RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 IBTKQ9P2D0 1353 aaPredicted RBP11.23□□□□□ -0.61
SMAD4-217ENST00000611848 GTF2E1P29083 439 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-217ENST00000611848 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
SMAD4-217ENST00000611848 ALDH1L2Q3SY69 923 aa11.22□□□□□ -0.61
SMAD4-217ENST00000611848 KSR2Q6VAB6 950 aa11.22□□□□□ -0.61
SMAD4-217ENST00000611848 G2E3Q7L622 706 aa11.22□□□□□ -0.61
SMAD4-217ENST00000611848 PI4KAP2A4QPH2 592 aa11.21□□□□□ -0.61
SMAD4-217ENST00000611848 FAM177BA6PVY3 158 aa11.21□□□□□ -0.61
SMAD4-217ENST00000611848 PDE6BP35913 854 aa11.21□□□□□ -0.61
SMAD4-217ENST00000611848 SUSD4Q5VX71 490 aa11.21□□□□□ -0.61
SMAD4-217ENST00000611848 PI4KAP1Q8N8J0 262 aa11.21□□□□□ -0.61
SMAD4-217ENST00000611848 EXOC6Q8TAG9 804 aa11.21□□□□□ -0.61
SMAD4-217ENST00000611848 ISCA1Q9BUE6 129 aa11.21□□□□□ -0.61
SMAD4-217ENST00000611848 METTL22Q9BUU2 404 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-217ENST00000611848 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.61
SMAD4-217ENST00000611848 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-217ENST00000611848 PXDNLA1KZ92 1463 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
SMAD4-217ENST00000611848 NLRP10Q86W26 655 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 ANKRD31Q8N7Z5 1873 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 KIAA1551Q9HCM1 1747 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 MAP3K2Q9Y2U5 619 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 ADCY9O60503 1353 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 A0A0G2JLW4 131 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 NTSR2O95665 410 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 DPEP1P16444 411 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 CCDC24Q8N4L8 307 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 MRPL50Q8N5N7 158 aaKnown RBP11.2□□□□□ -0.62
SMAD4-217ENST00000611848 SSH1Q8WYL5 1049 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 MYD88Q99836 296 aa11.2□□□□□ -0.62
SMAD4-217ENST00000611848 ATP5J2-PTCD1G3V325 749 aa11.19□□□□□ -0.62
SMAD4-217ENST00000611848 H0YIN7 160 aa11.19□□□□□ -0.62
SMAD4-217ENST00000611848 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
SMAD4-217ENST00000611848 CCDC191Q8NCU4 936 aa11.19□□□□□ -0.62
SMAD4-217ENST00000611848 DNAAF4Q8WXU2 420 aa11.19□□□□□ -0.62
SMAD4-217ENST00000611848 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
SMAD4-217ENST00000611848 BRCA1P38398 1863 aaKnown RBP11.19□□□□□ -0.62
SMAD4-217ENST00000611848 RIC1Q4ADV7 1423 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 SH3TC1Q8TE82 1336 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 KLRG2A4D1S0 409 aaPredicted RBP11.18□□□□□ -0.62
SMAD4-217ENST00000611848 KCNA3P22001 575 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 CHRNA5P30532 468 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
SMAD4-217ENST00000611848 GPR162Q16538 588 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 ERFEQ4G0M1 354 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 SLC10A5Q5PT55 438 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 C2CD5Q86YS7 1000 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 PIM2Q9P1W9 311 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 DLEC1Q9Y238 1755 aa11.18□□□□□ -0.62
SMAD4-217ENST00000611848 PTPRCP08575 1304 aa11.17□□□□□ -0.62
SMAD4-217ENST00000611848 RARSP54136 660 aaKnown RBP11.17□□□□□ -0.62
SMAD4-217ENST00000611848 SMC4Q9NTJ3 1288 aa11.17□□□□□ -0.62
SMAD4-217ENST00000611848 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-217ENST00000611848 PLIN1O60240 522 aa11.17□□□□□ -0.62
SMAD4-217ENST00000611848 GRIN3BO60391 1043 aa11.17□□□□□ -0.62
SMAD4-217ENST00000611848 IGKV5-2P06315 115 aa11.17□□□□□ -0.62
SMAD4-217ENST00000611848 ZBTB38Q8NAP3 1195 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-217ENST00000611848 MASTLQ96GX5 879 aa11.17□□□□□ -0.62
SMAD4-217ENST00000611848 ABCC12Q96J65 1359 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 SRGNP10124 158 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 HSP90B1P14625 803 aaKnown RBP11.16□□□□□ -0.62
SMAD4-217ENST00000611848 NPR1P16066 1061 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 DALRD3Q5D0E6 543 aaKnown RBP11.16□□□□□ -0.62
SMAD4-217ENST00000611848 STYK1Q6J9G0 422 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 TTLL6Q8N841 843 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 LINS1Q8NG48 757 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 CNKSR1Q969H4 720 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 NLRP3Q96P20 1036 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 BCL2L13Q9BXK5 485 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
SMAD4-217ENST00000611848 NEURL1BA8MQ27 555 aa11.15□□□□□ -0.62
SMAD4-217ENST00000611848 F6X3S4 739 aa11.15□□□□□ -0.62
SMAD4-217ENST00000611848 PCCAP05165 728 aaPredicted RBP11.15□□□□□ -0.62
SMAD4-217ENST00000611848 YBX3P16989 372 aaKnown RBP eCLIP11.15□□□□□ -0.626e-8■■□□□ 12.3
SMAD4-217ENST00000611848 CRY2Q49AN0 593 aa11.15□□□□□ -0.62
SMAD4-217ENST00000611848 ZNF622Q969S3 477 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMAD4-217ENST00000611848 FAM89AQ96GI7 184 aa11.15□□□□□ -0.62
SMAD4-217ENST00000611848 BCS1LQ9Y276 419 aa11.15□□□□□ -0.62
SMAD4-217ENST00000611848 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.63
SMAD4-217ENST00000611848 ALDH1B1P30837 517 aa11.14□□□□□ -0.63
SMAD4-217ENST00000611848 CWF19L2Q2TBE0 894 aaKnown RBP11.14□□□□□ -0.63
SMAD4-217ENST00000611848 BEND3Q5T5X7 828 aa11.14□□□□□ -0.63
SMAD4-217ENST00000611848 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
SMAD4-217ENST00000611848 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.14□□□□□ -0.63
SMAD4-217ENST00000611848 CRBNQ96SW2 442 aa11.14□□□□□ -0.63
SMAD4-217ENST00000611848 WWC3Q9ULE0 1092 aa11.14□□□□□ -0.63
SMAD4-217ENST00000611848 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
SMAD4-217ENST00000611848 CHD4Q14839 1912 aa11.14□□□□□ -0.63
SMAD4-217ENST00000611848 KIF16BQ96L93 1317 aa11.14□□□□□ -0.63
SMAD4-217ENST00000611848 IRS4O14654 1257 aaPredicted RBP11.13□□□□□ -0.63
SMAD4-217ENST00000611848 ALDH1L1O75891 902 aa11.13□□□□□ -0.63
SMAD4-217ENST00000611848 HCLS1P14317 486 aaPredicted RBP11.13□□□□□ -0.63
SMAD4-217ENST00000611848 GCKRQ14397 625 aa11.13□□□□□ -0.63
SMAD4-217ENST00000611848 ARHGAP45Q92619 1136 aa11.13□□□□□ -0.63
SMAD4-217ENST00000611848 RPGRQ92834 1020 aaKnown RBP11.13□□□□□ -0.63
SMAD4-217ENST00000611848 NOB1Q9ULX3 412 aaKnown RBP11.13□□□□□ -0.63
SMAD4-217ENST00000611848 UTRNP46939 3433 aa11.13□□□□□ -0.63
SMAD4-217ENST00000611848 DDX60Q8IY21 1712 aaKnown RBP11.13□□□□□ -0.63
SMAD4-217ENST00000611848 CDHR2Q9BYE9 1310 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 312.9 ms