RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
NEK3-205ENST00000610828 ZNF330Q9Y3S2 320 aaPredicted RBP16.49■□□□□ 0.23
NEK3-205ENST00000610828 PKP1Q13835 747 aa16.48■□□□□ 0.23
NEK3-205ENST00000610828 TFCP2Q12800 502 aa16.48■□□□□ 0.23
NEK3-205ENST00000610828 ASAP1Q9ULH1 1129 aa16.48■□□□□ 0.23
NEK3-205ENST00000610828 NUP188Q5SRE5 1749 aa16.47■□□□□ 0.23
NEK3-205ENST00000610828 H7C1W4 665 aa16.47■□□□□ 0.23
NEK3-205ENST00000610828 PIGBQ92521 554 aa16.47■□□□□ 0.23
NEK3-205ENST00000610828 SNX14Q9Y5W7 946 aa16.47■□□□□ 0.23
NEK3-205ENST00000610828 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
NEK3-205ENST00000610828 BAG4O95429 457 aaKnown RBP16.46■□□□□ 0.23
NEK3-205ENST00000610828 FOXO4P98177 505 aa16.46■□□□□ 0.23
NEK3-205ENST00000610828 TNNI3KQ59H18 835 aa16.46■□□□□ 0.23
NEK3-205ENST00000610828 FPGT-TNNI3KV9GXZ4 949 aa16.46■□□□□ 0.23
NEK3-205ENST00000610828 CYP2E1P05181 493 aaPredicted RBP16.45■□□□□ 0.22
NEK3-205ENST00000610828 CLEC17AQ6ZS10 378 aa16.45■□□□□ 0.22
NEK3-205ENST00000610828 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
NEK3-205ENST00000610828 CCDC191Q8NCU4 936 aa16.45■□□□□ 0.22
NEK3-205ENST00000610828 FSD1Q9BTV5 496 aa16.45■□□□□ 0.22
NEK3-205ENST00000610828 ROBO1Q9Y6N7 1651 aa16.45■□□□□ 0.22
NEK3-205ENST00000610828 HIP1O00291 1037 aa16.45■□□□□ 0.22
NEK3-205ENST00000610828 PTMSP20962 102 aa16.45■□□□□ 0.22
NEK3-205ENST00000610828 PTH1RQ03431 593 aa16.45■□□□□ 0.22
NEK3-205ENST00000610828 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
NEK3-205ENST00000610828 DBNLQ9UJU6 430 aaKnown RBP16.45■□□□□ 0.22
NEK3-205ENST00000610828 DNAJC10Q8IXB1 793 aa16.44■□□□□ 0.22
NEK3-205ENST00000610828 COL14A1Q05707 1796 aaKnown RBP16.44■□□□□ 0.22
NEK3-205ENST00000610828 NMIQ13287 307 aaPredicted RBP16.44■□□□□ 0.22
NEK3-205ENST00000610828 CUL4AQ13619 759 aa16.44■□□□□ 0.22
NEK3-205ENST00000610828 ARXQ96QS3 562 aa16.44■□□□□ 0.22
NEK3-205ENST00000610828 SKOR2Q2VWA4 1001 aaPredicted RBP16.43■□□□□ 0.22
NEK3-205ENST00000610828 ATG3Q9NT62 314 aa16.43■□□□□ 0.22
NEK3-205ENST00000610828 TJP1Q07157 1748 aa16.43■□□□□ 0.22
NEK3-205ENST00000610828 VSIG10Q8N0Z9 540 aa16.43■□□□□ 0.22
NEK3-205ENST00000610828 KAT6BQ8WYB5 2073 aa16.43■□□□□ 0.22
NEK3-205ENST00000610828 TEX13AQ9BXU3 409 aaPredicted RBP16.43■□□□□ 0.22
NEK3-205ENST00000610828 CCDC171Q6TFL3 1326 aa16.42■□□□□ 0.22
NEK3-205ENST00000610828 PRPF40BQ6NWY9 871 aaKnown RBP16.42■□□□□ 0.22
NEK3-205ENST00000610828 EDC3Q96F86 508 aaKnown RBP16.42■□□□□ 0.22
NEK3-205ENST00000610828 INTS4Q96HW7 963 aaKnown RBP16.42■□□□□ 0.22
NEK3-205ENST00000610828 BRPF3Q9ULD4 1205 aa16.42■□□□□ 0.22
NEK3-205ENST00000610828 DISP2A7MBM2 1401 aa16.42■□□□□ 0.22
NEK3-205ENST00000610828 STARD3NLO95772 234 aa16.42■□□□□ 0.22
NEK3-205ENST00000610828 ATP5JP18859 108 aa16.42■□□□□ 0.22
NEK3-205ENST00000610828 MCTP1Q6DN14 999 aa16.42■□□□□ 0.22
NEK3-205ENST00000610828 IL27Q8NEV9 243 aa16.42■□□□□ 0.22
NEK3-205ENST00000610828 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
NEK3-205ENST00000610828 DBNDD2Q9BQY9 259 aa16.42■□□□□ 0.22
NEK3-205ENST00000610828 ZDHHC9Q9Y397 364 aa16.42■□□□□ 0.22
NEK3-205ENST00000610828 A0A0D9SFI3 127 aa16.41■□□□□ 0.22
NEK3-205ENST00000610828 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
NEK3-205ENST00000610828 EXOC5O00471 708 aa16.41■□□□□ 0.22
NEK3-205ENST00000610828 CASTP20810 708 aaKnown RBP16.41■□□□□ 0.22
NEK3-205ENST00000610828 KCNJ4P48050 445 aa16.41■□□□□ 0.22
NEK3-205ENST00000610828 ITGB4P16144 1822 aa16.41■□□□□ 0.22
NEK3-205ENST00000610828 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
NEK3-205ENST00000610828 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
NEK3-205ENST00000610828 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
NEK3-205ENST00000610828 TTC14Q96N46 770 aa16.4■□□□□ 0.22
NEK3-205ENST00000610828 DNAJC2Q99543 621 aaKnown RBP16.4■□□□□ 0.22
NEK3-205ENST00000610828 ISCA1Q9BUE6 129 aa16.4■□□□□ 0.22
NEK3-205ENST00000610828 CCDC9Q9Y3X0 531 aaKnown RBP16.4■□□□□ 0.22
NEK3-205ENST00000610828 NDUFB9Q9Y6M9 179 aa16.4■□□□□ 0.22
NEK3-205ENST00000610828 CPA1P15085 419 aa16.4■□□□□ 0.22
NEK3-205ENST00000610828 AK2P54819 239 aa16.4■□□□□ 0.22
NEK3-205ENST00000610828 FOXD4L5Q5VV16 416 aaPredicted RBP16.4■□□□□ 0.22
NEK3-205ENST00000610828 ATG9AQ7Z3C6 839 aa16.4■□□□□ 0.22
NEK3-205ENST00000610828 FOXD4L4Q8WXT5 416 aaPredicted RBP16.4■□□□□ 0.22
NEK3-205ENST00000610828 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
NEK3-205ENST00000610828 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
NEK3-205ENST00000610828 COL16A1Q07092 1604 aaPredicted RBP16.39■□□□□ 0.21
NEK3-205ENST00000610828 NECTIN1Q15223 517 aa16.39■□□□□ 0.21
NEK3-205ENST00000610828 ZNF594Q96JF6 807 aaPredicted RBP16.39■□□□□ 0.21
NEK3-205ENST00000610828 NEUROD6Q96NK8 337 aa16.39■□□□□ 0.21
NEK3-205ENST00000610828 AHDC1Q5TGY3 1603 aaPredicted RBP16.39■□□□□ 0.21
NEK3-205ENST00000610828 ZKSCAN1P17029 563 aaPredicted RBP16.38■□□□□ 0.21
NEK3-205ENST00000610828 ADCK5Q3MIX3 580 aa16.38■□□□□ 0.21
NEK3-205ENST00000610828 MAP4K1Q92918 833 aa16.38■□□□□ 0.21
NEK3-205ENST00000610828 LARP6Q9BRS8 491 aaKnown RBP16.38■□□□□ 0.21
NEK3-205ENST00000610828 DDX49Q9Y6V7 483 aaKnown RBP16.38■□□□□ 0.21
NEK3-205ENST00000610828 BCL9O00512 1426 aa16.38■□□□□ 0.21
NEK3-205ENST00000610828 IL15P40933 162 aaPredicted RBP16.38■□□□□ 0.21
NEK3-205ENST00000610828 COL22A1Q8NFW1 1626 aaPredicted RBP16.38■□□□□ 0.21
NEK3-205ENST00000610828 FSD2A1L4K1 749 aa16.37■□□□□ 0.21
NEK3-205ENST00000610828 ADAMTS2O95450 1211 aa16.37■□□□□ 0.21
NEK3-205ENST00000610828 LRRC24Q50LG9 513 aa16.37■□□□□ 0.21
NEK3-205ENST00000610828 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
NEK3-205ENST00000610828 SNRKQ9NRH2 765 aa16.37■□□□□ 0.21
NEK3-205ENST00000610828 RUFY3Q7L099 469 aa16.37■□□□□ 0.21
NEK3-205ENST00000610828 ZNF589Q86UQ0 364 aaPredicted RBP16.37■□□□□ 0.21
NEK3-205ENST00000610828 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
NEK3-205ENST00000610828 LIMCH1Q9UPQ0 1083 aa16.37■□□□□ 0.21
NEK3-205ENST00000610828 EYA2O00167 538 aa16.36■□□□□ 0.21
NEK3-205ENST00000610828 TIMM10P62072 90 aa16.36■□□□□ 0.21
NEK3-205ENST00000610828 KCNB2Q92953 911 aa16.36■□□□□ 0.21
NEK3-205ENST00000610828 SLC4A9Q96Q91 983 aa16.36■□□□□ 0.21
NEK3-205ENST00000610828 HAUS7Q99871 368 aa16.36■□□□□ 0.21
NEK3-205ENST00000610828 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
NEK3-205ENST00000610828 MED23Q9ULK4 1368 aa16.36■□□□□ 0.21
NEK3-205ENST00000610828 PLCH1Q4KWH8 1693 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms