RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 TPM3P06753 285 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 AK2P54819 239 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 BRPF1P55201 1214 aaPredicted RBP15.48■□□□□ 0.07
TCF3-220ENST00000611869 MAP3K11Q16584 847 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 SIRT2Q8IXJ6 389 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 UBAC1Q9BSL1 405 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 NAPBQ9H115 298 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 MINDY4BA8MYZ0 360 aa15.47■□□□□ 0.07
TCF3-220ENST00000611869 HOMER1Q86YM7 354 aa15.47■□□□□ 0.07
TCF3-220ENST00000611869 CCDC82Q8N4S0 544 aa15.47■□□□□ 0.07
TCF3-220ENST00000611869 ACSBG1Q96GR2 724 aa15.47■□□□□ 0.07
TCF3-220ENST00000611869 SUCLG2Q96I99 432 aa15.47■□□□□ 0.07
TCF3-220ENST00000611869 SCAND2PQ9GZW5 306 aaPredicted RBP15.47■□□□□ 0.07
TCF3-220ENST00000611869 SLC52A2Q9HAB3 445 aa15.47■□□□□ 0.07
TCF3-220ENST00000611869 HMGB1P09429 215 aaKnown RBP15.47■□□□□ 0.07
TCF3-220ENST00000611869 CCDC183Q5T5S1 534 aa15.47■□□□□ 0.07
TCF3-220ENST00000611869 GIGYF1O75420 1035 aaPredicted RBP15.47■□□□□ 0.07
TCF3-220ENST00000611869 PDIA4P13667 645 aaKnown RBP15.47■□□□□ 0.07
TCF3-220ENST00000611869 OLFM4Q6UX06 510 aa15.47■□□□□ 0.07
TCF3-220ENST00000611869 CDK12Q9NYV4 1490 aaPredicted RBP15.47■□□□□ 0.07
TCF3-220ENST00000611869 TULP4Q9NRJ4 1543 aa15.47■□□□□ 0.07
TCF3-220ENST00000611869 SMC2O95347 1197 aa15.46■□□□□ 0.07
TCF3-220ENST00000611869 JMYQ8N9B5 988 aa15.46■□□□□ 0.07
TCF3-220ENST00000611869 TRIM34Q9BYJ4 488 aa15.46■□□□□ 0.07
TCF3-220ENST00000611869 IL15P40933 162 aaPredicted RBP15.46■□□□□ 0.07
TCF3-220ENST00000611869 ZSCAN23Q3MJ62 389 aa15.46■□□□□ 0.07
TCF3-220ENST00000611869 CKAP2LQ8IYA6 745 aa15.46■□□□□ 0.07
TCF3-220ENST00000611869 HMG20BQ9P0W2 317 aa15.46■□□□□ 0.07
TCF3-220ENST00000611869 ZNF652Q9Y2D9 606 aa15.46■□□□□ 0.07
TCF3-220ENST00000611869 QRICH2Q9H0J4 1663 aa15.46■□□□□ 0.07
TCF3-220ENST00000611869 DTNBO60941 627 aa15.46■□□□□ 0.07
TCF3-220ENST00000611869 ZSCAN22P10073 491 aaPredicted RBP15.46■□□□□ 0.07
TCF3-220ENST00000611869 A1BGP04217 495 aa15.46■□□□□ 0.06
TCF3-220ENST00000611869 MAP3K12Q12852 859 aa15.46■□□□□ 0.06
TCF3-220ENST00000611869 KIF24Q5T7B8 1368 aa15.45■□□□□ 0.06
TCF3-220ENST00000611869 CCAR2Q8N163 923 aaKnown RBP15.45■□□□□ 0.06
TCF3-220ENST00000611869 NGLY1Q96IV0 654 aa15.45■□□□□ 0.06
TCF3-220ENST00000611869 METTL22Q9BUU2 404 aaPredicted RBP15.45■□□□□ 0.06
TCF3-220ENST00000611869 LAMC1P11047 1609 aa15.45■□□□□ 0.06
TCF3-220ENST00000611869 CDKL5O76039 1030 aa15.45■□□□□ 0.06
TCF3-220ENST00000611869 SLC3A2P08195 630 aaKnown RBP15.45■□□□□ 0.06
TCF3-220ENST00000611869 CNPY2Q9Y2B0 182 aa15.45■□□□□ 0.06
TCF3-220ENST00000611869 GOLGA8BA8MQT2 603 aa15.45■□□□□ 0.06
TCF3-220ENST00000611869 TIMM10P62072 90 aa15.45■□□□□ 0.06
TCF3-220ENST00000611869 PIBF1Q8WXW3 757 aa15.45■□□□□ 0.06
TCF3-220ENST00000611869 C8orf76Q96K31 380 aa15.45■□□□□ 0.06
TCF3-220ENST00000611869 TPM1P09493 284 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 SLC5A1P13866 664 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 ATP2B3Q16720 1220 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 MCMDC2Q4G0Z9 681 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 SETBP1Q9Y6X0 1596 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 CREB3L3Q68CJ9 461 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 ZSCAN30Q86W11 494 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 USP25Q9UHP3 1055 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 USP16Q9Y5T5 823 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 KIDINS220Q9ULH0 1771 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 SSH3Q8TE77 659 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 NDUFB9Q9Y6M9 179 aa15.44■□□□□ 0.06
TCF3-220ENST00000611869 HMGN5P82970 282 aaKnown RBP15.43■□□□□ 0.06
TCF3-220ENST00000611869 TSR1Q2NL82 804 aaKnown RBP15.43■□□□□ 0.06
TCF3-220ENST00000611869 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
TCF3-220ENST00000611869 PCDH11XQ9BZA7 1347 aa15.43■□□□□ 0.06
TCF3-220ENST00000611869 PCDH11YQ9BZA8 1340 aa15.43■□□□□ 0.06
TCF3-220ENST00000611869 SGSM2O43147 1006 aa15.43■□□□□ 0.06
TCF3-220ENST00000611869 USP48Q86UV5 1035 aa15.43■□□□□ 0.06
TCF3-220ENST00000611869 ARHGEF25Q86VW2 580 aa15.43■□□□□ 0.06
TCF3-220ENST00000611869 FAM89AQ96GI7 184 aa15.43■□□□□ 0.06
TCF3-220ENST00000611869 DBNDD2Q9BQY9 259 aa15.43■□□□□ 0.06
TCF3-220ENST00000611869 PAG1Q9NWQ8 432 aa15.43■□□□□ 0.06
TCF3-220ENST00000611869 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
TCF3-220ENST00000611869 GCKRQ14397 625 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 PROSER3Q2NL68 480 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 FAM227BQ96M60 508 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 PDILTQ8N807 584 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 ANKRD20A12PQ8NF67 263 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 IQSEC3Q9UPP2 1182 aaPredicted RBP15.42■□□□□ 0.06
TCF3-220ENST00000611869 CCDC171Q6TFL3 1326 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 BEND3Q5T5X7 828 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 CCDC144CPQ8IYA2 1237 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 HELBQ8NG08 1087 aaPredicted RBP15.42■□□□□ 0.06
TCF3-220ENST00000611869 DIP2CQ9Y2E4 1556 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 ZPR1O75312 459 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 CAVIN4Q5BKX8 364 aa15.42■□□□□ 0.06
TCF3-220ENST00000611869 DNM1Q05193 864 aaKnown RBP15.41■□□□□ 0.06
TCF3-220ENST00000611869 Q6ZUG5 572 aa15.41■□□□□ 0.06
TCF3-220ENST00000611869 PLBD2Q8NHP8 589 aa15.41■□□□□ 0.06
TCF3-220ENST00000611869 PCMTD1Q96MG8 357 aaPredicted RBP15.41■□□□□ 0.06
TCF3-220ENST00000611869 PNPLA6Q8IY17 1366 aa15.41■□□□□ 0.06
TCF3-220ENST00000611869 UBE2HP62256 183 aa15.41■□□□□ 0.06
TCF3-220ENST00000611869 CHST3Q7LGC8 479 aa15.41■□□□□ 0.06
TCF3-220ENST00000611869 FILIP1Q7Z7B0 1213 aa15.41■□□□□ 0.06
TCF3-220ENST00000611869 PRAMEF22A3QJZ6 481 aa15.41■□□□□ 0.06
TCF3-220ENST00000611869 GIMAP6Q6P9H5 292 aa15.41■□□□□ 0.06
TCF3-220ENST00000611869 MICU3Q86XE3 530 aa15.4■□□□□ 0.06
TCF3-220ENST00000611869 ZNF594Q96JF6 807 aaPredicted RBP15.4■□□□□ 0.06
TCF3-220ENST00000611869 IFIT3O14879 490 aaKnown RBP15.4■□□□□ 0.06
TCF3-220ENST00000611869 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
TCF3-220ENST00000611869 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
TCF3-220ENST00000611869 CCDC129Q6ZRS4 1044 aa15.4■□□□□ 0.06
TCF3-220ENST00000611869 CCDC47Q96A33 483 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms