RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.19
PCDHGA9-202ENST00000616887 A1BGP04217 495 aa13.83□□□□□ -0.2
PCDHGA9-202ENST00000616887 KCNA4P22459 653 aa13.83□□□□□ -0.2
PCDHGA9-202ENST00000616887 NASPP49321 788 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA9-202ENST00000616887 RABEP1Q15276 862 aa13.83□□□□□ -0.2
PCDHGA9-202ENST00000616887 C8orf37Q96NL8 207 aa13.83□□□□□ -0.2
PCDHGA9-202ENST00000616887 BTG4Q9NY30 223 aa13.83□□□□□ -0.2
PCDHGA9-202ENST00000616887 TLR7Q9NYK1 1049 aaKnown RBP13.83□□□□□ -0.2
PCDHGA9-202ENST00000616887 SASH1O94885 1247 aa13.82□□□□□ -0.2
PCDHGA9-202ENST00000616887 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
PCDHGA9-202ENST00000616887 UBE3BQ7Z3V4 1068 aa13.82□□□□□ -0.2
PCDHGA9-202ENST00000616887 ANP32BQ92688 251 aaKnown RBP13.82□□□□□ -0.2
PCDHGA9-202ENST00000616887 CARD10Q9BWT7 1032 aa13.82□□□□□ -0.2
PCDHGA9-202ENST00000616887 COL14A1Q05707 1796 aaKnown RBP13.82□□□□□ -0.2
PCDHGA9-202ENST00000616887 NEXNQ0ZGT2 675 aa13.82□□□□□ -0.2
PCDHGA9-202ENST00000616887 UTYO14607 1347 aa13.82□□□□□ -0.2
PCDHGA9-202ENST00000616887 PARP4Q9UKK3 1724 aaKnown RBP13.81□□□□□ -0.2
PCDHGA9-202ENST00000616887 NOL8Q76FK4 1167 aaKnown RBP13.81□□□□□ -0.2
PCDHGA9-202ENST00000616887 AACSQ86V21 672 aa13.81□□□□□ -0.2
PCDHGA9-202ENST00000616887 TNPO1Q92973 898 aaKnown RBP13.81□□□□□ -0.2
PCDHGA9-202ENST00000616887 CCDC8Q9H0W5 538 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA9-202ENST00000616887 DMTNQ08495 405 aa13.8□□□□□ -0.2
PCDHGA9-202ENST00000616887 CLASRPQ8N2M8 674 aaKnown RBP13.8□□□□□ -0.2
PCDHGA9-202ENST00000616887 EAF2Q96CJ1 260 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA9-202ENST00000616887 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA9-202ENST00000616887 PKP1Q13835 747 aa13.8□□□□□ -0.2
PCDHGA9-202ENST00000616887 ZGPATQ8N5A5 531 aaKnown RBP13.8□□□□□ -0.2
PCDHGA9-202ENST00000616887 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
PCDHGA9-202ENST00000616887 ZBTB3Q9H5J0 574 aa13.8□□□□□ -0.2
PCDHGA9-202ENST00000616887 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
PCDHGA9-202ENST00000616887 AOX1Q06278 1338 aa13.79□□□□□ -0.2
PCDHGA9-202ENST00000616887 SHANK3Q9BYB0 1731 aa13.79□□□□□ -0.2
PCDHGA9-202ENST00000616887 GTF2E1P29083 439 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA9-202ENST00000616887 HSP90AB4PQ58FF6 505 aa13.79□□□□□ -0.2
PCDHGA9-202ENST00000616887 CWC27Q6UX04 472 aaKnown RBP13.79□□□□□ -0.2
PCDHGA9-202ENST00000616887 UPF3BQ9BZI7 483 aaKnown RBP13.79□□□□□ -0.2
PCDHGA9-202ENST00000616887 KCPQ6ZWJ8 1503 aa13.79□□□□□ -0.2
PCDHGA9-202ENST00000616887 A0A087WZG4 1122 aa13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 SSFA2P28290 1259 aa13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 ASAP1Q9ULH1 1129 aa13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 IFIT2P09913 472 aaKnown RBP13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 NEK4P51957 841 aa13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 TAF7LQ5H9L4 462 aa13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 UTP14CQ5TAP6 766 aaKnown RBP13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 ZSCAN20P17040 1043 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 SKOR2Q2VWA4 1001 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA9-202ENST00000616887 DYNC1I1O14576 645 aa13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 G3BP1Q13283 466 aaKnown RBP eCLIP13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 RAB3GAP1Q15042 981 aa13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 NKX1-1Q15270 411 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 GBP4Q96PP9 640 aa13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 ECHDC1Q9NTX5 307 aa13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 NDUFB9Q9Y6M9 179 aa13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 PLBD2Q8NHP8 589 aa13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 AFF2P51816 1311 aa13.77□□□□□ -0.21
PCDHGA9-202ENST00000616887 SLIT2O94813 1529 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 USP42Q9H9J4 1324 aaKnown RBP13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 SGSM2O43147 1006 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 GLRX3O76003 335 aaKnown RBP13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 EDC3Q96F86 508 aaKnown RBP13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 CCDC9Q9Y3X0 531 aaKnown RBP13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 ARFGEF2Q9Y6D5 1785 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 ST18O60284 1047 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 RFX5P48382 616 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 CASP7P55210 303 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 PTPN12Q05209 780 aaKnown RBP13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 FNBP4Q8N3X1 1017 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 PIGBQ92521 554 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 CHAMP1Q96JM3 812 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 BOLA2Q9H3K6 86 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 TAOK2Q9UL54 1235 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 CHMP3Q9Y3E7 222 aa13.76□□□□□ -0.21
PCDHGA9-202ENST00000616887 TTC41PQ6P2S7 1318 aa13.75□□□□□ -0.21
PCDHGA9-202ENST00000616887 CCDC94Q9BW85 323 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA9-202ENST00000616887 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
PCDHGA9-202ENST00000616887 USP21Q9UK80 565 aa13.75□□□□□ -0.21
PCDHGA9-202ENST00000616887 BCL9LQ86UU0 1499 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 NWD2Q9ULI1 1742 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 ZNF500O60304 480 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 CHGBP05060 677 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 LMBR1LQ6UX01 489 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 DNAJC10Q8IXB1 793 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 NOL7Q9UMY1 257 aaKnown RBP13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 LAMB4A4D0S4 1761 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 TNS2Q63HR2 1409 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 TFCP2Q12800 502 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 PPP4R3BQ5MIZ7 849 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 FAM227BQ96M60 508 aa13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 NAP1L2Q9ULW6 460 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA9-202ENST00000616887 UBR2Q8IWV8 1755 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms