RNA–Protein interactions for RNA: ENST00000615088.1

AL109954.3-201, humanhuman

BASIC

Gene AL109954.3, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.3-201ENST00000615088 RBM46Q8TBY0 533 aaKnown RBP16.53■□□□□ 0.24
AL109954.3-201ENST00000615088 C7orf43Q8WVR3 580 aa16.53■□□□□ 0.24
AL109954.3-201ENST00000615088 RBM17Q96I25 401 aaKnown RBP16.53■□□□□ 0.24
AL109954.3-201ENST00000615088 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
AL109954.3-201ENST00000615088 ARFGEF2Q9Y6D5 1785 aa16.53■□□□□ 0.24
AL109954.3-201ENST00000615088 SLX4Q8IY92 1834 aa16.52■□□□□ 0.24
AL109954.3-201ENST00000615088 FKBP4Q02790 459 aaKnown RBP eCLIP16.52■□□□□ 0.24
AL109954.3-201ENST00000615088 CCDC184Q52MB2 194 aa16.52■□□□□ 0.24
AL109954.3-201ENST00000615088 NLRP3Q96P20 1036 aa16.52■□□□□ 0.24
AL109954.3-201ENST00000615088 CHMP4AQ9BY43 222 aa16.52■□□□□ 0.24
AL109954.3-201ENST00000615088 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
AL109954.3-201ENST00000615088 VEGFAP15692 232 aaPredicted RBP16.51■□□□□ 0.23
AL109954.3-201ENST00000615088 TCIRG1Q13488 830 aa16.51■□□□□ 0.23
AL109954.3-201ENST00000615088 CC2D2BQ6DHV5 1058 aa16.51■□□□□ 0.23
AL109954.3-201ENST00000615088 PLBD2Q8NHP8 589 aa16.51■□□□□ 0.23
AL109954.3-201ENST00000615088 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
AL109954.3-201ENST00000615088 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
AL109954.3-201ENST00000615088 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
AL109954.3-201ENST00000615088 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
AL109954.3-201ENST00000615088 NLRP10Q86W26 655 aa16.5■□□□□ 0.23
AL109954.3-201ENST00000615088 CRAMP1Q96RY5 1269 aa16.5■□□□□ 0.23
AL109954.3-201ENST00000615088 TMX4Q9H1E5 349 aaPredicted RBP16.5■□□□□ 0.23
AL109954.3-201ENST00000615088 CACNA1SQ13698 1873 aa16.5■□□□□ 0.23
AL109954.3-201ENST00000615088 FER1L6Q2WGJ9 1857 aa16.5■□□□□ 0.23
AL109954.3-201ENST00000615088 APLP1P51693 650 aa16.49■□□□□ 0.23
AL109954.3-201ENST00000615088 FSTL1Q12841 308 aa16.49■□□□□ 0.23
AL109954.3-201ENST00000615088 GRIPAP1Q4V328 841 aa16.49■□□□□ 0.23
AL109954.3-201ENST00000615088 SLC10A5Q5PT55 438 aa16.49■□□□□ 0.23
AL109954.3-201ENST00000615088 TRMT112Q9UI30 125 aaKnown RBP16.49■□□□□ 0.23
AL109954.3-201ENST00000615088 SH3TC1Q8TE82 1336 aa16.48■□□□□ 0.23
AL109954.3-201ENST00000615088 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
AL109954.3-201ENST00000615088 PPEF1O14829 653 aaPredicted RBP16.48■□□□□ 0.23
AL109954.3-201ENST00000615088 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
AL109954.3-201ENST00000615088 CCDC27Q2M243 656 aa16.48■□□□□ 0.23
AL109954.3-201ENST00000615088 OLFM4Q6UX06 510 aa16.48■□□□□ 0.23
AL109954.3-201ENST00000615088 SMC1BQ8NDV3 1235 aa16.48■□□□□ 0.23
AL109954.3-201ENST00000615088 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
AL109954.3-201ENST00000615088 ZNF277Q9NRM2 450 aaPredicted RBP16.47■□□□□ 0.23
AL109954.3-201ENST00000615088 IARSP41252 1262 aaKnown RBP16.46■□□□□ 0.23
AL109954.3-201ENST00000615088 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
AL109954.3-201ENST00000615088 C3orf67Q6ZVT6 689 aa16.46■□□□□ 0.23
AL109954.3-201ENST00000615088 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
AL109954.3-201ENST00000615088 PSMD1Q99460 953 aa16.46■□□□□ 0.23
AL109954.3-201ENST00000615088 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
AL109954.3-201ENST00000615088 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
AL109954.3-201ENST00000615088 WWC1Q8IX03 1113 aa16.45■□□□□ 0.22
AL109954.3-201ENST00000615088 C8orf58Q8NAV2 365 aa16.45■□□□□ 0.22
AL109954.3-201ENST00000615088 CCDC88AQ3V6T2 1871 aa16.45■□□□□ 0.22
AL109954.3-201ENST00000615088 ANKRD36CQ5JPF3 1778 aa16.44■□□□□ 0.22
AL109954.3-201ENST00000615088 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
AL109954.3-201ENST00000615088 DDNO94850 711 aaPredicted RBP16.44■□□□□ 0.22
AL109954.3-201ENST00000615088 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
AL109954.3-201ENST00000615088 DDX46Q7L014 1031 aaKnown RBP16.44■□□□□ 0.22
AL109954.3-201ENST00000615088 JDP2Q8WYK2 163 aa16.44■□□□□ 0.22
AL109954.3-201ENST00000615088 ISCA1Q9BUE6 129 aa16.44■□□□□ 0.22
AL109954.3-201ENST00000615088 IL16Q14005 1332 aa16.44■□□□□ 0.22
AL109954.3-201ENST00000615088 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
AL109954.3-201ENST00000615088 IQCA1LA6NCM1 817 aa16.43■□□□□ 0.22
AL109954.3-201ENST00000615088 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
AL109954.3-201ENST00000615088 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
AL109954.3-201ENST00000615088 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
AL109954.3-201ENST00000615088 DICER1Q9UPY3 1922 aaKnown RBP16.43■□□□□ 0.22
AL109954.3-201ENST00000615088 ABCC4O15439 1325 aa16.43■□□□□ 0.22
AL109954.3-201ENST00000615088 BBOX1O75936 387 aa16.42■□□□□ 0.22
AL109954.3-201ENST00000615088 TRIM28Q13263 835 aaKnown RBP16.42■□□□□ 0.22
AL109954.3-201ENST00000615088 STK31Q9BXU1 1019 aa16.42■□□□□ 0.22
AL109954.3-201ENST00000615088 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
AL109954.3-201ENST00000615088 POTECB2RU33 542 aa16.41■□□□□ 0.22
AL109954.3-201ENST00000615088 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
AL109954.3-201ENST00000615088 SUPT20HQ8NEM7 779 aa16.41■□□□□ 0.22
AL109954.3-201ENST00000615088 ZNF428Q96B54 188 aa16.41■□□□□ 0.22
AL109954.3-201ENST00000615088 FAM89AQ96GI7 184 aa16.41■□□□□ 0.22
AL109954.3-201ENST00000615088 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
AL109954.3-201ENST00000615088 FZD9O00144 591 aa16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 EIF6P56537 245 aaKnown RBP16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 GRAPQ13588 217 aa16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 LARGE2Q8N3Y3 721 aa16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 TSPYL6Q8N831 410 aa16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 GRAPLQ8TC17 118 aaPredicted RBP16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 L3MBTL3Q96JM7 780 aaPredicted RBP16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 MYD88Q99836 296 aa16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 ZNF541Q9H0D2 1346 aa16.4■□□□□ 0.22
AL109954.3-201ENST00000615088 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
AL109954.3-201ENST00000615088 WDR63Q8IWG1 891 aa16.39■□□□□ 0.21
AL109954.3-201ENST00000615088 SP8Q8IXZ3 490 aa16.39■□□□□ 0.21
AL109954.3-201ENST00000615088 NIM1KQ8IY84 436 aa16.39■□□□□ 0.21
AL109954.3-201ENST00000615088 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
AL109954.3-201ENST00000615088 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
AL109954.3-201ENST00000615088 IRS4O14654 1257 aaPredicted RBP16.38■□□□□ 0.21
AL109954.3-201ENST00000615088 PPIP5K2O43314 1243 aa16.38■□□□□ 0.21
AL109954.3-201ENST00000615088 RTL5Q5HYW3 569 aaPredicted RBP16.38■□□□□ 0.21
AL109954.3-201ENST00000615088 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
AL109954.3-201ENST00000615088 FAM9BQ8IZU0 186 aa16.38■□□□□ 0.21
AL109954.3-201ENST00000615088 MPNDQ8N594 471 aa16.38■□□□□ 0.21
AL109954.3-201ENST00000615088 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
AL109954.3-201ENST00000615088 HACL1Q9UJ83 578 aa16.38■□□□□ 0.21
AL109954.3-201ENST00000615088 SF3B3Q15393 1217 aaKnown RBP16.37■□□□□ 0.21
AL109954.3-201ENST00000615088 CHADLQ6NUI6 762 aa16.37■□□□□ 0.21
AL109954.3-201ENST00000615088 GPC2Q8N158 579 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms