RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PKD1L3Q7Z443 1732 aa15.01□□□□□ -0.01
CIITA-212ENST00000618207 ADAMTS2O95450 1211 aa15.01□□□□□ -0.01
CIITA-212ENST00000618207 HSPA4P34932 840 aa15.01□□□□□ -0.01
CIITA-212ENST00000618207 ZNF594Q96JF6 807 aaPredicted RBP15.01□□□□□ -0.01
CIITA-212ENST00000618207 LSG1Q9H089 658 aaKnown RBP15.01□□□□□ -0.01
CIITA-212ENST00000618207 BAG4O95429 457 aaKnown RBP15.01□□□□□ -0.01
CIITA-212ENST00000618207 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
CIITA-212ENST00000618207 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
CIITA-212ENST00000618207 DNAJC10Q8IXB1 793 aa15.01□□□□□ -0.01
CIITA-212ENST00000618207 NEUROD6Q96NK8 337 aa15.01□□□□□ -0.01
CIITA-212ENST00000618207 DNAJC2Q99543 621 aaKnown RBP15.01□□□□□ -0.01
CIITA-212ENST00000618207 RAD50Q92878 1312 aa15□□□□□ -0.01
CIITA-212ENST00000618207 SNX14Q9Y5W7 946 aa15□□□□□ -0.01
CIITA-212ENST00000618207 PIGBQ92521 554 aa15□□□□□ -0.01
CIITA-212ENST00000618207 NMIQ13287 307 aaPredicted RBP14.99□□□□□ -0.01
CIITA-212ENST00000618207 EVI5LQ96CN4 794 aa14.99□□□□□ -0.01
CIITA-212ENST00000618207 MRC1P22897 1456 aa14.99□□□□□ -0.01
CIITA-212ENST00000618207 CASTP20810 708 aaKnown RBP14.99□□□□□ -0.01
CIITA-212ENST00000618207 DBNDD2Q9BQY9 259 aa14.99□□□□□ -0.01
CIITA-212ENST00000618207 CWC25Q9NXE8 425 aaPredicted RBP14.99□□□□□ -0.01
CIITA-212ENST00000618207 DBNLQ9UJU6 430 aaKnown RBP14.99□□□□□ -0.01
CIITA-212ENST00000618207 RFX5P48382 616 aaPredicted RBP14.98□□□□□ -0.01
CIITA-212ENST00000618207 NUCB2P80303 420 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 ADCK5Q3MIX3 580 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 RUFY2Q8WXA3 655 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 GOLGA6L22H0YM25 854 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 ANAPC15P60006 121 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 GLIPR1L2Q4G1C9 344 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 ZDHHC9Q9Y397 364 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 DDX49Q9Y6V7 483 aaKnown RBP14.98□□□□□ -0.01
CIITA-212ENST00000618207 USP42Q9H9J4 1324 aaKnown RBP14.98□□□□□ -0.01
CIITA-212ENST00000618207 A0A0D9SFI3 127 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 GOLGA6L3A6NEY3 463 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 GPTP24298 496 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 TIMM10P62072 90 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 PDE4CQ08493 712 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 TNNI3KQ59H18 835 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 TCEANC2Q96MN5 208 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 FPGT-TNNI3KV9GXZ4 949 aa14.98□□□□□ -0.01
CIITA-212ENST00000618207 ARFGEF2Q9Y6D5 1785 aa14.97□□□□□ -0.01
CIITA-212ENST00000618207 SYNE4Q8N205 404 aa14.97□□□□□ -0.01
CIITA-212ENST00000618207 COPRSQ9NQ92 184 aa14.97□□□□□ -0.01
CIITA-212ENST00000618207 PARP4Q9UKK3 1724 aaKnown RBP14.97□□□□□ -0.01
CIITA-212ENST00000618207 NUTM2BA6NNL0 878 aaPredicted RBP14.97□□□□□ -0.01
CIITA-212ENST00000618207 NUTM2EB1AL46 878 aaPredicted RBP14.97□□□□□ -0.01
CIITA-212ENST00000618207 COL9A3Q14050 684 aaPredicted RBP14.97□□□□□ -0.01
CIITA-212ENST00000618207 NKX1-1Q15270 411 aaPredicted RBP14.97□□□□□ -0.01
CIITA-212ENST00000618207 NUTM2AQ8IVF1 878 aaPredicted RBP14.97□□□□□ -0.01
CIITA-212ENST00000618207 FAM89AQ96GI7 184 aa14.97□□□□□ -0.01
CIITA-212ENST00000618207 JAKMIP1Q96N16 626 aaKnown RBP14.97□□□□□ -0.01
CIITA-212ENST00000618207 PANK2Q9BZ23 570 aa14.97□□□□□ -0.01
CIITA-212ENST00000618207 CASP7P55210 303 aa14.96□□□□□ -0.01
CIITA-212ENST00000618207 SLFNL1Q499Z3 407 aa14.96□□□□□ -0.01
CIITA-212ENST00000618207 LRRC24Q50LG9 513 aa14.96□□□□□ -0.01
CIITA-212ENST00000618207 DDX46Q7L014 1031 aaKnown RBP14.96□□□□□ -0.01
CIITA-212ENST00000618207 CWC22Q9HCG8 908 aaKnown RBP14.96□□□□□ -0.01
CIITA-212ENST00000618207 AK2P54819 239 aa14.96□□□□□ -0.02
CIITA-212ENST00000618207 FOXO4P98177 505 aa14.96□□□□□ -0.02
CIITA-212ENST00000618207 PRPF40AO75400 957 aaKnown RBP14.95□□□□□ -0.02
CIITA-212ENST00000618207 PUS3Q9BZE2 481 aaKnown RBP14.95□□□□□ -0.02
CIITA-212ENST00000618207 ZMYND15Q9H091 742 aa14.95□□□□□ -0.02
CIITA-212ENST00000618207 H7C1W4 665 aa14.95□□□□□ -0.02
CIITA-212ENST00000618207 RABL6Q3YEC7 729 aaPredicted RBP14.95□□□□□ -0.02
CIITA-212ENST00000618207 CCDC129Q6ZRS4 1044 aa14.95□□□□□ -0.02
CIITA-212ENST00000618207 ZNF589Q86UQ0 364 aaPredicted RBP14.95□□□□□ -0.02
CIITA-212ENST00000618207 SEC62Q99442 399 aaKnown RBP14.95□□□□□ -0.02
CIITA-212ENST00000618207 ATG3Q9NT62 314 aa14.95□□□□□ -0.02
CIITA-212ENST00000618207 RBM8AQ9Y5S9 174 aaKnown RBP14.95□□□□□ -0.02
CIITA-212ENST00000618207 MCM2P49736 904 aa14.94□□□□□ -0.02
CIITA-212ENST00000618207 ABCC6O95255 1503 aa14.94□□□□□ -0.02
CIITA-212ENST00000618207 ACSBG1Q96GR2 724 aa14.94□□□□□ -0.02
CIITA-212ENST00000618207 TAF6LQ9Y6J9 622 aa14.94□□□□□ -0.02
CIITA-212ENST00000618207 CCDC171Q6TFL3 1326 aa14.94□□□□□ -0.02
CIITA-212ENST00000618207 ABCA3Q99758 1704 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 PDIA4P13667 645 aaKnown RBP14.93□□□□□ -0.02
CIITA-212ENST00000618207 PIP4K2BP78356 416 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 GLI3P10071 1580 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 KCPQ6ZWJ8 1503 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 FAM177BA6PVY3 158 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 EXOC5O00471 708 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 CYP2E1P05181 493 aaPredicted RBP14.93□□□□□ -0.02
CIITA-212ENST00000618207 XRCC6P12956 609 aaKnown RBP eCLIP14.93□□□□□ -0.02
CIITA-212ENST00000618207 LARGE1O95461 756 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 PRIM1P49642 420 aaKnown RBP14.93□□□□□ -0.02
CIITA-212ENST00000618207 HLFQ16534 295 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 RUFY3Q7L099 469 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 GDPD2Q9HCC8 539 aa14.93□□□□□ -0.02
CIITA-212ENST00000618207 CAVIN1Q6NZI2 390 aaKnown RBP14.92□□□□□ -0.02
CIITA-212ENST00000618207 GAS2L3Q86XJ1 694 aa14.92□□□□□ -0.02
CIITA-212ENST00000618207 CCDC191Q8NCU4 936 aa14.92□□□□□ -0.02
CIITA-212ENST00000618207 TBC1D2BQ9UPU7 963 aa14.92□□□□□ -0.02
CIITA-212ENST00000618207 KIF6Q6ZMV9 814 aa14.92□□□□□ -0.02
CIITA-212ENST00000618207 ERBB4Q15303 1308 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 GOLIM4O00461 696 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 ZKSCAN1P17029 563 aaPredicted RBP14.91□□□□□ -0.02
CIITA-212ENST00000618207 CUL4AQ13619 759 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 L1TD1Q5T7N2 865 aaKnown RBP14.91□□□□□ -0.02
CIITA-212ENST00000618207 CREB3L3Q68CJ9 461 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 ATG9AQ7Z3C6 839 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 CCDC83Q8IWF9 413 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms