RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 TEFQ10587 303 aa17.07■□□□□ 0.32
PTPN20CP-201ENST00000614090 CRY2Q49AN0 593 aa17.07■□□□□ 0.32
PTPN20CP-201ENST00000614090 NIM1KQ8IY84 436 aa17.07■□□□□ 0.32
PTPN20CP-201ENST00000614090 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
PTPN20CP-201ENST00000614090 PGAP2Q9UHJ9 254 aa17.07■□□□□ 0.32
PTPN20CP-201ENST00000614090 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
PTPN20CP-201ENST00000614090 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
PTPN20CP-201ENST00000614090 ZC3H15Q8WU90 426 aaKnown RBP17.06■□□□□ 0.32
PTPN20CP-201ENST00000614090 CDHR2Q9BYE9 1310 aa17.05■□□□□ 0.32
PTPN20CP-201ENST00000614090 HUNKP57058 714 aa17.05■□□□□ 0.32
PTPN20CP-201ENST00000614090 CTU1Q7Z7A3 348 aaKnown RBP17.05■□□□□ 0.32
PTPN20CP-201ENST00000614090 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
PTPN20CP-201ENST00000614090 POLR2AP24928 1970 aaKnown RBP17.04■□□□□ 0.32
PTPN20CP-201ENST00000614090 CDC37L1Q7L3B6 337 aa17.04■□□□□ 0.32
PTPN20CP-201ENST00000614090 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
PTPN20CP-201ENST00000614090 ABCC12Q96J65 1359 aa17.03■□□□□ 0.32
PTPN20CP-201ENST00000614090 NPC1L1Q9UHC9 1359 aa17.03■□□□□ 0.32
PTPN20CP-201ENST00000614090 NUP98P52948 1817 aa17.03■□□□□ 0.32
PTPN20CP-201ENST00000614090 FAM155AB1AL88 458 aaPredicted RBP17.03■□□□□ 0.32
PTPN20CP-201ENST00000614090 FAM177BA6PVY3 158 aa17.02■□□□□ 0.32
PTPN20CP-201ENST00000614090 PPIP5K2O43314 1243 aa17.02■□□□□ 0.32
PTPN20CP-201ENST00000614090 GTF2E1P29083 439 aaPredicted RBP17.02■□□□□ 0.32
PTPN20CP-201ENST00000614090 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
PTPN20CP-201ENST00000614090 IL17REQ8NFR9 667 aa17.02■□□□□ 0.32
PTPN20CP-201ENST00000614090 PANK3Q9H999 370 aa17.02■□□□□ 0.32
PTPN20CP-201ENST00000614090 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
PTPN20CP-201ENST00000614090 HOXA10P31260 410 aaPredicted RBP17.01■□□□□ 0.31
PTPN20CP-201ENST00000614090 GMPSP49915 693 aaPredicted RBP17.01■□□□□ 0.31
PTPN20CP-201ENST00000614090 RGMBQ6NW40 437 aa17.01■□□□□ 0.31
PTPN20CP-201ENST00000614090 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
PTPN20CP-201ENST00000614090 RNF186Q9NXI6 227 aa17.01■□□□□ 0.31
PTPN20CP-201ENST00000614090 HPS5Q9UPZ3 1129 aa17.01■□□□□ 0.31
PTPN20CP-201ENST00000614090 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
PTPN20CP-201ENST00000614090 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
PTPN20CP-201ENST00000614090 TRPA1O75762 1119 aa17■□□□□ 0.31
PTPN20CP-201ENST00000614090 CXCL9Q07325 125 aa17■□□□□ 0.31
PTPN20CP-201ENST00000614090 HABP4Q5JVS0 413 aaKnown RBP17■□□□□ 0.31
PTPN20CP-201ENST00000614090 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
PTPN20CP-201ENST00000614090 CCDC102AQ96A19 550 aa17■□□□□ 0.31
PTPN20CP-201ENST00000614090 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
PTPN20CP-201ENST00000614090 HIRAP54198 1017 aaPredicted RBP16.99■□□□□ 0.31
PTPN20CP-201ENST00000614090 KIF23Q02241 960 aaPredicted RBP16.99■□□□□ 0.31
PTPN20CP-201ENST00000614090 AOC3Q16853 763 aa16.99■□□□□ 0.31
PTPN20CP-201ENST00000614090 TRPM4Q8TD43 1214 aa16.99■□□□□ 0.31
PTPN20CP-201ENST00000614090 NYXQ9GZU5 481 aa16.99■□□□□ 0.31
PTPN20CP-201ENST00000614090 ZNRF3Q9ULT6 936 aa16.99■□□□□ 0.31
PTPN20CP-201ENST00000614090 LAMB4A4D0S4 1761 aa16.98■□□□□ 0.31
PTPN20CP-201ENST00000614090 PPEF1O14829 653 aaPredicted RBP16.98■□□□□ 0.31
PTPN20CP-201ENST00000614090 PKN2Q16513 984 aaKnown RBP16.98■□□□□ 0.31
PTPN20CP-201ENST00000614090 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
PTPN20CP-201ENST00000614090 KCNQ3O43525 872 aa16.97■□□□□ 0.31
PTPN20CP-201ENST00000614090 SLC51AQ86UW1 340 aa16.97■□□□□ 0.31
PTPN20CP-201ENST00000614090 CRAMP1Q96RY5 1269 aa16.97■□□□□ 0.31
PTPN20CP-201ENST00000614090 GBA2Q9HCG7 927 aaPredicted RBP16.97■□□□□ 0.31
PTPN20CP-201ENST00000614090 IBTKQ9P2D0 1353 aaPredicted RBP16.97■□□□□ 0.31
PTPN20CP-201ENST00000614090 BTBD11A6QL63 1104 aa16.96■□□□□ 0.31
PTPN20CP-201ENST00000614090 HLFQ16534 295 aa16.96■□□□□ 0.31
PTPN20CP-201ENST00000614090 USP48Q86UV5 1035 aa16.96■□□□□ 0.31
PTPN20CP-201ENST00000614090 NUTM1Q86Y26 1132 aa16.96■□□□□ 0.31
PTPN20CP-201ENST00000614090 RBM17Q96I25 401 aaKnown RBP16.96■□□□□ 0.31
PTPN20CP-201ENST00000614090 BCL2L13Q9BXK5 485 aa16.96■□□□□ 0.31
PTPN20CP-201ENST00000614090 PRAMEF22A3QJZ6 481 aa16.95■□□□□ 0.3
PTPN20CP-201ENST00000614090 NBPF26B4DH59 902 aa16.95■□□□□ 0.3
PTPN20CP-201ENST00000614090 SNRPA1P09661 255 aaKnown RBP16.95■□□□□ 0.3
PTPN20CP-201ENST00000614090 ZNF157P51786 506 aaPredicted RBP16.95■□□□□ 0.3
PTPN20CP-201ENST00000614090 NBPF10Q6P3W6 841 aaKnown RBP16.95■□□□□ 0.3
PTPN20CP-201ENST00000614090 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
PTPN20CP-201ENST00000614090 SUPT20HQ8NEM7 779 aa16.95■□□□□ 0.3
PTPN20CP-201ENST00000614090 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
PTPN20CP-201ENST00000614090 SLC10A3P09131 477 aa16.94■□□□□ 0.3
PTPN20CP-201ENST00000614090 TNIP1Q15025 636 aa16.94■□□□□ 0.3
PTPN20CP-201ENST00000614090 CSRNP1Q96S65 589 aa16.94■□□□□ 0.3
PTPN20CP-201ENST00000614090 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
PTPN20CP-201ENST00000614090 TMX4Q9H1E5 349 aaPredicted RBP16.94■□□□□ 0.3
PTPN20CP-201ENST00000614090 MKI67P46013 3256 aaKnown RBP16.94■□□□□ 0.3
PTPN20CP-201ENST00000614090 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
PTPN20CP-201ENST00000614090 REM2Q8IYK8 340 aaPredicted RBP16.93■□□□□ 0.3
PTPN20CP-201ENST00000614090 CNOT7Q9UIV1 285 aaKnown RBP16.93■□□□□ 0.3
PTPN20CP-201ENST00000614090 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
PTPN20CP-201ENST00000614090 H7C1D1 291 aa16.92■□□□□ 0.3
PTPN20CP-201ENST00000614090 KRT26Q7Z3Y9 468 aa16.92■□□□□ 0.3
PTPN20CP-201ENST00000614090 ATP6V0A2Q9Y487 856 aa16.92■□□□□ 0.3
PTPN20CP-201ENST00000614090 KIAA0100Q14667 2235 aaKnown RBP16.91■□□□□ 0.3
PTPN20CP-201ENST00000614090 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
PTPN20CP-201ENST00000614090 RAD17O75943 681 aa16.91■□□□□ 0.3
PTPN20CP-201ENST00000614090 KIAA2012Q0VF49 1180 aa16.91■□□□□ 0.3
PTPN20CP-201ENST00000614090 DLK2Q6UY11 383 aa16.91■□□□□ 0.3
PTPN20CP-201ENST00000614090 MICALL2Q8IY33 904 aa16.91■□□□□ 0.3
PTPN20CP-201ENST00000614090 HDAC9Q9UKV0 1011 aa16.91■□□□□ 0.3
PTPN20CP-201ENST00000614090 RBBP6Q7Z6E9 1792 aaKnown RBP16.91■□□□□ 0.3
PTPN20CP-201ENST00000614090 LAMB2P55268 1798 aa16.9■□□□□ 0.3
PTPN20CP-201ENST00000614090 ERVV-1B6SEH8 477 aa16.9■□□□□ 0.3
PTPN20CP-201ENST00000614090 FXR1P51114 621 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPN20CP-201ENST00000614090 COL3A1P02461 1466 aaPredicted RBP16.9■□□□□ 0.3
PTPN20CP-201ENST00000614090 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.3
PTPN20CP-201ENST00000614090 UBN2Q6ZU65 1347 aa16.89■□□□□ 0.29
PTPN20CP-201ENST00000614090 CEP290O15078 2479 aa16.89■□□□□ 0.29
PTPN20CP-201ENST00000614090 DDX60Q8IY21 1712 aaKnown RBP16.88■□□□□ 0.29
PTPN20CP-201ENST00000614090 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
PTPN20CP-201ENST00000614090 FBXO46Q6PJ61 603 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms