 CIAPIN1Q6FI81 312 aa6.21□□□□□ -1.41
SNCA-213ENST00000618500 RNF186Q9NXI6 227 aa6.21□□□□□ -1.41
SNCA-213ENST00000618500 HPS5Q9UPZ3 1129 aa6.21□□□□□ -1.41
SNCA-213ENST00000618500 SNRPA1P09661 255 aaKnown RBP6.21□□□□□ -1.42
SNCA-213ENST00000618500 KIAA2012Q0VF49 1180 aa6.21□□□□□ -1.42
SNCA-213ENST00000618500 IL17REQ8NFR9 667 aa6.21□□□□□ -1.42
SNCA-213ENST00000618500 MAP3K15Q6ZN16 1313 aa6.21□□□□□ -1.42
SNCA-213ENST00000618500 TRAF5O00463 557 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 INTS3Q68E01 1043 aaKnown RBP6.2□□□□□ -1.42
SNCA-213ENST00000618500 TBC1D2BQ9UPU7 963 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 A0A1B0GUL6 1792 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 UNCXA6NJT0 531 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 TEFQ10587 303 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 PARP10Q53GL7 1025 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 HABP4Q5JVS0 413 aaKnown RBP6.2□□□□□ -1.42
SNCA-213ENST00000618500 FBXO46Q6PJ61 603 aaPredicted RBP6.2□□□□□ -1.42
SNCA-213ENST00000618500 SP8Q8IXZ3 490 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 NTSR2O95665 410 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 ATXN8OSP0DMR3 200 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 CAPN2P17655 700 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 ZNF34Q8IZ26 560 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 LARGE2Q8N3Y3 721 aa6.2□□□□□ -1.42
SNCA-213ENST00000618500 DIAPH1O60610 1272 aaKnown RBP6.19□□□□□ -1.42
SNCA-213ENST00000618500 BBOX1O75936 387 aa6.19□□□□□ -1.42
SNCA-213ENST00000618500 TM4SF4P48230 202 aa6.19□□□□□ -1.42
SNCA-213ENST00000618500 GMPSP49915 693 aaPredicted RBP6.19□□□□□ -1.42
SNCA-213ENST00000618500 RASAL3Q86YV0 1011 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms