RNA–Protein interactions for RNA: ENST00000613707.1

GAPDHP41-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 41, humanhuman

BASIC

Gene GAPDHP41, Length 975 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP41-201ENST00000613707 RIPOR1Q6ZS17 1223 aa10.66□□□□□ -0.7
GAPDHP41-201ENST00000613707 SIX5Q8N196 739 aa10.66□□□□□ -0.7
GAPDHP41-201ENST00000613707 TCOF1Q13428 1488 aaKnown RBP10.66□□□□□ -0.7
GAPDHP41-201ENST00000613707 KANK4Q5T7N3 995 aaPredicted RBP10.65□□□□□ -0.7
GAPDHP41-201ENST00000613707 ERICH6Q7L0X2 663 aa10.65□□□□□ -0.7
GAPDHP41-201ENST00000613707 NCOA2Q15596 1464 aa10.65□□□□□ -0.7
GAPDHP41-201ENST00000613707 DNMT1P26358 1616 aaKnown RBP10.65□□□□□ -0.7
GAPDHP41-201ENST00000613707 ZNF335Q9H4Z2 1342 aaPredicted RBP10.64□□□□□ -0.71
GAPDHP41-201ENST00000613707 CAMSAP2Q08AD1 1489 aa10.64□□□□□ -0.71
GAPDHP41-201ENST00000613707 VSIG8P0DPA2 414 aa10.64□□□□□ -0.71
GAPDHP41-201ENST00000613707 PLA2G4AP47712 749 aa10.64□□□□□ -0.71
GAPDHP41-201ENST00000613707 MTFR1Q15390 333 aa10.64□□□□□ -0.71
GAPDHP41-201ENST00000613707 NIFKQ9BYG3 293 aaKnown RBP10.64□□□□□ -0.71
GAPDHP41-201ENST00000613707 CCDC141Q6ZP82 1450 aa10.63□□□□□ -0.71
GAPDHP41-201ENST00000613707 SFI1A8K8P3 1242 aa10.63□□□□□ -0.71
GAPDHP41-201ENST00000613707 CDK2AP1O14519 115 aa10.63□□□□□ -0.71
GAPDHP41-201ENST00000613707 CRTC2Q53ET0 693 aaPredicted RBP10.63□□□□□ -0.71
GAPDHP41-201ENST00000613707 ILDR2Q71H61 639 aa10.63□□□□□ -0.71
GAPDHP41-201ENST00000613707 VWA5B2Q8N398 1253 aa10.63□□□□□ -0.71
GAPDHP41-201ENST00000613707 SERPINA10Q9UK55 444 aa10.63□□□□□ -0.71
GAPDHP41-201ENST00000613707 A2ML1A8K2U0 1454 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 A0A1B0GTH6 734 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L13C9JLJ4 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L11C9JVI0 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L21D6R901 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L18D6R9N7 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L22D6RA61 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L17D6RBQ6 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L19D6RCP7 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L20D6RJB6 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 F11P03951 625 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 GMPRP36959 345 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP17L24Q0WX57 530 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 CDCA8Q53HL2 280 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 SV2AQ7L0J3 742 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 TNS4Q8IZW8 715 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 NANOS1Q8WY41 292 aaKnown RBP10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 GPAMQ9HCL2 828 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 CUEDC1Q9NWM3 386 aaPredicted RBP10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 CABP1Q9NZU7 370 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 SCHIP1Q9P0W5 487 aaPredicted RBP10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 USP3Q9Y6I4 520 aa10.62□□□□□ -0.71
GAPDHP41-201ENST00000613707 ARHGEF5Q12774 1597 aa10.61□□□□□ -0.71
GAPDHP41-201ENST00000613707 FAM196BA6NMK8 535 aa10.61□□□□□ -0.71
GAPDHP41-201ENST00000613707 KIF3BO15066 747 aa10.61□□□□□ -0.71
GAPDHP41-201ENST00000613707 SEC13P55735 322 aa10.61□□□□□ -0.71
GAPDHP41-201ENST00000613707 PTK7Q13308 1070 aa10.61□□□□□ -0.71
GAPDHP41-201ENST00000613707 IQSEC3Q9UPP2 1182 aaPredicted RBP10.61□□□□□ -0.71
GAPDHP41-201ENST00000613707 DISP3Q9P2K9 1392 aa10.61□□□□□ -0.71
GAPDHP41-201ENST00000613707 KDM5DQ9BY66 1539 aa10.6□□□□□ -0.71
GAPDHP41-201ENST00000613707 DPYDQ12882 1025 aa10.6□□□□□ -0.71
GAPDHP41-201ENST00000613707 TRIM22Q8IYM9 498 aa10.6□□□□□ -0.71
GAPDHP41-201ENST00000613707 AIDAQ96BJ3 306 aa10.6□□□□□ -0.71
GAPDHP41-201ENST00000613707 POLR1AO95602 1720 aaPredicted RBP10.6□□□□□ -0.71
GAPDHP41-201ENST00000613707 PZPP20742 1482 aa10.6□□□□□ -0.71
GAPDHP41-201ENST00000613707 NEURL4Q96JN8 1562 aa10.6□□□□□ -0.71
GAPDHP41-201ENST00000613707 FAM135AQ9P2D6 1515 aa10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 H7C1W4 665 aa10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 M0R2N6 131 aa10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 DKK1O94907 266 aa10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 EPHA4P54764 986 aa10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 TBCELQ5QJ74 424 aa10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 ANKMY2Q8IV38 441 aa10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 SLC9A9Q8IVB4 645 aa10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 TSEN2Q8NCE0 465 aaKnown RBP10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 ZNF837Q96EG3 531 aaPredicted RBP10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 LRRC9Q6ZRR7 1453 aa10.59□□□□□ -0.71
GAPDHP41-201ENST00000613707 SPATA31D1Q6ZQQ2 1576 aa10.58□□□□□ -0.72
GAPDHP41-201ENST00000613707 TNRQ92752 1358 aa10.58□□□□□ -0.72
GAPDHP41-201ENST00000613707 MSX1P28360 303 aa10.58□□□□□ -0.72
GAPDHP41-201ENST00000613707 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
GAPDHP41-201ENST00000613707 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
GAPDHP41-201ENST00000613707 GMCL1Q96IK5 515 aa10.58□□□□□ -0.72
GAPDHP41-201ENST00000613707 VPS8Q8N3P4 1428 aa10.58□□□□□ -0.72
GAPDHP41-201ENST00000613707 WASHC2CQ9Y4E1 1318 aa10.58□□□□□ -0.72
GAPDHP41-201ENST00000613707 MAST1Q9Y2H9 1570 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 LOC105371045A0A1W2PR82 267 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 WIPF1O43516 503 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 CSB-PGBD3P0DP91 1061 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 FOXK2Q01167 660 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 DBN1Q16643 649 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 ZNF295-AS1Q8N0V1 137 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 PGBD3Q8N328 593 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 CCDC82Q8N4S0 544 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 NUCKS1Q9H1E3 243 aaKnown RBP10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 RUBCNLQ9H714 662 aa10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 RNF17Q9BXT8 1623 aaKnown RBP10.57□□□□□ -0.72
GAPDHP41-201ENST00000613707 FOXR1Q6PIV2 292 aa10.56□□□□□ -0.72
GAPDHP41-201ENST00000613707 TSPAN10Q9H1Z9 355 aaPredicted RBP10.56□□□□□ -0.72
GAPDHP41-201ENST00000613707 PARP3Q9Y6F1 533 aa10.56□□□□□ -0.72
GAPDHP41-201ENST00000613707 MIA2Q96PC5 1412 aa10.56□□□□□ -0.72
GAPDHP41-201ENST00000613707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.55□□□□□ -0.72
GAPDHP41-201ENST00000613707 UBAP1LF5GYI3 381 aa10.55□□□□□ -0.72
GAPDHP41-201ENST00000613707 TSPY4P0CV99 314 aa10.55□□□□□ -0.72
GAPDHP41-201ENST00000613707 TSPY10P0CW01 314 aa10.55□□□□□ -0.72
GAPDHP41-201ENST00000613707 GTPBP3Q969Y2 492 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms