RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 BICDL1Q6ZP65 573 aa20.33■□□□□ 0.85
SNAP47-213ENST00000617596 SYNE4Q8N205 404 aa20.33■□□□□ 0.85
SNAP47-213ENST00000617596 ANKRD44Q8N8A2 993 aa20.33■□□□□ 0.85
SNAP47-213ENST00000617596 NARFQ9UHQ1 456 aa20.33■□□□□ 0.85
SNAP47-213ENST00000617596 AFDNP55196 1824 aaKnown RBP20.33■□□□□ 0.85
SNAP47-213ENST00000617596 ZPR1O75312 459 aa20.33■□□□□ 0.84
SNAP47-213ENST00000617596 HDAC1Q13547 482 aaPredicted RBP20.33■□□□□ 0.84
SNAP47-213ENST00000617596 ZNF34Q8IZ26 560 aa20.33■□□□□ 0.84
SNAP47-213ENST00000617596 FAM89AQ96GI7 184 aa20.33■□□□□ 0.84
SNAP47-213ENST00000617596 TFCP2L1Q9NZI6 479 aa20.33■□□□□ 0.84
SNAP47-213ENST00000617596 CASP7P55210 303 aa20.32■□□□□ 0.84
SNAP47-213ENST00000617596 TRIM28Q13263 835 aaKnown RBP20.32■□□□□ 0.84
SNAP47-213ENST00000617596 EPHA10Q5JZY3 1008 aa20.32■□□□□ 0.84
SNAP47-213ENST00000617596 CENPQQ7L2Z9 268 aaPredicted RBP20.32■□□□□ 0.84
SNAP47-213ENST00000617596 AKT1S1Q96B36 256 aa20.32■□□□□ 0.84
SNAP47-213ENST00000617596 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNAP47-213ENST00000617596 H7C1W4 665 aa20.31■□□□□ 0.84
SNAP47-213ENST00000617596 RPAP2Q8IXW5 612 aaPredicted RBP20.31■□□□□ 0.84
SNAP47-213ENST00000617596 BICC1Q9H694 974 aaKnown RBP20.31■□□□□ 0.84
SNAP47-213ENST00000617596 NUP98P52948 1817 aa20.31■□□□□ 0.84
SNAP47-213ENST00000617596 BAG6P46379 1132 aa20.31■□□□□ 0.84
SNAP47-213ENST00000617596 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
SNAP47-213ENST00000617596 SUSD4Q5VX71 490 aa20.3■□□□□ 0.84
SNAP47-213ENST00000617596 PPP1R42Q7Z4L9 355 aa20.3■□□□□ 0.84
SNAP47-213ENST00000617596 ANO8Q9HCE9 1232 aaPredicted RBP20.3■□□□□ 0.84
SNAP47-213ENST00000617596 ZNF652Q9Y2D9 606 aa20.3■□□□□ 0.84
SNAP47-213ENST00000617596 USP42Q9H9J4 1324 aaKnown RBP20.3■□□□□ 0.84
SNAP47-213ENST00000617596 UBR3Q6ZT12 1888 aa20.29■□□□□ 0.84
SNAP47-213ENST00000617596 SSFA2P28290 1259 aa20.29■□□□□ 0.84
SNAP47-213ENST00000617596 ATP8B2P98198 1209 aa20.29■□□□□ 0.84
SNAP47-213ENST00000617596 TRMT112Q9UI30 125 aaKnown RBP20.29■□□□□ 0.84
SNAP47-213ENST00000617596 SOCS7O14512 581 aa20.28■□□□□ 0.84
SNAP47-213ENST00000617596 SRGAP3O43295 1099 aa20.28■□□□□ 0.84
SNAP47-213ENST00000617596 ADRA2BP18089 450 aa20.28■□□□□ 0.84
SNAP47-213ENST00000617596 CLEC4GQ6UXB4 293 aa20.28■□□□□ 0.84
SNAP47-213ENST00000617596 ZBTB38Q8NAP3 1195 aaPredicted RBP20.27■□□□□ 0.84
SNAP47-213ENST00000617596 IBTKQ9P2D0 1353 aaPredicted RBP20.27■□□□□ 0.84
SNAP47-213ENST00000617596 PCCAP05165 728 aaPredicted RBP20.27■□□□□ 0.84
SNAP47-213ENST00000617596 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
SNAP47-213ENST00000617596 BCORQ6W2J9 1755 aa20.27■□□□□ 0.84
SNAP47-213ENST00000617596 COL23A1Q86Y22 540 aaPredicted RBP20.27■□□□□ 0.84
SNAP47-213ENST00000617596 NUTM1Q86Y26 1132 aa20.26■□□□□ 0.83
SNAP47-213ENST00000617596 ANKRD36CQ5JPF3 1778 aa20.26■□□□□ 0.83
SNAP47-213ENST00000617596 APBB1O00213 710 aa20.25■□□□□ 0.83
SNAP47-213ENST00000617596 FOXO4P98177 505 aa20.25■□□□□ 0.83
SNAP47-213ENST00000617596 RGPD3A6NKT7 1758 aaPredicted RBP20.25■□□□□ 0.83
SNAP47-213ENST00000617596 RGPD4Q7Z3J3 1758 aa20.25■□□□□ 0.83
SNAP47-213ENST00000617596 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
SNAP47-213ENST00000617596 GYS1P13807 737 aa20.25■□□□□ 0.83
SNAP47-213ENST00000617596 CCDC85AQ96PX6 553 aaPredicted RBP20.25■□□□□ 0.83
SNAP47-213ENST00000617596 HMMRO75330 724 aa20.24■□□□□ 0.83
SNAP47-213ENST00000617596 SMC5Q8IY18 1101 aa20.24■□□□□ 0.83
SNAP47-213ENST00000617596 UTP14AQ9BVJ6 771 aaKnown RBP20.24■□□□□ 0.83
SNAP47-213ENST00000617596 EXOC6BQ9Y2D4 811 aa20.24■□□□□ 0.83
SNAP47-213ENST00000617596 PNPLA7Q6ZV29 1317 aa20.24■□□□□ 0.83
SNAP47-213ENST00000617596 NTSR2O95665 410 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 PARP10Q53GL7 1025 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 SSH3Q8TE77 659 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 SETDB2Q96T68 719 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 DCTPP1Q9H773 170 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 CHMP3Q9Y3E7 222 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 IRS4O14654 1257 aaPredicted RBP20.23■□□□□ 0.83
SNAP47-213ENST00000617596 HCLS1P14317 486 aaPredicted RBP20.23■□□□□ 0.83
SNAP47-213ENST00000617596 POLA2Q14181 598 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 SLC15A2Q16348 729 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 CCDC24Q8N4L8 307 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 KLHDC4Q8TBB5 520 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 PDZRN3Q9UPQ7 1066 aa20.23■□□□□ 0.83
SNAP47-213ENST00000617596 PA2G4Q9UQ80 394 aaKnown RBP20.23■□□□□ 0.83
SNAP47-213ENST00000617596 HMGB2P26583 209 aaKnown RBP20.22■□□□□ 0.83
SNAP47-213ENST00000617596 MTX1Q13505 466 aa20.22■□□□□ 0.83
SNAP47-213ENST00000617596 NFIXQ14938 502 aa20.22■□□□□ 0.83
SNAP47-213ENST00000617596 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
SNAP47-213ENST00000617596 STK32BQ9NY57 414 aa20.21■□□□□ 0.83
SNAP47-213ENST00000617596 SH3TC1Q8TE82 1336 aa20.21■□□□□ 0.83
SNAP47-213ENST00000617596 RABL6Q3YEC7 729 aaPredicted RBP20.21■□□□□ 0.83
SNAP47-213ENST00000617596 ANKRD45Q5TZF3 282 aa20.21■□□□□ 0.83
SNAP47-213ENST00000617596 TUBGCP6Q96RT7 1819 aa20.2■□□□□ 0.82
SNAP47-213ENST00000617596 ERFEQ4G0M1 354 aa20.2■□□□□ 0.82
SNAP47-213ENST00000617596 UPF1Q92900 1129 aaKnown RBP eCLIP20.2■□□□□ 0.821e-6■■□□□ 13.1
SNAP47-213ENST00000617596 GCC1Q96CN9 775 aa20.2■□□□□ 0.82
SNAP47-213ENST00000617596 IPO9Q96P70 1041 aaKnown RBP20.2■□□□□ 0.82
SNAP47-213ENST00000617596 CDHR2Q9BYE9 1310 aa20.2■□□□□ 0.82
SNAP47-213ENST00000617596 RGL2O15211 777 aa20.19■□□□□ 0.82
SNAP47-213ENST00000617596 SURF6O75683 361 aaKnown RBP20.19■□□□□ 0.82
SNAP47-213ENST00000617596 NBPF5PQ86XG9 351 aaPredicted RBP20.19■□□□□ 0.82
SNAP47-213ENST00000617596 PDGFDQ9GZP0 370 aaPredicted RBP20.19■□□□□ 0.82
SNAP47-213ENST00000617596 SMARCA5O60264 1052 aaPredicted RBP20.19■□□□□ 0.82
SNAP47-213ENST00000617596 ANP32AP39687 249 aaKnown RBP20.19■□□□□ 0.82
SNAP47-213ENST00000617596 MSL1Q68DK7 614 aa20.19■□□□□ 0.82
SNAP47-213ENST00000617596 LNPKQ9C0E8 428 aa20.19■□□□□ 0.82
SNAP47-213ENST00000617596 GTF2E1P29083 439 aaPredicted RBP20.18■□□□□ 0.82
SNAP47-213ENST00000617596 RGS3P49796 1198 aa20.18■□□□□ 0.82
SNAP47-213ENST00000617596 SIL1Q9H173 461 aa20.18■□□□□ 0.82
SNAP47-213ENST00000617596 NUCB1Q02818 461 aa20.17■□□□□ 0.82
SNAP47-213ENST00000617596 FAM161AQ3B820 660 aa20.17■□□□□ 0.82
SNAP47-213ENST00000617596 PLA2G12BQ9BX93 195 aa20.17■□□□□ 0.82
SNAP47-213ENST00000617596 RFX5P48382 616 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms