RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 ECE1P42892 770 aa18.48■□□□□ 0.55
LINC00116-203ENST00000611969 JDP2Q8WYK2 163 aa18.48■□□□□ 0.55
LINC00116-203ENST00000611969 LMOD1P29536 600 aaPredicted RBP18.47■□□□□ 0.55
LINC00116-203ENST00000611969 HLFQ16534 295 aa18.47■□□□□ 0.55
LINC00116-203ENST00000611969 PHACTR3Q96KR7 559 aa18.47■□□□□ 0.55
LINC00116-203ENST00000611969 BEGAINQ9BUH8 593 aa18.47■□□□□ 0.55
LINC00116-203ENST00000611969 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
LINC00116-203ENST00000611969 ALDH1B1P30837 517 aa18.46■□□□□ 0.55
LINC00116-203ENST00000611969 EIF6P56537 245 aaKnown RBP18.46■□□□□ 0.55
LINC00116-203ENST00000611969 CRY2Q49AN0 593 aa18.46■□□□□ 0.55
LINC00116-203ENST00000611969 TLL2Q9Y6L7 1015 aa18.46■□□□□ 0.55
LINC00116-203ENST00000611969 RIC1Q4ADV7 1423 aa18.46■□□□□ 0.55
LINC00116-203ENST00000611969 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
LINC00116-203ENST00000611969 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
LINC00116-203ENST00000611969 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
LINC00116-203ENST00000611969 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
LINC00116-203ENST00000611969 MCOLN1Q9GZU1 580 aa18.44■□□□□ 0.54
LINC00116-203ENST00000611969 LAMB2P55268 1798 aa18.43■□□□□ 0.54
LINC00116-203ENST00000611969 PER1O15534 1290 aaPredicted RBP18.43■□□□□ 0.54
LINC00116-203ENST00000611969 PRKAR2BP31323 418 aa18.43■□□□□ 0.54
LINC00116-203ENST00000611969 RGL2O15211 777 aa18.42■□□□□ 0.54
LINC00116-203ENST00000611969 USP50Q70EL3 339 aaPredicted RBP18.42■□□□□ 0.54
LINC00116-203ENST00000611969 MCM10Q7L590 875 aa18.42■□□□□ 0.54
LINC00116-203ENST00000611969 LARGE2Q8N3Y3 721 aa18.42■□□□□ 0.54
LINC00116-203ENST00000611969 RSPH6AQ9H0K4 717 aa18.42■□□□□ 0.54
LINC00116-203ENST00000611969 PCDH10Q9P2E7 1040 aa18.42■□□□□ 0.54
LINC00116-203ENST00000611969 DLG5Q8TDM6 1919 aa18.42■□□□□ 0.54
LINC00116-203ENST00000611969 GTF2E1P29083 439 aaPredicted RBP18.41■□□□□ 0.54
LINC00116-203ENST00000611969 CNGB1Q14028 1251 aaPredicted RBP18.41■□□□□ 0.54
LINC00116-203ENST00000611969 SAPCD2Q86UD0 394 aa18.41■□□□□ 0.54
LINC00116-203ENST00000611969 PDE4DIPQ5VU43 2346 aa18.41■□□□□ 0.54
LINC00116-203ENST00000611969 MAP2K2P36507 400 aa18.4■□□□□ 0.54
LINC00116-203ENST00000611969 TCERG1O14776 1098 aaKnown RBP18.39■□□□□ 0.53
LINC00116-203ENST00000611969 CELF2O95319 508 aaKnown RBP18.39■□□□□ 0.53
LINC00116-203ENST00000611969 DCTN1Q14203 1278 aa18.39■□□□□ 0.53
LINC00116-203ENST00000611969 CC2D2BQ6DHV5 1058 aa18.39■□□□□ 0.53
LINC00116-203ENST00000611969 C3orf67Q6ZVT6 689 aa18.39■□□□□ 0.53
LINC00116-203ENST00000611969 NIM1KQ8IY84 436 aa18.39■□□□□ 0.53
LINC00116-203ENST00000611969 RPGRQ92834 1020 aaKnown RBP18.39■□□□□ 0.53
LINC00116-203ENST00000611969 GLIS2Q9BZE0 524 aaPredicted RBP18.39■□□□□ 0.53
LINC00116-203ENST00000611969 GPRC5DQ9NZD1 345 aa18.39■□□□□ 0.53
LINC00116-203ENST00000611969 UBN2Q6ZU65 1347 aa18.39■□□□□ 0.53
LINC00116-203ENST00000611969 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
LINC00116-203ENST00000611969 HOXA10P31260 410 aaPredicted RBP18.38■□□□□ 0.53
LINC00116-203ENST00000611969 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
LINC00116-203ENST00000611969 BRPF1P55201 1214 aaPredicted RBP18.37■□□□□ 0.53
LINC00116-203ENST00000611969 DGKZQ13574 1117 aa18.37■□□□□ 0.53
LINC00116-203ENST00000611969 AOC3Q16853 763 aa18.37■□□□□ 0.53
LINC00116-203ENST00000611969 CIAPIN1Q6FI81 312 aa18.37■□□□□ 0.53
LINC00116-203ENST00000611969 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
LINC00116-203ENST00000611969 ADARB2Q9NS39 739 aaKnown RBP18.37■□□□□ 0.53
LINC00116-203ENST00000611969 NPC1L1Q9UHC9 1359 aa18.37■□□□□ 0.53
LINC00116-203ENST00000611969 PPIP5K2O43314 1243 aa18.36■□□□□ 0.53
LINC00116-203ENST00000611969 CA12O43570 354 aa18.36■□□□□ 0.53
LINC00116-203ENST00000611969 TAF1P21675 1872 aa18.36■□□□□ 0.53
LINC00116-203ENST00000611969 GPTP24298 496 aa18.36■□□□□ 0.53
LINC00116-203ENST00000611969 ANKRD36CQ5JPF3 1778 aa18.36■□□□□ 0.53
LINC00116-203ENST00000611969 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
LINC00116-203ENST00000611969 ZIC5Q96T25 663 aa18.36■□□□□ 0.53
LINC00116-203ENST00000611969 MAP3K15Q6ZN16 1313 aa18.35■□□□□ 0.53
LINC00116-203ENST00000611969 GMPSP49915 693 aaPredicted RBP18.35■□□□□ 0.53
LINC00116-203ENST00000611969 TTLL7Q6ZT98 887 aa18.35■□□□□ 0.53
LINC00116-203ENST00000611969 ZNF408Q9H9D4 720 aa18.35■□□□□ 0.53
LINC00116-203ENST00000611969 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
LINC00116-203ENST00000611969 CXCL9Q07325 125 aa18.34■□□□□ 0.53
LINC00116-203ENST00000611969 SUSD4Q5VX71 490 aa18.34■□□□□ 0.53
LINC00116-203ENST00000611969 HHIPL1Q96JK4 782 aa18.34■□□□□ 0.53
LINC00116-203ENST00000611969 CRAMP1Q96RY5 1269 aa18.34■□□□□ 0.53
LINC00116-203ENST00000611969 MIS18AQ9NYP9 233 aa18.34■□□□□ 0.53
LINC00116-203ENST00000611969 GRIPAP1Q4V328 841 aa18.33■□□□□ 0.52
LINC00116-203ENST00000611969 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.52
LINC00116-203ENST00000611969 LRRC37AA6NMS7 1700 aa18.32■□□□□ 0.52
LINC00116-203ENST00000611969 POLR2AP24928 1970 aaKnown RBP18.32■□□□□ 0.52
LINC00116-203ENST00000611969 SHTN1A0MZ66 631 aa18.32■□□□□ 0.52
LINC00116-203ENST00000611969 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
LINC00116-203ENST00000611969 NTSR2O95665 410 aa18.32■□□□□ 0.52
LINC00116-203ENST00000611969 HIRAP54198 1017 aaPredicted RBP18.32■□□□□ 0.52
LINC00116-203ENST00000611969 DLK2Q6UY11 383 aa18.32■□□□□ 0.52
LINC00116-203ENST00000611969 TRPM4Q8TD43 1214 aa18.32■□□□□ 0.52
LINC00116-203ENST00000611969 RBM17Q96I25 401 aaKnown RBP18.32■□□□□ 0.52
LINC00116-203ENST00000611969 ZBTB3Q9H5J0 574 aa18.32■□□□□ 0.52
LINC00116-203ENST00000611969 AKAP11Q9UKA4 1901 aa18.31■□□□□ 0.52
LINC00116-203ENST00000611969 PGAP2Q9UHJ9 254 aa18.31■□□□□ 0.52
LINC00116-203ENST00000611969 ZNRF3Q9ULT6 936 aa18.31■□□□□ 0.52
LINC00116-203ENST00000611969 SOX10P56693 466 aa18.3■□□□□ 0.52
LINC00116-203ENST00000611969 KIF6Q6ZMV9 814 aa18.3■□□□□ 0.52
LINC00116-203ENST00000611969 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
LINC00116-203ENST00000611969 ABCC4O15439 1325 aa18.29■□□□□ 0.52
LINC00116-203ENST00000611969 MYL6BP14649 208 aa18.29■□□□□ 0.52
LINC00116-203ENST00000611969 ZNF34Q8IZ26 560 aa18.29■□□□□ 0.52
LINC00116-203ENST00000611969 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
LINC00116-203ENST00000611969 CDHR2Q9BYE9 1310 aa18.28■□□□□ 0.52
LINC00116-203ENST00000611969 RAD17O75943 681 aa18.28■□□□□ 0.52
LINC00116-203ENST00000611969 NOGQ13253 232 aa18.28■□□□□ 0.52
LINC00116-203ENST00000611969 DDX60Q8IY21 1712 aaKnown RBP18.27■□□□□ 0.52
LINC00116-203ENST00000611969 U2AF1L5P0DN76 240 aaPredicted RBP18.27■□□□□ 0.52
LINC00116-203ENST00000611969 HUNKP57058 714 aa18.27■□□□□ 0.52
LINC00116-203ENST00000611969 U2AF1Q01081 240 aaKnown RBP eCLIP18.27■□□□□ 0.52
LINC00116-203ENST00000611969 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
LINC00116-203ENST00000611969 RTFDC1Q9BY42 306 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms