RNA–Protein interactions for RNA: ENST00000610236.1

LINC00649-215, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 196 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-215ENST00000610236 IL16Q14005 1332 aa17.1■□□□□ 0.33
LINC00649-215ENST00000610236 HOXA10P31260 410 aaPredicted RBP17.09■□□□□ 0.33
LINC00649-215ENST00000610236 SLC10A5Q5PT55 438 aa17.09■□□□□ 0.33
LINC00649-215ENST00000610236 NLRP10Q86W26 655 aa17.09■□□□□ 0.33
LINC00649-215ENST00000610236 ELL2O00472 640 aaPredicted RBP17.08■□□□□ 0.32
LINC00649-215ENST00000610236 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.32
LINC00649-215ENST00000610236 RPGRQ92834 1020 aaKnown RBP17.08■□□□□ 0.32
LINC00649-215ENST00000610236 NLRP3Q96P20 1036 aa17.08■□□□□ 0.32
LINC00649-215ENST00000610236 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.32
LINC00649-215ENST00000610236 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
LINC00649-215ENST00000610236 CCDC30Q5VVM6 783 aa17.07■□□□□ 0.32
LINC00649-215ENST00000610236 RTKN2Q8IZC4 609 aa17.07■□□□□ 0.32
LINC00649-215ENST00000610236 RBM17Q96I25 401 aaKnown RBP17.07■□□□□ 0.32
LINC00649-215ENST00000610236 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
LINC00649-215ENST00000610236 SBF1O95248 1867 aa17.06■□□□□ 0.32
LINC00649-215ENST00000610236 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
LINC00649-215ENST00000610236 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
LINC00649-215ENST00000610236 TOMM70O94826 608 aa17.06■□□□□ 0.32
LINC00649-215ENST00000610236 CC2D2BQ6DHV5 1058 aa17.06■□□□□ 0.32
LINC00649-215ENST00000610236 ISCA1Q9BUE6 129 aa17.06■□□□□ 0.32
LINC00649-215ENST00000610236 ARFGEF2Q9Y6D5 1785 aa17.06■□□□□ 0.32
LINC00649-215ENST00000610236 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
LINC00649-215ENST00000610236 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
LINC00649-215ENST00000610236 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
LINC00649-215ENST00000610236 GOLGA2Q08379 1002 aa17.05■□□□□ 0.32
LINC00649-215ENST00000610236 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
LINC00649-215ENST00000610236 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
LINC00649-215ENST00000610236 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
LINC00649-215ENST00000610236 FER1L6Q2WGJ9 1857 aa17.04■□□□□ 0.32
LINC00649-215ENST00000610236 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
LINC00649-215ENST00000610236 GRIPAP1Q4V328 841 aa17.04■□□□□ 0.32
LINC00649-215ENST00000610236 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
LINC00649-215ENST00000610236 C3orf67Q6ZVT6 689 aa17.04■□□□□ 0.32
LINC00649-215ENST00000610236 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
LINC00649-215ENST00000610236 C16orf71Q8IYS4 520 aaPredicted RBP17.03■□□□□ 0.32
LINC00649-215ENST00000610236 FAM9BQ8IZU0 186 aa17.03■□□□□ 0.32
LINC00649-215ENST00000610236 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
LINC00649-215ENST00000610236 PHAXQ9H814 394 aaKnown RBP17.03■□□□□ 0.32
LINC00649-215ENST00000610236 RRAGCQ9HB90 399 aa17.03■□□□□ 0.32
LINC00649-215ENST00000610236 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
LINC00649-215ENST00000610236 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
LINC00649-215ENST00000610236 RBM46Q8TBY0 533 aaKnown RBP17.02■□□□□ 0.32
LINC00649-215ENST00000610236 PSMD1Q99460 953 aa17.02■□□□□ 0.32
LINC00649-215ENST00000610236 ANKRD36CQ5JPF3 1778 aa17.02■□□□□ 0.31
LINC00649-215ENST00000610236 ATP5J2-PTCD1G3V325 749 aa17.01■□□□□ 0.31
LINC00649-215ENST00000610236 PPEF1O14829 653 aaPredicted RBP17.01■□□□□ 0.31
LINC00649-215ENST00000610236 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
LINC00649-215ENST00000610236 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
LINC00649-215ENST00000610236 STK31Q9BXU1 1019 aa17.01■□□□□ 0.31
LINC00649-215ENST00000610236 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
LINC00649-215ENST00000610236 SNED1Q8TER0 1413 aa17.01■□□□□ 0.31
LINC00649-215ENST00000610236 VEGFAP15692 232 aaPredicted RBP17■□□□□ 0.31
LINC00649-215ENST00000610236 HSPA6P17066 643 aa17■□□□□ 0.31
LINC00649-215ENST00000610236 SYNE4Q8N205 404 aa17■□□□□ 0.31
LINC00649-215ENST00000610236 TMX4Q9H1E5 349 aaPredicted RBP17■□□□□ 0.31
LINC00649-215ENST00000610236 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
LINC00649-215ENST00000610236 ABCC4O15439 1325 aa16.99■□□□□ 0.31
LINC00649-215ENST00000610236 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
LINC00649-215ENST00000610236 BBOX1O75936 387 aa16.99■□□□□ 0.31
LINC00649-215ENST00000610236 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
LINC00649-215ENST00000610236 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
LINC00649-215ENST00000610236 FAM89AQ96GI7 184 aa16.99■□□□□ 0.31
LINC00649-215ENST00000610236 CACNA1SQ13698 1873 aa16.99■□□□□ 0.31
LINC00649-215ENST00000610236 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
LINC00649-215ENST00000610236 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
LINC00649-215ENST00000610236 CCDC191Q8NCU4 936 aa16.98■□□□□ 0.31
LINC00649-215ENST00000610236 MYD88Q99836 296 aa16.98■□□□□ 0.31
LINC00649-215ENST00000610236 METTL22Q9BUU2 404 aaPredicted RBP16.98■□□□□ 0.31
LINC00649-215ENST00000610236 ATP6V0A2Q9Y487 856 aa16.98■□□□□ 0.31
LINC00649-215ENST00000610236 FSTL1Q12841 308 aa16.97■□□□□ 0.31
LINC00649-215ENST00000610236 GRAPQ13588 217 aa16.97■□□□□ 0.31
LINC00649-215ENST00000610236 SF3B3Q15393 1217 aaKnown RBP16.97■□□□□ 0.31
LINC00649-215ENST00000610236 ZBTB38Q8NAP3 1195 aaPredicted RBP16.97■□□□□ 0.31
LINC00649-215ENST00000610236 GRAPLQ8TC17 118 aaPredicted RBP16.97■□□□□ 0.31
LINC00649-215ENST00000610236 IRS4O14654 1257 aaPredicted RBP16.96■□□□□ 0.31
LINC00649-215ENST00000610236 KSR2Q6VAB6 950 aa16.96■□□□□ 0.31
LINC00649-215ENST00000610236 TMC4Q7Z404 712 aa16.96■□□□□ 0.31
LINC00649-215ENST00000610236 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
LINC00649-215ENST00000610236 MYH16Q9H6N6 1097 aa16.96■□□□□ 0.31
LINC00649-215ENST00000610236 DICER1Q9UPY3 1922 aaKnown RBP16.96■□□□□ 0.3
LINC00649-215ENST00000610236 CCDC88AQ3V6T2 1871 aa16.95■□□□□ 0.3
LINC00649-215ENST00000610236 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
LINC00649-215ENST00000610236 DDNO94850 711 aaPredicted RBP16.95■□□□□ 0.3
LINC00649-215ENST00000610236 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
LINC00649-215ENST00000610236 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
LINC00649-215ENST00000610236 ZNF428Q96B54 188 aa16.95■□□□□ 0.3
LINC00649-215ENST00000610236 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
LINC00649-215ENST00000610236 MAP3K2Q9Y2U5 619 aa16.95■□□□□ 0.3
LINC00649-215ENST00000610236 WDR90Q96KV7 1748 aa16.94■□□□□ 0.3
LINC00649-215ENST00000610236 PI4KAP2A4QPH2 592 aa16.94■□□□□ 0.3
LINC00649-215ENST00000610236 POTECB2RU33 542 aa16.94■□□□□ 0.3
LINC00649-215ENST00000610236 FZD9O00144 591 aa16.94■□□□□ 0.3
LINC00649-215ENST00000610236 VAMP4O75379 141 aa16.94■□□□□ 0.3
LINC00649-215ENST00000610236 PCCAP05165 728 aaPredicted RBP16.94■□□□□ 0.3
LINC00649-215ENST00000610236 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
LINC00649-215ENST00000610236 PI4KAP1Q8N8J0 262 aa16.94■□□□□ 0.3
LINC00649-215ENST00000610236 SMC1BQ8NDV3 1235 aa16.94■□□□□ 0.3
LINC00649-215ENST00000610236 L3MBTL3Q96JM7 780 aaPredicted RBP16.94■□□□□ 0.3
LINC00649-215ENST00000610236 VPS33BQ9H267 617 aa16.94■□□□□ 0.3
LINC00649-215ENST00000610236 APLP1P51693 650 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms