RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PSMA5P28066 241 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 CCDC8Q9H0W5 538 aaPredicted RBP12.56□□□□□ -0.4
PABPC1-224ENST00000610907 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
PABPC1-224ENST00000610907 CYP46A1Q9Y6A2 500 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 XIRP1Q702N8 1843 aaKnown RBP12.56□□□□□ -0.4
PABPC1-224ENST00000610907 STRCQ7RTU9 1775 aa12.55□□□□□ -0.4
PABPC1-224ENST00000610907 H7C1W4 665 aa12.55□□□□□ -0.4
PABPC1-224ENST00000610907 AK2P54819 239 aa12.55□□□□□ -0.4
PABPC1-224ENST00000610907 CASP7P55210 303 aa12.55□□□□□ -0.4
PABPC1-224ENST00000610907 PTPN12Q05209 780 aaKnown RBP12.55□□□□□ -0.4
PABPC1-224ENST00000610907 EPHA10Q5JZY3 1008 aa12.55□□□□□ -0.4
PABPC1-224ENST00000610907 RNF20Q5VTR2 975 aa12.55□□□□□ -0.4
PABPC1-224ENST00000610907 TOM1L2Q6ZVM7 507 aa12.55□□□□□ -0.4
PABPC1-224ENST00000610907 PANK2Q9BZ23 570 aa12.55□□□□□ -0.4
PABPC1-224ENST00000610907 ALDH8A1Q9H2A2 487 aaPredicted RBP12.55□□□□□ -0.4
PABPC1-224ENST00000610907 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
PABPC1-224ENST00000610907 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
PABPC1-224ENST00000610907 ARFGEF2Q9Y6D5 1785 aa12.54□□□□□ -0.4
PABPC1-224ENST00000610907 A0A087WZG4 1122 aa12.54□□□□□ -0.4
PABPC1-224ENST00000610907 PTH1RQ03431 593 aa12.54□□□□□ -0.4
PABPC1-224ENST00000610907 ZSCAN23Q3MJ62 389 aa12.54□□□□□ -0.4
PABPC1-224ENST00000610907 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
PABPC1-224ENST00000610907 ANP32BQ92688 251 aaKnown RBP12.54□□□□□ -0.4
PABPC1-224ENST00000610907 SIL1Q9H173 461 aa12.54□□□□□ -0.4
PABPC1-224ENST00000610907 GLI3P10071 1580 aa12.54□□□□□ -0.4
PABPC1-224ENST00000610907 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
PABPC1-224ENST00000610907 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-224ENST00000610907 IL2RBP14784 551 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
PABPC1-224ENST00000610907 CASTP20810 708 aaKnown RBP12.53□□□□□ -0.4
PABPC1-224ENST00000610907 NMIQ13287 307 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-224ENST00000610907 TSGA10IPQ3SY00 556 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 TNNI3KQ59H18 835 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
PABPC1-224ENST00000610907 CAVIN1Q6NZI2 390 aaKnown RBP12.53□□□□□ -0.4
PABPC1-224ENST00000610907 RUFY3Q7L099 469 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 UBE3BQ7Z3V4 1068 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 ARXQ96QS3 562 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 FSD1Q9BTV5 496 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 GPR108Q9NPR9 543 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 ATP6V1DQ9Y5K8 247 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 FPGT-TNNI3KV9GXZ4 949 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
PABPC1-224ENST00000610907 CCDC173Q0VFZ6 552 aa12.52□□□□□ -0.4
PABPC1-224ENST00000610907 ANKRD1Q15327 319 aa12.52□□□□□ -0.4
PABPC1-224ENST00000610907 CREB3L3Q68CJ9 461 aa12.52□□□□□ -0.4
PABPC1-224ENST00000610907 NOL8Q76FK4 1167 aaKnown RBP12.52□□□□□ -0.4
PABPC1-224ENST00000610907 TMEM87AQ8NBN3 555 aa12.52□□□□□ -0.4
PABPC1-224ENST00000610907 CCDC191Q8NCU4 936 aa12.52□□□□□ -0.4
PABPC1-224ENST00000610907 GPT2Q8TD30 523 aa12.52□□□□□ -0.4
PABPC1-224ENST00000610907 SYAP1Q96A49 352 aaPredicted RBP12.52□□□□□ -0.4
PABPC1-224ENST00000610907 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.4
PABPC1-224ENST00000610907 BOLA2Q9H3K6 86 aa12.52□□□□□ -0.4
PABPC1-224ENST00000610907 ATG3Q9NT62 314 aa12.52□□□□□ -0.4
PABPC1-224ENST00000610907 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.4
PABPC1-224ENST00000610907 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.4
PABPC1-224ENST00000610907 JCADQ9P266 1359 aa12.52□□□□□ -0.41
PABPC1-224ENST00000610907 MED23Q9ULK4 1368 aa12.52□□□□□ -0.41
PABPC1-224ENST00000610907 NBPF26B4DH59 902 aa12.52□□□□□ -0.41
PABPC1-224ENST00000610907 KCNJ4P48050 445 aa12.52□□□□□ -0.41
PABPC1-224ENST00000610907 NASPP49321 788 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-224ENST00000610907 NBPF14Q5TI25 921 aa12.52□□□□□ -0.41
PABPC1-224ENST00000610907 NBPF10Q6P3W6 841 aaKnown RBP12.52□□□□□ -0.41
PABPC1-224ENST00000610907 NBPF15Q8N660 670 aa12.52□□□□□ -0.41
PABPC1-224ENST00000610907 PPP1R9BQ96SB3 815 aa12.52□□□□□ -0.41
PABPC1-224ENST00000610907 TEX13AQ9BXU3 409 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-224ENST00000610907 TLR7Q9NYK1 1049 aaKnown RBP12.52□□□□□ -0.41
PABPC1-224ENST00000610907 SMC3Q9UQE7 1217 aa12.52□□□□□ -0.41
PABPC1-224ENST00000610907 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-224ENST00000610907 TNS2Q63HR2 1409 aa12.51□□□□□ -0.41
PABPC1-224ENST00000610907 ZSCAN22P10073 491 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-224ENST00000610907 FOXO4P98177 505 aa12.51□□□□□ -0.41
PABPC1-224ENST00000610907 TFCP2Q12800 502 aa12.51□□□□□ -0.41
PABPC1-224ENST00000610907 KRT32Q14532 448 aa12.51□□□□□ -0.41
PABPC1-224ENST00000610907 USPL1Q5W0Q7 1092 aa12.51□□□□□ -0.41
PABPC1-224ENST00000610907 KLHDC4Q8TBB5 520 aa12.51□□□□□ -0.41
PABPC1-224ENST00000610907 FAM227BQ96M60 508 aa12.51□□□□□ -0.41
PABPC1-224ENST00000610907 DBNLQ9UJU6 430 aaKnown RBP12.51□□□□□ -0.41
PABPC1-224ENST00000610907 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
PABPC1-224ENST00000610907 RPAP1Q9BWH6 1393 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-224ENST00000610907 KCPQ6ZWJ8 1503 aa12.5□□□□□ -0.41
PABPC1-224ENST00000610907 ATP5J2-PTCD1G3V325 749 aa12.5□□□□□ -0.41
PABPC1-224ENST00000610907 SLC27A2O14975 620 aa12.5□□□□□ -0.41
PABPC1-224ENST00000610907 STX6O43752 255 aa12.5□□□□□ -0.41
PABPC1-224ENST00000610907 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
PABPC1-224ENST00000610907 LRSAM1Q6UWE0 723 aa12.5□□□□□ -0.41
PABPC1-224ENST00000610907 LMBR1LQ6UX01 489 aa12.5□□□□□ -0.41
PABPC1-224ENST00000610907 TRIM44Q96DX7 344 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-224ENST00000610907 HAUS7Q99871 368 aa12.5□□□□□ -0.41
PABPC1-224ENST00000610907 A0A0D9SFI3 127 aa12.49□□□□□ -0.41
PABPC1-224ENST00000610907 PHF14O94880 888 aa12.49□□□□□ -0.41
PABPC1-224ENST00000610907 IL15P40933 162 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-224ENST00000610907 CSPP1Q1MSJ5 1256 aa12.49□□□□□ -0.41
PABPC1-224ENST00000610907 ADCK5Q3MIX3 580 aa12.49□□□□□ -0.41
PABPC1-224ENST00000610907 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
PABPC1-224ENST00000610907 FBXO3Q9UK99 471 aa12.49□□□□□ -0.41
PABPC1-224ENST00000610907 TAF5LO75529 589 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms