RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
COL12A1-211ENST00000615798 PDZRN3Q9UPQ7 1066 aa10.63□□□□□ -0.71
COL12A1-211ENST00000615798 ARHGEF5Q12774 1597 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 XPCQ01831 940 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-211ENST00000615798 TRPC3Q13507 836 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 STK38Q15208 465 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 CCDC144CPQ8IYA2 1237 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 FKBP5Q13451 457 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-211ENST00000615798 ZRANB2O95218 330 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL12A1-211ENST00000615798 SMARCC2Q8TAQ2 1214 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 ATP2A3Q93084 1043 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 SATB1Q01826 763 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 FIBPO43427 364 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 ARHGAP45Q92619 1136 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 PPP1R12CQ9BZL4 782 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 NUCKS1Q9H1E3 243 aaKnown RBP10.62□□□□□ -0.71
COL12A1-211ENST00000615798 LARSQ9P2J5 1176 aaKnown RBP10.62□□□□□ -0.71
COL12A1-211ENST00000615798 DHX16O60231 1041 aaKnown RBP10.62□□□□□ -0.71
COL12A1-211ENST00000615798 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-211ENST00000615798 NUCB1Q02818 461 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 KRBA2Q6ZNG9 492 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 POLR3AO14802 1390 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-211ENST00000615798 INPP5BP32019 993 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 CAPZA3Q96KX2 299 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 SAMD15Q9P1V8 674 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 PSMD7P51665 324 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 TWISTNBQ3B726 338 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-211ENST00000615798 VPS36Q86VN1 386 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 NUB1Q9Y5A7 615 aa10.62□□□□□ -0.71
COL12A1-211ENST00000615798 CLIP2Q9UDT6 1046 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 COL17A1Q9UMD9 1497 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-211ENST00000615798 UPF3BQ9BZI7 483 aaKnown RBP10.61□□□□□ -0.71
COL12A1-211ENST00000615798 G3V3G9 751 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 DCAF8Q5TAQ9 597 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 COG7P83436 770 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 ARMC9Q7Z3E5 817 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 EFCC1Q9HA90 598 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 GNAI2P04899 355 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 G3BP1Q13283 466 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL12A1-211ENST00000615798 A6NNZ2 444 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 UBTFL1P0CB47 393 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-211ENST00000615798 TUBB8Q3ZCM7 444 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 DAAM1Q9Y4D1 1078 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 PLCH2O75038 1416 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 KLHDC4Q8TBB5 520 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 ARHGAP25P42331 645 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 TTC5Q8N0Z6 440 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 EHBP1Q8NDI1 1231 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 ERCC6LQ2NKX8 1250 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 GSDMBQ8TAX9 411 aa10.61□□□□□ -0.71
COL12A1-211ENST00000615798 CHD1LQ86WJ1 897 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 SNW1Q13573 536 aaKnown RBP10.6□□□□□ -0.71
COL12A1-211ENST00000615798 GJC2Q5T442 439 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-211ENST00000615798 AFAP1Q8N556 730 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 LNPKQ9C0E8 428 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 CTAGE5O15320 804 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 CCDC172P0C7W6 258 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 KLHL34Q8N239 644 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 CTAGE9A4FU28 777 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 EIF5P55010 431 aaKnown RBP10.6□□□□□ -0.71
COL12A1-211ENST00000615798 GABPB1Q06547 395 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-211ENST00000615798 MPNDQ8N594 471 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 RMDN2Q96LZ7 410 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 TMEM132AQ24JP5 1023 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 CEP85LQ5SZL2 805 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL12A1-211ENST00000615798 MAST1Q9Y2H9 1570 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 MLECQ14165 292 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 PTPRKQ15262 1439 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 LARP1Q6PKG0 1096 aaKnown RBP10.6□□□□□ -0.71
COL12A1-211ENST00000615798 KRT85P78386 507 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 MAP3K11Q16584 847 aa10.6□□□□□ -0.71
COL12A1-211ENST00000615798 KRT18P05783 430 aaKnown RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 MICAL1Q8TDZ2 1067 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 SEC62Q99442 399 aaKnown RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 POGZQ7Z3K3 1410 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 PRC1O43663 620 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 RAP1GDS1P52306 607 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 SKOR1P84550 965 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 TSPYL4Q9UJ04 414 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 CAVIN2O95810 425 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 RBM26Q5T8P6 1007 aaKnown RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 RALYLQ86SE5 291 aaKnown RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 NUP62CLQ9H1M0 184 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 MRFAP1Q9Y605 127 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 ZKSCAN8Q15776 578 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 ARHGAP24Q8N264 748 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 CTNNBL1Q8WYA6 563 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 TTC19Q6DKK2 380 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 INTS8Q75QN2 995 aaKnown RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 ALDH3A1P30838 453 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 MCM4P33991 863 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 EPSTI1Q96J88 318 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 JADE2Q9NQC1 790 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 CPLX4Q7Z7G2 160 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 C16orf45Q96MC5 204 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-211ENST00000615798 TANGO6Q9C0B7 1094 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms