RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 ZCRB1Q8TBF4 217 aaKnown RBP23.88■■□□□ 1.41
SMARCD2-212ENST00000613943 WDR17Q8IZU2 1322 aa23.88■■□□□ 1.41
SMARCD2-212ENST00000613943 NMIQ13287 307 aaPredicted RBP23.88■■□□□ 1.41
SMARCD2-212ENST00000613943 TTLL7Q6ZT98 887 aa23.88■■□□□ 1.41
SMARCD2-212ENST00000613943 A1BGP04217 495 aa23.87■■□□□ 1.41
SMARCD2-212ENST00000613943 TTC14Q96N46 770 aa23.87■■□□□ 1.41
SMARCD2-212ENST00000613943 BRD1O95696 1058 aa23.87■■□□□ 1.41
SMARCD2-212ENST00000613943 CHGBP05060 677 aa23.87■■□□□ 1.41
SMARCD2-212ENST00000613943 RUFY3Q7L099 469 aa23.87■■□□□ 1.41
SMARCD2-212ENST00000613943 SLAIN2Q9P270 581 aa23.87■■□□□ 1.41
SMARCD2-212ENST00000613943 A0A0D9SFI3 127 aa23.86■■□□□ 1.41
SMARCD2-212ENST00000613943 PTPN12Q05209 780 aaKnown RBP23.86■■□□□ 1.41
SMARCD2-212ENST00000613943 TFCP2Q12800 502 aa23.86■■□□□ 1.41
SMARCD2-212ENST00000613943 XIRP1Q702N8 1843 aaKnown RBP23.86■■□□□ 1.41
SMARCD2-212ENST00000613943 LARGE1O95461 756 aa23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 RFX5P48382 616 aaPredicted RBP23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 RUFY2Q8WXA3 655 aa23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 CHMP3Q9Y3E7 222 aa23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 PKD1L3Q7Z443 1732 aa23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 INTS4Q96HW7 963 aaKnown RBP23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 JAKMIP1Q96N16 626 aaKnown RBP23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 FSD1Q9BTV5 496 aa23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 GDPD2Q9HCC8 539 aa23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 RRAGDQ9NQL2 400 aaPredicted RBP23.85■■□□□ 1.41
SMARCD2-212ENST00000613943 EPB41L2O43491 1005 aaKnown RBP23.84■■□□□ 1.41
SMARCD2-212ENST00000613943 PCDH11XQ9BZA7 1347 aa23.84■■□□□ 1.41
SMARCD2-212ENST00000613943 PCDH11YQ9BZA8 1340 aa23.84■■□□□ 1.41
SMARCD2-212ENST00000613943 ZBTB3Q9H5J0 574 aa23.84■■□□□ 1.41
SMARCD2-212ENST00000613943 DBNLQ9UJU6 430 aaKnown RBP23.84■■□□□ 1.41
SMARCD2-212ENST00000613943 GLI3P10071 1580 aa23.83■■□□□ 1.41
SMARCD2-212ENST00000613943 ZSCAN23Q3MJ62 389 aa23.83■■□□□ 1.4
SMARCD2-212ENST00000613943 PLBD2Q8NHP8 589 aa23.83■■□□□ 1.4
SMARCD2-212ENST00000613943 DNAJC5Q9H3Z4 198 aa23.83■■□□□ 1.4
SMARCD2-212ENST00000613943 CCDC171Q6TFL3 1326 aa23.83■■□□□ 1.4
SMARCD2-212ENST00000613943 LMBR1LQ6UX01 489 aa23.82■■□□□ 1.4
SMARCD2-212ENST00000613943 RBM8AQ9Y5S9 174 aaKnown RBP23.82■■□□□ 1.4
SMARCD2-212ENST00000613943 TAF6LQ9Y6J9 622 aa23.82■■□□□ 1.4
SMARCD2-212ENST00000613943 COL5A2P05997 1499 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-212ENST00000613943 KCNJ4P48050 445 aa23.82■■□□□ 1.4
SMARCD2-212ENST00000613943 ZNF589Q86UQ0 364 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-212ENST00000613943 ZNF330Q9Y3S2 320 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-212ENST00000613943 SOS2Q07890 1332 aaPredicted RBP23.81■■□□□ 1.4
SMARCD2-212ENST00000613943 CASP7P55210 303 aa23.81■■□□□ 1.4
SMARCD2-212ENST00000613943 FAM43AQ8N2R8 423 aa23.81■■□□□ 1.4
SMARCD2-212ENST00000613943 COPRSQ9NQ92 184 aa23.81■■□□□ 1.4
SMARCD2-212ENST00000613943 TPRNQ4KMQ1 711 aa23.81■■□□□ 1.4
SMARCD2-212ENST00000613943 TNNI3KQ59H18 835 aa23.81■■□□□ 1.4
SMARCD2-212ENST00000613943 FPGT-TNNI3KV9GXZ4 949 aa23.81■■□□□ 1.4
SMARCD2-212ENST00000613943 ABCC6O95255 1503 aa23.8■■□□□ 1.4
SMARCD2-212ENST00000613943 IL2RBP14784 551 aa23.8■■□□□ 1.4
SMARCD2-212ENST00000613943 NECTIN1Q15223 517 aa23.8■■□□□ 1.4
SMARCD2-212ENST00000613943 TCEANC2Q96MN5 208 aa23.8■■□□□ 1.4
SMARCD2-212ENST00000613943 RABL6Q3YEC7 729 aaPredicted RBP23.79■■□□□ 1.4
SMARCD2-212ENST00000613943 DBNDD2Q9BQY9 259 aa23.79■■□□□ 1.4
SMARCD2-212ENST00000613943 RPAP1Q9BWH6 1393 aaPredicted RBP23.79■■□□□ 1.4
SMARCD2-212ENST00000613943 CREB3L3Q68CJ9 461 aa23.79■■□□□ 1.4
SMARCD2-212ENST00000613943 TMEM63CQ9P1W3 806 aa23.79■■□□□ 1.4
SMARCD2-212ENST00000613943 LIMCH1Q9UPQ0 1083 aa23.79■■□□□ 1.4
SMARCD2-212ENST00000613943 EVA1CP58658 441 aa23.78■■□□□ 1.4
SMARCD2-212ENST00000613943 CCDC83Q8IWF9 413 aa23.78■■□□□ 1.4
SMARCD2-212ENST00000613943 DNAJC2Q99543 621 aaKnown RBP23.78■■□□□ 1.4
SMARCD2-212ENST00000613943 ISY1Q9ULR0 285 aaKnown RBP23.78■■□□□ 1.4
SMARCD2-212ENST00000613943 ARFGEF2Q9Y6D5 1785 aa23.78■■□□□ 1.4
SMARCD2-212ENST00000613943 PDRG1Q9NUG6 133 aa23.78■■□□□ 1.4
SMARCD2-212ENST00000613943 AFDNP55196 1824 aaKnown RBP23.78■■□□□ 1.4
SMARCD2-212ENST00000613943 FOXO4P98177 505 aa23.76■■□□□ 1.39
SMARCD2-212ENST00000613943 MAP4K1Q92918 833 aa23.76■■□□□ 1.39
SMARCD2-212ENST00000613943 ZNF594Q96JF6 807 aaPredicted RBP23.76■■□□□ 1.39
SMARCD2-212ENST00000613943 SLC27A2O14975 620 aa23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 PRIM1P49642 420 aaKnown RBP23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 SLFNL1Q499Z3 407 aa23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 CCDC129Q6ZRS4 1044 aa23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 NECAB1Q8N987 351 aa23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 SEC62Q99442 399 aaKnown RBP23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 ZSWIM6Q9HCJ5 1215 aa23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 ERVV-2B6SEH9 535 aa23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 GADD45BO75293 160 aaPredicted RBP23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 NASPP49321 788 aaPredicted RBP23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 ST3GAL1Q11201 340 aa23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 DDX46Q7L014 1031 aaKnown RBP23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 CARD10Q9BWT7 1032 aa23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 CYP46A1Q9Y6A2 500 aa23.75■■□□□ 1.39
SMARCD2-212ENST00000613943 SYCE3A1L190 88 aa23.74■■□□□ 1.39
SMARCD2-212ENST00000613943 COL15A1P39059 1388 aa23.74■■□□□ 1.39
SMARCD2-212ENST00000613943 ZKSCAN1P17029 563 aaPredicted RBP23.73■■□□□ 1.39
SMARCD2-212ENST00000613943 ZNF445P59923 1031 aa23.73■■□□□ 1.39
SMARCD2-212ENST00000613943 CWC25Q9NXE8 425 aaPredicted RBP23.73■■□□□ 1.39
SMARCD2-212ENST00000613943 KCPQ6ZWJ8 1503 aa23.73■■□□□ 1.39
SMARCD2-212ENST00000613943 H7C1W4 665 aa23.73■■□□□ 1.39
SMARCD2-212ENST00000613943 ME3Q16798 604 aa23.73■■□□□ 1.39
SMARCD2-212ENST00000613943 WDR33Q9C0J8 1336 aaKnown RBP23.73■■□□□ 1.39
SMARCD2-212ENST00000613943 HIP1O00291 1037 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 SYT1P21579 422 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 VPS53Q5VIR6 699 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 KCNB2Q92953 911 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 NEUROD6Q96NK8 337 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 CCDC85AQ96PX6 553 aaPredicted RBP23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 SMC3Q9UQE7 1217 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 ATP5JP18859 108 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 TIMM10P62072 90 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms