RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 NEMFO60524 1076 aa17.93■□□□□ 0.46
PTPRT-210ENST00000617474 KRT18P05783 430 aaKnown RBP17.93■□□□□ 0.46
PTPRT-210ENST00000617474 CASQ1P31415 396 aa17.93■□□□□ 0.46
PTPRT-210ENST00000617474 GSDMDP57764 484 aa17.93■□□□□ 0.46
PTPRT-210ENST00000617474 GNG11P61952 73 aa17.93■□□□□ 0.46
PTPRT-210ENST00000617474 CWF19L2Q2TBE0 894 aaKnown RBP17.93■□□□□ 0.46
PTPRT-210ENST00000617474 NMIQ13287 307 aaPredicted RBP17.93■□□□□ 0.46
PTPRT-210ENST00000617474 SLC39A6Q13433 755 aa17.93■□□□□ 0.46
PTPRT-210ENST00000617474 WDR62O43379 1518 aa17.93■□□□□ 0.46
PTPRT-210ENST00000617474 DNAI1Q9UI46 699 aa17.93■□□□□ 0.46
PTPRT-210ENST00000617474 LMOD1P29536 600 aaPredicted RBP17.93■□□□□ 0.46
PTPRT-210ENST00000617474 Q6ZUG5 572 aa17.93■□□□□ 0.46
PTPRT-210ENST00000617474 CCDC43Q96MW1 224 aaKnown RBP17.93■□□□□ 0.46
PTPRT-210ENST00000617474 DNA2P51530 1060 aa17.92■□□□□ 0.46
PTPRT-210ENST00000617474 ZFYVE27Q5T4F4 411 aa17.92■□□□□ 0.46
PTPRT-210ENST00000617474 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
PTPRT-210ENST00000617474 IFIT3O14879 490 aaKnown RBP17.92■□□□□ 0.46
PTPRT-210ENST00000617474 KIF5CO60282 957 aa17.92■□□□□ 0.46
PTPRT-210ENST00000617474 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
PTPRT-210ENST00000617474 JAKMIP3Q5VZ66 844 aa17.92■□□□□ 0.46
PTPRT-210ENST00000617474 INTS4Q96HW7 963 aaKnown RBP17.92■□□□□ 0.46
PTPRT-210ENST00000617474 CTTNBP2Q8WZ74 1663 aa17.92■□□□□ 0.46
PTPRT-210ENST00000617474 GPTP24298 496 aa17.91■□□□□ 0.46
PTPRT-210ENST00000617474 MARCKSP29966 332 aaPredicted RBP17.91■□□□□ 0.46
PTPRT-210ENST00000617474 GNL3LQ9NVN8 582 aaKnown RBP17.91■□□□□ 0.46
PTPRT-210ENST00000617474 PAXBP1Q9Y5B6 917 aa17.91■□□□□ 0.46
PTPRT-210ENST00000617474 DUOX2Q9NRD8 1548 aa17.91■□□□□ 0.46
PTPRT-210ENST00000617474 GOLGA8AA7E2F4 631 aa17.91■□□□□ 0.46
PTPRT-210ENST00000617474 PLCH2O75038 1416 aa17.9■□□□□ 0.46
PTPRT-210ENST00000617474 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
PTPRT-210ENST00000617474 WASF1Q92558 559 aa17.9■□□□□ 0.46
PTPRT-210ENST00000617474 SLC12A7Q9Y666 1083 aa17.9■□□□□ 0.46
PTPRT-210ENST00000617474 ZNF445P59923 1031 aa17.9■□□□□ 0.46
PTPRT-210ENST00000617474 IFIT5Q13325 482 aaKnown RBP17.9■□□□□ 0.46
PTPRT-210ENST00000617474 CRACR2AQ9BSW2 395 aa17.9■□□□□ 0.46
PTPRT-210ENST00000617474 ZSCAN16Q9H4T2 348 aaPredicted RBP17.9■□□□□ 0.46
PTPRT-210ENST00000617474 HMG20BQ9P0W2 317 aa17.9■□□□□ 0.46
PTPRT-210ENST00000617474 NPHP3Q7Z494 1330 aa17.89■□□□□ 0.46
PTPRT-210ENST00000617474 GSPT1P15170 499 aaKnown RBP17.89■□□□□ 0.45
PTPRT-210ENST00000617474 CREB3L3Q68CJ9 461 aa17.89■□□□□ 0.45
PTPRT-210ENST00000617474 COPS6Q7L5N1 327 aa17.89■□□□□ 0.45
PTPRT-210ENST00000617474 AKAP2Q9Y2D5 859 aa17.89■□□□□ 0.45
PTPRT-210ENST00000617474 CD2BP2O95400 341 aaKnown RBP17.89■□□□□ 0.45
PTPRT-210ENST00000617474 IARSP41252 1262 aaKnown RBP17.89■□□□□ 0.45
PTPRT-210ENST00000617474 TAF3Q5VWG9 929 aa17.89■□□□□ 0.45
PTPRT-210ENST00000617474 ANKLE2Q86XL3 938 aa17.89■□□□□ 0.45
PTPRT-210ENST00000617474 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.45
PTPRT-210ENST00000617474 SOS1Q07889 1333 aaPredicted RBP17.89■□□□□ 0.45
PTPRT-210ENST00000617474 PNMA6EA0A0J9YXQ4 647 aa17.89■□□□□ 0.45
PTPRT-210ENST00000617474 DNMT1P26358 1616 aaKnown RBP17.89■□□□□ 0.45
PTPRT-210ENST00000617474 NPC1L1Q9UHC9 1359 aa17.88■□□□□ 0.45
PTPRT-210ENST00000617474 GRM8O00222 908 aa17.88■□□□□ 0.45
PTPRT-210ENST00000617474 UBASH3AP57075 661 aa17.88■□□□□ 0.45
PTPRT-210ENST00000617474 XAGE3Q8WTP9 111 aa17.88■□□□□ 0.45
PTPRT-210ENST00000617474 ITSN2Q9NZM3 1697 aa17.88■□□□□ 0.45
PTPRT-210ENST00000617474 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
PTPRT-210ENST00000617474 RANBP6O60518 1105 aaKnown RBP17.88■□□□□ 0.45
PTPRT-210ENST00000617474 RDXP35241 583 aaKnown RBP17.88■□□□□ 0.45
PTPRT-210ENST00000617474 KRT222Q8N1A0 295 aa17.88■□□□□ 0.45
PTPRT-210ENST00000617474 ENOX2Q16206 610 aaKnown RBP17.88■□□□□ 0.45
PTPRT-210ENST00000617474 BICDL1Q6ZP65 573 aa17.88■□□□□ 0.45
PTPRT-210ENST00000617474 ANKRD13DQ6ZTN6 518 aa17.88■□□□□ 0.45
PTPRT-210ENST00000617474 CCDC12Q8WUD4 166 aaPredicted RBP17.88■□□□□ 0.45
PTPRT-210ENST00000617474 KIAA0754O94854 1291 aa17.87■□□□□ 0.45
PTPRT-210ENST00000617474 CAVIN2O95810 425 aa17.87■□□□□ 0.45
PTPRT-210ENST00000617474 SYKP43405 635 aa17.87■□□□□ 0.45
PTPRT-210ENST00000617474 NUP88Q99567 741 aaPredicted RBP17.87■□□□□ 0.45
PTPRT-210ENST00000617474 BMS1Q14692 1282 aaKnown RBP17.87■□□□□ 0.45
PTPRT-210ENST00000617474 EYA1Q99502 592 aa17.87■□□□□ 0.45
PTPRT-210ENST00000617474 KDM6BO15054 1643 aa17.87■□□□□ 0.45
PTPRT-210ENST00000617474 IBSPP21815 317 aaPredicted RBP17.87■□□□□ 0.45
PTPRT-210ENST00000617474 LMAN1P49257 510 aa17.87■□□□□ 0.45
PTPRT-210ENST00000617474 MRPS27Q92552 414 aaKnown RBP17.87■□□□□ 0.45
PTPRT-210ENST00000617474 CCDC94Q9BW85 323 aaPredicted RBP17.87■□□□□ 0.45
PTPRT-210ENST00000617474 CCDC102BQ68D86 513 aa17.86■□□□□ 0.45
PTPRT-210ENST00000617474 SLC26A6Q9BXS9 759 aa17.86■□□□□ 0.45
PTPRT-210ENST00000617474 LMBR1LQ6UX01 489 aa17.86■□□□□ 0.45
PTPRT-210ENST00000617474 CEP131Q9UPN4 1083 aa17.86■□□□□ 0.45
PTPRT-210ENST00000617474 APOBRQ0VD83 1088 aa17.86■□□□□ 0.45
PTPRT-210ENST00000617474 LDHAL6AQ6ZMR3 332 aa17.86■□□□□ 0.45
PTPRT-210ENST00000617474 LIG1P18858 919 aa17.86■□□□□ 0.45
PTPRT-210ENST00000617474 SOGA3Q5TF21 947 aa17.86■□□□□ 0.45
PTPRT-210ENST00000617474 LRRC59Q96AG4 307 aaKnown RBP17.86■□□□□ 0.45
PTPRT-210ENST00000617474 CALCOCO1Q9P1Z2 691 aa17.86■□□□□ 0.45
PTPRT-210ENST00000617474 CCDC171Q6TFL3 1326 aa17.85■□□□□ 0.45
PTPRT-210ENST00000617474 GOLGA6L10A6NI86 522 aa17.85■□□□□ 0.45
PTPRT-210ENST00000617474 METAP2P50579 478 aaKnown RBP eCLIP17.85■□□□□ 0.45
PTPRT-210ENST00000617474 HSP90AB3PQ58FF7 597 aa17.85■□□□□ 0.45
PTPRT-210ENST00000617474 ODF2Q5BJF6 829 aa17.85■□□□□ 0.45
PTPRT-210ENST00000617474 TMEM67Q5HYA8 995 aa17.85■□□□□ 0.45
PTPRT-210ENST00000617474 MAGI2Q86UL8 1455 aa17.85■□□□□ 0.45
PTPRT-210ENST00000617474 CCDC148Q8NFR7 591 aa17.85■□□□□ 0.45
PTPRT-210ENST00000617474 SSRP1Q08945 709 aaKnown RBP17.84■□□□□ 0.45
PTPRT-210ENST00000617474 KLHDC4Q8TBB5 520 aa17.84■□□□□ 0.45
PTPRT-210ENST00000617474 EIF2AK4Q9P2K8 1649 aaKnown RBP17.84■□□□□ 0.45
PTPRT-210ENST00000617474 MCM6Q14566 821 aa17.84■□□□□ 0.45
PTPRT-210ENST00000617474 TRMT2AQ8IZ69 625 aaKnown RBP17.84■□□□□ 0.45
PTPRT-210ENST00000617474 KSR2Q6VAB6 950 aa17.84■□□□□ 0.45
PTPRT-210ENST00000617474 ANTXR1Q9H6X2 564 aa17.84■□□□□ 0.45
PTPRT-210ENST00000617474 RIOK3O14730 519 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms