RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 OS9Q13438 667 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA4-202ENST00000612927 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
PCDHGA4-202ENST00000612927 HSP90AB4PQ58FF6 505 aa15.23■□□□□ 0.03
PCDHGA4-202ENST00000612927 MYD88Q99836 296 aa15.23■□□□□ 0.03
PCDHGA4-202ENST00000612927 IL2RBP14784 551 aa15.23■□□□□ 0.03
PCDHGA4-202ENST00000612927 METTL22Q9BUU2 404 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA4-202ENST00000612927 CCDC94Q9BW85 323 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA4-202ENST00000612927 BICC1Q9H694 974 aaKnown RBP15.23■□□□□ 0.03
PCDHGA4-202ENST00000612927 UPF3BQ9BZI7 483 aaKnown RBP15.22■□□□□ 0.03
PCDHGA4-202ENST00000612927 CWC22Q9HCG8 908 aaKnown RBP15.22■□□□□ 0.03
PCDHGA4-202ENST00000612927 SHANK3Q9BYB0 1731 aa15.22■□□□□ 0.03
PCDHGA4-202ENST00000612927 MCCP23508 829 aa15.22■□□□□ 0.03
PCDHGA4-202ENST00000612927 HDAC5Q9UQL6 1122 aa15.22■□□□□ 0.03
PCDHGA4-202ENST00000612927 LAMB4A4D0S4 1761 aa15.22■□□□□ 0.03
PCDHGA4-202ENST00000612927 PRIM1P49642 420 aaKnown RBP15.21■□□□□ 0.03
PCDHGA4-202ENST00000612927 NEXNQ0ZGT2 675 aa15.21■□□□□ 0.03
PCDHGA4-202ENST00000612927 ANKRD13DQ6ZTN6 518 aa15.21■□□□□ 0.03
PCDHGA4-202ENST00000612927 TMX3Q96JJ7 454 aa15.21■□□□□ 0.03
PCDHGA4-202ENST00000612927 CHAMP1Q96JM3 812 aa15.21■□□□□ 0.03
PCDHGA4-202ENST00000612927 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.03
PCDHGA4-202ENST00000612927 GCKRQ14397 625 aa15.21■□□□□ 0.03
PCDHGA4-202ENST00000612927 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
PCDHGA4-202ENST00000612927 DDX54Q8TDD1 881 aaKnown RBP15.21■□□□□ 0.03
PCDHGA4-202ENST00000612927 EVA1CP58658 441 aa15.2■□□□□ 0.02
PCDHGA4-202ENST00000612927 DMTNQ08495 405 aa15.2■□□□□ 0.02
PCDHGA4-202ENST00000612927 ZDHHC9Q9Y397 364 aa15.2■□□□□ 0.02
PCDHGA4-202ENST00000612927 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
PCDHGA4-202ENST00000612927 NKX1-1Q15270 411 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA4-202ENST00000612927 FOXD4L5Q5VV16 416 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA4-202ENST00000612927 FOXD4L4Q8WXT5 416 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA4-202ENST00000612927 USP42Q9H9J4 1324 aaKnown RBP15.2■□□□□ 0.02
PCDHGA4-202ENST00000612927 KCPQ6ZWJ8 1503 aa15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 UBR2Q8IWV8 1755 aa15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 EPHA10Q5JZY3 1008 aa15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 PAPPAQ13219 1627 aa15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 NBPF26B4DH59 902 aa15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 NBPF14Q5TI25 921 aa15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 NBPF10Q6P3W6 841 aaKnown RBP15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 NBPF15Q8N660 670 aa15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 JARID2Q92833 1246 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA4-202ENST00000612927 ARFGEF2Q9Y6D5 1785 aa15.18■□□□□ 0.02
PCDHGA4-202ENST00000612927 ANAPC15P60006 121 aa15.18■□□□□ 0.02
PCDHGA4-202ENST00000612927 CNTROBQ8N137 903 aa15.18■□□□□ 0.02
PCDHGA4-202ENST00000612927 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
PCDHGA4-202ENST00000612927 SGSM2O43147 1006 aa15.18■□□□□ 0.02
PCDHGA4-202ENST00000612927 CWC27Q6UX04 472 aaKnown RBP15.18■□□□□ 0.02
PCDHGA4-202ENST00000612927 ERC1Q8IUD2 1116 aa15.18■□□□□ 0.02
PCDHGA4-202ENST00000612927 MYRIPQ8NFW9 859 aa15.18■□□□□ 0.02
PCDHGA4-202ENST00000612927 SASH1O94885 1247 aa15.17■□□□□ 0.02
PCDHGA4-202ENST00000612927 GPT2Q8TD30 523 aa15.17■□□□□ 0.02
PCDHGA4-202ENST00000612927 TTC41PQ6P2S7 1318 aa15.17■□□□□ 0.02
PCDHGA4-202ENST00000612927 ATP5J2-PTCD1G3V325 749 aa15.17■□□□□ 0.02
PCDHGA4-202ENST00000612927 PTCD1O75127 700 aaKnown RBP15.17■□□□□ 0.02
PCDHGA4-202ENST00000612927 KIAA2012Q0VF49 1180 aa15.17■□□□□ 0.02
PCDHGA4-202ENST00000612927 KLHDC4Q8TBB5 520 aa15.17■□□□□ 0.02
PCDHGA4-202ENST00000612927 TOGARAM1Q9Y4F4 1720 aa15.17■□□□□ 0.02
PCDHGA4-202ENST00000612927 RAD50Q92878 1312 aa15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 HSPA4P34932 840 aa15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 PRIMPOLQ96LW4 560 aa15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 AFDNP55196 1824 aaKnown RBP15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 MBD3O95983 291 aa15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 AACSQ86V21 672 aa15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 PLBD2Q8NHP8 589 aa15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 SIL1Q9H173 461 aa15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 BTG4Q9NY30 223 aa15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 TNS2Q63HR2 1409 aa15.16■□□□□ 0.02
PCDHGA4-202ENST00000612927 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 A1BGP04217 495 aa15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 G3BP1Q13283 466 aaKnown RBP eCLIP15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 IFIT2P09913 472 aaKnown RBP15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 HMGN5P82970 282 aaKnown RBP15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 TTLL7Q6ZT98 887 aa15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 UBE3BQ7Z3V4 1068 aa15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 LSG1Q9H089 658 aaKnown RBP15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 ECHDC1Q9NTX5 307 aa15.15■□□□□ 0.02
PCDHGA4-202ENST00000612927 MCM2P49736 904 aa15.14■□□□□ 0.01
PCDHGA4-202ENST00000612927 RASEFQ8IZ41 740 aa15.14■□□□□ 0.01
PCDHGA4-202ENST00000612927 ZSCAN20P17040 1043 aaPredicted RBP15.14■□□□□ 0.01
PCDHGA4-202ENST00000612927 GTF2F1P35269 517 aaKnown RBP eCLIP15.14■□□□□ 0.01
PCDHGA4-202ENST00000612927 CUL4AQ13619 759 aa15.14■□□□□ 0.01
PCDHGA4-202ENST00000612927 EAF2Q96CJ1 260 aaPredicted RBP15.14■□□□□ 0.01
PCDHGA4-202ENST00000612927 GTPBP4Q9BZE4 634 aaKnown RBP15.14■□□□□ 0.01
PCDHGA4-202ENST00000612927 TLR7Q9NYK1 1049 aaKnown RBP15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 TMEM63CQ9P1W3 806 aa15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 SNX14Q9Y5W7 946 aa15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 A0A087WZG4 1122 aa15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 CASP7P55210 303 aa15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 LARP6Q9BRS8 491 aaKnown RBP15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 CCDC8Q9H0W5 538 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 DIAPH3Q9NSV4 1193 aa15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
PCDHGA4-202ENST00000612927 RFX5P48382 616 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA4-202ENST00000612927 GPATCH3Q96I76 525 aa15.12■□□□□ 0.01
PCDHGA4-202ENST00000612927 ROBO1Q9Y6N7 1651 aa15.12■□□□□ 0.01
PCDHGA4-202ENST00000612927 NUP188Q5SRE5 1749 aa15.12■□□□□ 0.01
PCDHGA4-202ENST00000612927 SYCE3A1L190 88 aa15.12■□□□□ 0.01
PCDHGA4-202ENST00000612927 COL15A1P39059 1388 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms