RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 HSP90AB3PQ58FF7 597 aa12.88□□□□□ -0.35
PCDHGC3-202ENST00000611950 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
PCDHGC3-202ENST00000611950 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-202ENST00000611950 MX1P20591 662 aa12.88□□□□□ -0.35
PCDHGC3-202ENST00000611950 BANK1Q8NDB2 785 aa12.88□□□□□ -0.35
PCDHGC3-202ENST00000611950 LRRCC1Q9C099 1032 aa12.88□□□□□ -0.35
PCDHGC3-202ENST00000611950 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
PCDHGC3-202ENST00000611950 FAM182BQ5T319 152 aa12.87□□□□□ -0.35
PCDHGC3-202ENST00000611950 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
PCDHGC3-202ENST00000611950 ZBTB9Q96C00 473 aa12.87□□□□□ -0.35
PCDHGC3-202ENST00000611950 TTC36A6NLP5 189 aa12.87□□□□□ -0.35
PCDHGC3-202ENST00000611950 BTG4Q9NY30 223 aa12.87□□□□□ -0.35
PCDHGC3-202ENST00000611950 TMEM63CQ9P1W3 806 aa12.87□□□□□ -0.35
PCDHGC3-202ENST00000611950 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
PCDHGC3-202ENST00000611950 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC3-202ENST00000611950 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
PCDHGC3-202ENST00000611950 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
PCDHGC3-202ENST00000611950 CCDC94Q9BW85 323 aaPredicted RBP12.85□□□□□ -0.35
PCDHGC3-202ENST00000611950 CYP2E1P05181 493 aaPredicted RBP12.85□□□□□ -0.35
PCDHGC3-202ENST00000611950 CPA1P15085 419 aa12.85□□□□□ -0.35
PCDHGC3-202ENST00000611950 SURF6O75683 361 aaKnown RBP12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 OSBPL3Q9H4L5 887 aa12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 SALL3Q9BXA9 1300 aa12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 LOC102724159A0A0B4J2E5 919 aa12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 MSNP26038 577 aaKnown RBP12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 CCDC173Q0VFZ6 552 aa12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 PWP2Q15269 919 aaKnown RBP12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
PCDHGC3-202ENST00000611950 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
PCDHGC3-202ENST00000611950 UBTFL1P0CB47 393 aaPredicted RBP12.83□□□□□ -0.36
PCDHGC3-202ENST00000611950 CHMLP26374 656 aa12.83□□□□□ -0.36
PCDHGC3-202ENST00000611950 LRP5O75197 1615 aa12.83□□□□□ -0.36
PCDHGC3-202ENST00000611950 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
PCDHGC3-202ENST00000611950 LTN1O94822 1766 aa12.83□□□□□ -0.36
PCDHGC3-202ENST00000611950 KCNQ3O43525 872 aa12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 USP44Q9H0E7 712 aa12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 NRAPQ86VF7 1730 aa12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 GADD45BO75293 160 aaPredicted RBP12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 GNAI3P08754 354 aa12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 NBPF7P0C2Y1 421 aaPredicted RBP12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 ATP8B2P98198 1209 aa12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
PCDHGC3-202ENST00000611950 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
PCDHGC3-202ENST00000611950 R3HDM1Q15032 1099 aaKnown RBP12.81□□□□□ -0.36
PCDHGC3-202ENST00000611950 NFAT5O94916 1531 aa12.81□□□□□ -0.36
PCDHGC3-202ENST00000611950 SRGAP3O43295 1099 aa12.81□□□□□ -0.36
PCDHGC3-202ENST00000611950 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
PCDHGC3-202ENST00000611950 LGR6Q9HBX8 967 aa12.81□□□□□ -0.36
PCDHGC3-202ENST00000611950 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
PCDHGC3-202ENST00000611950 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 IP6K1Q92551 441 aa12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 PRDM11Q9NQV5 511 aa12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 COL14A1Q05707 1796 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 TRPM3Q9HCF6 1732 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 ZSCAN30Q86W11 494 aa12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 BABAM1Q9NWV8 329 aa12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 MAP2K1Q02750 393 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 R3HCC1Q9Y3T6 440 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-202ENST00000611950 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
PCDHGC3-202ENST00000611950 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
PCDHGC3-202ENST00000611950 ZNF445P59923 1031 aa12.79□□□□□ -0.36
PCDHGC3-202ENST00000611950 RNF217Q8TC41 542 aa12.79□□□□□ -0.36
PCDHGC3-202ENST00000611950 ALS2Q96Q42 1657 aa12.79□□□□□ -0.36
PCDHGC3-202ENST00000611950 SATB1Q01826 763 aa12.79□□□□□ -0.36
PCDHGC3-202ENST00000611950 NBPF9Q3BBW0 867 aa12.79□□□□□ -0.36
PCDHGC3-202ENST00000611950 PI4KAP2A4QPH2 592 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 GOLIM4O00461 696 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 KCNJ4P48050 445 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 PI4KAP1Q8N8J0 262 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 PPP1R9BQ96SB3 815 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 SPATA31A5Q5VU36 1347 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 SPATA31A7Q8IWB4 1347 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 CHRNA2Q15822 529 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 MPRIPQ6WCQ1 1025 aa12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 PA2G4Q9UQ80 394 aaKnown RBP12.78□□□□□ -0.36
PCDHGC3-202ENST00000611950 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.36
PCDHGC3-202ENST00000611950 EZH2Q15910 746 aaKnown RBP12.77□□□□□ -0.36
PCDHGC3-202ENST00000611950 RASEFQ8IZ41 740 aa12.77□□□□□ -0.36
PCDHGC3-202ENST00000611950 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
PCDHGC3-202ENST00000611950 PRAMEF22A3QJZ6 481 aa12.77□□□□□ -0.37
PCDHGC3-202ENST00000611950 CHMP3Q9Y3E7 222 aa12.77□□□□□ -0.37
PCDHGC3-202ENST00000611950 TCHHQ07283 1943 aa12.77□□□□□ -0.37
PCDHGC3-202ENST00000611950 TRIM37O94972 964 aa12.76□□□□□ -0.37
PCDHGC3-202ENST00000611950 TMTC2Q8N394 836 aa12.76□□□□□ -0.37
PCDHGC3-202ENST00000611950 RHPN1Q8TCX5 695 aa12.76□□□□□ -0.37
PCDHGC3-202ENST00000611950 STAP2Q9UGK3 403 aa12.76□□□□□ -0.37
PCDHGC3-202ENST00000611950 FIBPO43427 364 aa12.76□□□□□ -0.37
PCDHGC3-202ENST00000611950 BRD1O95696 1058 aa12.76□□□□□ -0.37
PCDHGC3-202ENST00000611950 LRSAM1Q6UWE0 723 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms