RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 ALDH1L1O75891 902 aa19.61■□□□□ 0.73
CCL3-206ENST00000614051 ISCA1Q9BUE6 129 aa19.61■□□□□ 0.73
CCL3-206ENST00000614051 QSER1Q2KHR3 1735 aa19.61■□□□□ 0.73
CCL3-206ENST00000614051 JARID2Q92833 1246 aaPredicted RBP19.6■□□□□ 0.73
CCL3-206ENST00000614051 USP44Q9H0E7 712 aa19.6■□□□□ 0.73
CCL3-206ENST00000614051 ZNF34Q8IZ26 560 aa19.6■□□□□ 0.73
CCL3-206ENST00000614051 UBN2Q6ZU65 1347 aa19.59■□□□□ 0.73
CCL3-206ENST00000614051 GCKRQ14397 625 aa19.59■□□□□ 0.73
CCL3-206ENST00000614051 HSP90AB3PQ58FF7 597 aa19.59■□□□□ 0.73
CCL3-206ENST00000614051 C1orf115Q9H7X2 142 aa19.59■□□□□ 0.73
CCL3-206ENST00000614051 ZBTB40Q9NUA8 1239 aa19.59■□□□□ 0.73
CCL3-206ENST00000614051 ZNF652Q9Y2D9 606 aa19.59■□□□□ 0.73
CCL3-206ENST00000614051 NBPF7P0C2Y1 421 aaPredicted RBP19.58■□□□□ 0.72
CCL3-206ENST00000614051 TBC1D9BQ66K14 1250 aa19.58■□□□□ 0.72
CCL3-206ENST00000614051 CLEC4GQ6UXB4 293 aa19.58■□□□□ 0.72
CCL3-206ENST00000614051 BICDL1Q6ZP65 573 aa19.58■□□□□ 0.72
CCL3-206ENST00000614051 NLRP10Q86W26 655 aa19.58■□□□□ 0.72
CCL3-206ENST00000614051 CWC25Q9NXE8 425 aaPredicted RBP19.58■□□□□ 0.72
CCL3-206ENST00000614051 GYS1P13807 737 aa19.57■□□□□ 0.72
CCL3-206ENST00000614051 C9orf78Q9NZ63 289 aaPredicted RBP19.57■□□□□ 0.72
CCL3-206ENST00000614051 NIP7Q9Y221 180 aaKnown RBP eCLIP19.57■□□□□ 0.72
CCL3-206ENST00000614051 FAM177BA6PVY3 158 aa19.56■□□□□ 0.72
CCL3-206ENST00000614051 TRIM28Q13263 835 aaKnown RBP19.56■□□□□ 0.72
CCL3-206ENST00000614051 RTL5Q5HYW3 569 aaPredicted RBP19.56■□□□□ 0.72
CCL3-206ENST00000614051 SAMD1Q6SPF0 538 aaPredicted RBP19.56■□□□□ 0.72
CCL3-206ENST00000614051 CCDC191Q8NCU4 936 aa19.56■□□□□ 0.72
CCL3-206ENST00000614051 FLAD1Q8NFF5 587 aa19.56■□□□□ 0.72
CCL3-206ENST00000614051 SPON1Q9HCB6 807 aa19.56■□□□□ 0.72
CCL3-206ENST00000614051 GRM8O00222 908 aa19.55■□□□□ 0.72
CCL3-206ENST00000614051 PDGFDQ9GZP0 370 aaPredicted RBP19.55■□□□□ 0.72
CCL3-206ENST00000614051 UBTFL1P0CB47 393 aaPredicted RBP19.54■□□□□ 0.72
CCL3-206ENST00000614051 SUSD4Q5VX71 490 aa19.54■□□□□ 0.72
CCL3-206ENST00000614051 UBE3BQ7Z3V4 1068 aa19.54■□□□□ 0.72
CCL3-206ENST00000614051 SYNE4Q8N205 404 aa19.54■□□□□ 0.72
CCL3-206ENST00000614051 COL24A1Q17RW2 1714 aa19.54■□□□□ 0.72
CCL3-206ENST00000614051 RGL2O15211 777 aa19.54■□□□□ 0.72
CCL3-206ENST00000614051 GNAI3P08754 354 aa19.54■□□□□ 0.72
CCL3-206ENST00000614051 PCDHB15Q9Y5E8 787 aa19.54■□□□□ 0.72
CCL3-206ENST00000614051 UTYO14607 1347 aa19.53■□□□□ 0.72
CCL3-206ENST00000614051 H7C1W4 665 aa19.53■□□□□ 0.72
CCL3-206ENST00000614051 CASP7P55210 303 aa19.53■□□□□ 0.72
CCL3-206ENST00000614051 NFIXQ14938 502 aa19.53■□□□□ 0.72
CCL3-206ENST00000614051 ERICH6BQ5W0A0 696 aa19.53■□□□□ 0.72
CCL3-206ENST00000614051 LRRFIP2Q9Y608 721 aaKnown RBP19.53■□□□□ 0.72
CCL3-206ENST00000614051 IBTKQ9P2D0 1353 aaPredicted RBP19.53■□□□□ 0.72
CCL3-206ENST00000614051 MSL1Q68DK7 614 aa19.52■□□□□ 0.72
CCL3-206ENST00000614051 FAM89AQ96GI7 184 aa19.52■□□□□ 0.72
CCL3-206ENST00000614051 SUCLG2Q96I99 432 aa19.52■□□□□ 0.72
CCL3-206ENST00000614051 SETDB2Q96T68 719 aa19.52■□□□□ 0.72
CCL3-206ENST00000614051 CHMP4BQ9H444 224 aaKnown RBP19.52■□□□□ 0.72
CCL3-206ENST00000614051 TRMT112Q9UI30 125 aaKnown RBP19.52■□□□□ 0.72
CCL3-206ENST00000614051 GNAI2P04899 355 aa19.51■□□□□ 0.71
CCL3-206ENST00000614051 PARP10Q53GL7 1025 aa19.51■□□□□ 0.71
CCL3-206ENST00000614051 PPP1R1BQ9UD71 204 aaPredicted RBP19.51■□□□□ 0.71
CCL3-206ENST00000614051 NTSR2O95665 410 aa19.5■□□□□ 0.71
CCL3-206ENST00000614051 PCCAP05165 728 aaPredicted RBP19.5■□□□□ 0.71
CCL3-206ENST00000614051 ZBTB38Q8NAP3 1195 aaPredicted RBP19.5■□□□□ 0.71
CCL3-206ENST00000614051 KAZALD1Q96I82 304 aa19.5■□□□□ 0.71
CCL3-206ENST00000614051 UTP14AQ9BVJ6 771 aaKnown RBP19.5■□□□□ 0.71
CCL3-206ENST00000614051 TM4SF1P30408 202 aa19.49■□□□□ 0.71
CCL3-206ENST00000614051 EPHA10Q5JZY3 1008 aa19.49■□□□□ 0.71
CCL3-206ENST00000614051 NUTM1Q86Y26 1132 aa19.49■□□□□ 0.71
CCL3-206ENST00000614051 PPP4R2Q9NY27 417 aa19.49■□□□□ 0.71
CCL3-206ENST00000614051 DDX60Q8IY21 1712 aaKnown RBP19.49■□□□□ 0.71
CCL3-206ENST00000614051 AAMPQ13685 434 aa19.48■□□□□ 0.71
CCL3-206ENST00000614051 PPP1R42Q7Z4L9 355 aa19.48■□□□□ 0.71
CCL3-206ENST00000614051 DDR1Q08345 913 aa19.48■□□□□ 0.71
CCL3-206ENST00000614051 B4GALNT3Q6L9W6 998 aa19.48■□□□□ 0.71
CCL3-206ENST00000614051 CCDC24Q8N4L8 307 aa19.48■□□□□ 0.71
CCL3-206ENST00000614051 BICC1Q9H694 974 aaKnown RBP19.48■□□□□ 0.71
CCL3-206ENST00000614051 CASZ1Q86V15 1759 aa19.47■□□□□ 0.71
CCL3-206ENST00000614051 CARMIL3Q8ND23 1372 aa19.47■□□□□ 0.71
CCL3-206ENST00000614051 ERFEQ4G0M1 354 aa19.47■□□□□ 0.71
CCL3-206ENST00000614051 CEP85Q6P2H3 762 aa19.47■□□□□ 0.71
CCL3-206ENST00000614051 NBPF5PQ86XG9 351 aaPredicted RBP19.47■□□□□ 0.71
CCL3-206ENST00000614051 SIRT2Q8IXJ6 389 aa19.47■□□□□ 0.71
CCL3-206ENST00000614051 NLGN1Q8N2Q7 840 aa19.47■□□□□ 0.71
CCL3-206ENST00000614051 MYH3P11055 1940 aa19.46■□□□□ 0.71
CCL3-206ENST00000614051 LAMB2P55268 1798 aa19.46■□□□□ 0.71
CCL3-206ENST00000614051 IRS4O14654 1257 aaPredicted RBP19.46■□□□□ 0.71
CCL3-206ENST00000614051 HCLS1P14317 486 aaPredicted RBP19.46■□□□□ 0.71
CCL3-206ENST00000614051 ANKRD44Q8N8A2 993 aa19.46■□□□□ 0.71
CCL3-206ENST00000614051 SH3TC1Q8TE82 1336 aa19.46■□□□□ 0.71
CCL3-206ENST00000614051 CDHR2Q9BYE9 1310 aa19.46■□□□□ 0.71
CCL3-206ENST00000614051 POLRMTO00411 1230 aaKnown RBP19.45■□□□□ 0.7
CCL3-206ENST00000614051 FOXO4P98177 505 aa19.45■□□□□ 0.7
CCL3-206ENST00000614051 SERPINB2P05120 415 aa19.44■□□□□ 0.7
CCL3-206ENST00000614051 MMP10P09238 476 aa19.44■□□□□ 0.7
CCL3-206ENST00000614051 CCDC136Q96JN2 1154 aa19.44■□□□□ 0.7
CCL3-206ENST00000614051 NYXQ9GZU5 481 aa19.44■□□□□ 0.7
CCL3-206ENST00000614051 ABCC12Q96J65 1359 aa19.44■□□□□ 0.7
CCL3-206ENST00000614051 PNMA6EA0A0J9YXQ4 647 aa19.43■□□□□ 0.7
CCL3-206ENST00000614051 IGHDP01880 384 aa19.43■□□□□ 0.7
CCL3-206ENST00000614051 GTF2E1P29083 439 aaPredicted RBP19.43■□□□□ 0.7
CCL3-206ENST00000614051 ATP8B2P98198 1209 aa19.42■□□□□ 0.7
CCL3-206ENST00000614051 TPTE2Q6XPS3 522 aa19.42■□□□□ 0.7
CCL3-206ENST00000614051 RPAP2Q8IXW5 612 aaPredicted RBP19.42■□□□□ 0.7
CCL3-206ENST00000614051 HDAC5Q9UQL6 1122 aa19.42■□□□□ 0.7
CCL3-206ENST00000614051 NRXN2Q9P2S2 1712 aa19.42■□□□□ 0.7
CCL3-206ENST00000614051 NPHP1O15259 732 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms