RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 DNAAF4Q8WXU2 420 aa21.19■□□□□ 0.98
IRF1-211ENST00000613424 SMC4Q9NTJ3 1288 aa21.19■□□□□ 0.98
IRF1-211ENST00000613424 TRMT112Q9UI30 125 aaKnown RBP21.19■□□□□ 0.98
IRF1-211ENST00000613424 GOLGB1Q14789 3259 aaKnown RBP21.18■□□□□ 0.98
IRF1-211ENST00000613424 ANKRD31Q8N7Z5 1873 aa21.18■□□□□ 0.98
IRF1-211ENST00000613424 F6X3S4 739 aa21.18■□□□□ 0.98
IRF1-211ENST00000613424 H0YIN7 160 aa21.18■□□□□ 0.98
IRF1-211ENST00000613424 IGKV5-2P06315 115 aa21.18■□□□□ 0.98
IRF1-211ENST00000613424 NEXNQ0ZGT2 675 aa21.18■□□□□ 0.98
IRF1-211ENST00000613424 C2CD5Q86YS7 1000 aa21.18■□□□□ 0.98
IRF1-211ENST00000613424 CCDC191Q8NCU4 936 aa21.18■□□□□ 0.98
IRF1-211ENST00000613424 WWC3Q9ULE0 1092 aa21.18■□□□□ 0.98
IRF1-211ENST00000613424 SYNE4Q8N205 404 aa21.17■□□□□ 0.98
IRF1-211ENST00000613424 PDZRN3Q9UPQ7 1066 aa21.17■□□□□ 0.98
IRF1-211ENST00000613424 ABCC12Q96J65 1359 aa21.16■□□□□ 0.98
IRF1-211ENST00000613424 RNF123Q5XPI4 1314 aa21.16■□□□□ 0.98
IRF1-211ENST00000613424 KLRG2A4D1S0 409 aaPredicted RBP21.16■□□□□ 0.98
IRF1-211ENST00000613424 BRPF1P55201 1214 aaPredicted RBP21.16■□□□□ 0.98
IRF1-211ENST00000613424 SLC10A5Q5PT55 438 aa21.16■□□□□ 0.98
IRF1-211ENST00000613424 PELP1Q8IZL8 1130 aaKnown RBP21.16■□□□□ 0.98
IRF1-211ENST00000613424 FAM89AQ96GI7 184 aa21.16■□□□□ 0.98
IRF1-211ENST00000613424 YTHDC1Q96MU7 727 aaKnown RBP21.16■□□□□ 0.98
IRF1-211ENST00000613424 CWC25Q9NXE8 425 aaPredicted RBP21.16■□□□□ 0.98
IRF1-211ENST00000613424 PIM2Q9P1W9 311 aa21.16■□□□□ 0.98
IRF1-211ENST00000613424 PTPRCP08575 1304 aa21.15■□□□□ 0.98
IRF1-211ENST00000613424 SH3TC1Q8TE82 1336 aa21.15■□□□□ 0.98
IRF1-211ENST00000613424 GPR162Q16538 588 aa21.15■□□□□ 0.98
IRF1-211ENST00000613424 CWF19L2Q2TBE0 894 aaKnown RBP21.15■□□□□ 0.98
IRF1-211ENST00000613424 UTRNP46939 3433 aa21.14■□□□□ 0.98
IRF1-211ENST00000613424 DCAF8L1A6NGE4 600 aa21.14■□□□□ 0.97
IRF1-211ENST00000613424 NEURL1BA8MQ27 555 aa21.14■□□□□ 0.97
IRF1-211ENST00000613424 SRGNP10124 158 aa21.13■□□□□ 0.97
IRF1-211ENST00000613424 HCLS1P14317 486 aaPredicted RBP21.13■□□□□ 0.97
IRF1-211ENST00000613424 YBX3P16989 372 aaKnown RBP eCLIP21.13■□□□□ 0.97
IRF1-211ENST00000613424 RTL5Q5HYW3 569 aaPredicted RBP21.13■□□□□ 0.97
IRF1-211ENST00000613424 BEND3Q5T5X7 828 aa21.13■□□□□ 0.97
IRF1-211ENST00000613424 ZBTB38Q8NAP3 1195 aaPredicted RBP21.13■□□□□ 0.97
IRF1-211ENST00000613424 LINS1Q8NG48 757 aa21.13■□□□□ 0.97
IRF1-211ENST00000613424 ZNF622Q969S3 477 aaKnown RBP eCLIP21.13■□□□□ 0.977e-6■■□□□ 12.8
IRF1-211ENST00000613424 NOB1Q9ULX3 412 aaKnown RBP21.13■□□□□ 0.97
IRF1-211ENST00000613424 BCAR3O75815 825 aa21.12■□□□□ 0.97
IRF1-211ENST00000613424 PCCAP05165 728 aaPredicted RBP21.12■□□□□ 0.97
IRF1-211ENST00000613424 JARID2Q92833 1246 aaPredicted RBP21.12■□□□□ 0.97
IRF1-211ENST00000613424 MASTLQ96GX5 879 aa21.12■□□□□ 0.97
IRF1-211ENST00000613424 NLRP3Q96P20 1036 aa21.12■□□□□ 0.97
IRF1-211ENST00000613424 BCS1LQ9Y276 419 aa21.12■□□□□ 0.97
IRF1-211ENST00000613424 DALRD3Q5D0E6 543 aaKnown RBP21.11■□□□□ 0.97
IRF1-211ENST00000613424 SLC4A10Q6U841 1118 aa21.11■□□□□ 0.97
IRF1-211ENST00000613424 C3orf67Q6ZVT6 689 aa21.11■□□□□ 0.97
IRF1-211ENST00000613424 RIC1Q4ADV7 1423 aa21.11■□□□□ 0.97
IRF1-211ENST00000613424 BRCA1P38398 1863 aaKnown RBP21.1■□□□□ 0.97
IRF1-211ENST00000613424 IRS4O14654 1257 aaPredicted RBP21.1■□□□□ 0.97
IRF1-211ENST00000613424 NPR1P16066 1061 aa21.1■□□□□ 0.97
IRF1-211ENST00000613424 GCKRQ14397 625 aa21.1■□□□□ 0.97
IRF1-211ENST00000613424 CRY2Q49AN0 593 aa21.1■□□□□ 0.97
IRF1-211ENST00000613424 STYK1Q6J9G0 422 aa21.1■□□□□ 0.97
IRF1-211ENST00000613424 TTLL6Q8N841 843 aa21.1■□□□□ 0.97
IRF1-211ENST00000613424 TNRC6CQ9HCJ0 1690 aaKnown RBP21.09■□□□□ 0.97
IRF1-211ENST00000613424 COL11A2P13942 1736 aaPredicted RBP21.09■□□□□ 0.97
IRF1-211ENST00000613424 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.97
IRF1-211ENST00000613424 H7C1W4 665 aa21.08■□□□□ 0.97
IRF1-211ENST00000613424 CNKSR1Q969H4 720 aa21.08■□□□□ 0.97
IRF1-211ENST00000613424 KIF16BQ96L93 1317 aa21.07■□□□□ 0.96
IRF1-211ENST00000613424 GRIN3BO60391 1043 aa21.07■□□□□ 0.96
IRF1-211ENST00000613424 ARHGAP45Q92619 1136 aa21.07■□□□□ 0.96
IRF1-211ENST00000613424 SRCIN1Q9C0H9 1055 aa21.07■□□□□ 0.96
IRF1-211ENST00000613424 ALDH1L1O75891 902 aa21.06■□□□□ 0.96
IRF1-211ENST00000613424 ALDH1B1P30837 517 aa21.06■□□□□ 0.96
IRF1-211ENST00000613424 HOXA10P31260 410 aaPredicted RBP21.06■□□□□ 0.96
IRF1-211ENST00000613424 RPGRQ92834 1020 aaKnown RBP21.06■□□□□ 0.96
IRF1-211ENST00000613424 API5Q9BZZ5 524 aaKnown RBP21.06■□□□□ 0.96
IRF1-211ENST00000613424 CDHR2Q9BYE9 1310 aa21.05■□□□□ 0.96
IRF1-211ENST00000613424 DDX60Q8IY21 1712 aaKnown RBP21.05■□□□□ 0.96
IRF1-211ENST00000613424 IPO8O15397 1037 aaKnown RBP21.05■□□□□ 0.96
IRF1-211ENST00000613424 HSP90B1P14625 803 aaKnown RBP21.05■□□□□ 0.96
IRF1-211ENST00000613424 UBE3BQ7Z3V4 1068 aa21.05■□□□□ 0.96
IRF1-211ENST00000613424 FRAT1Q92837 279 aaPredicted RBP21.05■□□□□ 0.96
IRF1-211ENST00000613424 RBM17Q96I25 401 aaKnown RBP21.05■□□□□ 0.96
IRF1-211ENST00000613424 PDE8AO60658 829 aa21.04■□□□□ 0.96
IRF1-211ENST00000613424 CASP7P55210 303 aa21.04■□□□□ 0.96
IRF1-211ENST00000613424 SF3B3Q15393 1217 aaKnown RBP21.04■□□□□ 0.96
IRF1-211ENST00000613424 PRPF40BQ6NWY9 871 aaKnown RBP21.04■□□□□ 0.96
IRF1-211ENST00000613424 CRAMP1Q96RY5 1269 aa21.04■□□□□ 0.96
IRF1-211ENST00000613424 LAMB2P55268 1798 aa21.02■□□□□ 0.96
IRF1-211ENST00000613424 SLX4Q8IY92 1834 aa21.02■□□□□ 0.96
IRF1-211ENST00000613424 GRM8O00222 908 aa21.02■□□□□ 0.96
IRF1-211ENST00000613424 ATF7IPQ6VMQ6 1270 aa21.02■□□□□ 0.96
IRF1-211ENST00000613424 C9orf78Q9NZ63 289 aaPredicted RBP21.02■□□□□ 0.96
IRF1-211ENST00000613424 ZNF219Q9P2Y4 722 aaPredicted RBP21.02■□□□□ 0.96
IRF1-211ENST00000613424 ARFGEF1Q9Y6D6 1849 aa21.01■□□□□ 0.95
IRF1-211ENST00000613424 C21orf2O43822 256 aa21.01■□□□□ 0.95
IRF1-211ENST00000613424 TRIM27P14373 513 aa21.01■□□□□ 0.95
IRF1-211ENST00000613424 ARHGAP27Q6ZUM4 889 aa21.01■□□□□ 0.95
IRF1-211ENST00000613424 DDX46Q7L014 1031 aaKnown RBP21.01■□□□□ 0.95
IRF1-211ENST00000613424 RCAN3Q9UKA8 241 aa21.01■□□□□ 0.95
IRF1-211ENST00000613424 CCT4P50991 539 aaKnown RBP21■□□□□ 0.95
IRF1-211ENST00000613424 ZKSCAN2Q63HK3 967 aa21■□□□□ 0.95
IRF1-211ENST00000613424 C7orf43Q8WVR3 580 aa21■□□□□ 0.95
IRF1-211ENST00000613424 PLA2G12BQ9BX93 195 aa21■□□□□ 0.95
IRF1-211ENST00000613424 TNNQ9UQP3 1299 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms