RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 HSPA4P34932 840 aa18.54■□□□□ 0.56
AC009961.1-203ENST00000607836 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
AC009961.1-203ENST00000607836 IL27Q8NEV9 243 aa18.54■□□□□ 0.56
AC009961.1-203ENST00000607836 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
AC009961.1-203ENST00000607836 DBNLQ9UJU6 430 aaKnown RBP18.54■□□□□ 0.56
AC009961.1-203ENST00000607836 RAD50Q92878 1312 aa18.53■□□□□ 0.56
AC009961.1-203ENST00000607836 CWC25Q9NXE8 425 aaPredicted RBP18.53■□□□□ 0.56
AC009961.1-203ENST00000607836 SNX14Q9Y5W7 946 aa18.53■□□□□ 0.56
AC009961.1-203ENST00000607836 SYNE4Q8N205 404 aa18.53■□□□□ 0.56
AC009961.1-203ENST00000607836 ATG3Q9NT62 314 aa18.53■□□□□ 0.56
AC009961.1-203ENST00000607836 FOXO4P98177 505 aa18.52■□□□□ 0.56
AC009961.1-203ENST00000607836 NMIQ13287 307 aaPredicted RBP18.52■□□□□ 0.56
AC009961.1-203ENST00000607836 GBP4Q96PP9 640 aa18.52■□□□□ 0.56
AC009961.1-203ENST00000607836 DBNDD2Q9BQY9 259 aa18.52■□□□□ 0.56
AC009961.1-203ENST00000607836 FSD1Q9BTV5 496 aa18.52■□□□□ 0.56
AC009961.1-203ENST00000607836 NUTM2BA6NNL0 878 aaPredicted RBP18.52■□□□□ 0.55
AC009961.1-203ENST00000607836 NUTM2EB1AL46 878 aaPredicted RBP18.52■□□□□ 0.55
AC009961.1-203ENST00000607836 FOXD4L6Q3SYB3 417 aaPredicted RBP18.52■□□□□ 0.55
AC009961.1-203ENST00000607836 PRPF40BQ6NWY9 871 aaKnown RBP18.52■□□□□ 0.55
AC009961.1-203ENST00000607836 FOXD4L3Q6VB84 417 aaPredicted RBP18.52■□□□□ 0.55
AC009961.1-203ENST00000607836 NUTM2AQ8IVF1 878 aaPredicted RBP18.52■□□□□ 0.55
AC009961.1-203ENST00000607836 EVI5LQ96CN4 794 aa18.52■□□□□ 0.55
AC009961.1-203ENST00000607836 COPRSQ9NQ92 184 aa18.52■□□□□ 0.55
AC009961.1-203ENST00000607836 NHSL1Q5SYE7 1610 aa18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 TOGARAM1Q9Y4F4 1720 aa18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 A0A0D9SFI3 127 aa18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 DDX11L8A8MPP1 907 aa18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 COL9A3Q14050 684 aaPredicted RBP18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 RABL6Q3YEC7 729 aaPredicted RBP18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 TNNI3KQ59H18 835 aa18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 DNAJC2Q99543 621 aaKnown RBP18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 FPGT-TNNI3KV9GXZ4 949 aa18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 H7C1W4 665 aa18.51■□□□□ 0.55
AC009961.1-203ENST00000607836 BAG4O95429 457 aaKnown RBP18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 GPTP24298 496 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 TIMM10P62072 90 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 ADCK5Q3MIX3 580 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 LRRC24Q50LG9 513 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 MCTP1Q6DN14 999 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 NEUROD6Q96NK8 337 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 SLC4A9Q96Q91 983 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 ZDHHC9Q9Y397 364 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 ANAPC15P60006 121 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 SLFNL1Q499Z3 407 aa18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
AC009961.1-203ENST00000607836 PUS3Q9BZE2 481 aaKnown RBP18.49■□□□□ 0.55
AC009961.1-203ENST00000607836 LAMB4A4D0S4 1761 aa18.49■□□□□ 0.55
AC009961.1-203ENST00000607836 PIP4K2BP78356 416 aa18.49■□□□□ 0.55
AC009961.1-203ENST00000607836 CASTP20810 708 aaKnown RBP18.48■□□□□ 0.55
AC009961.1-203ENST00000607836 UBR2Q8IWV8 1755 aa18.48■□□□□ 0.55
AC009961.1-203ENST00000607836 PLEKHG2Q9H7P9 1386 aa18.48■□□□□ 0.55
AC009961.1-203ENST00000607836 KCNJ4P48050 445 aa18.48■□□□□ 0.55
AC009961.1-203ENST00000607836 PRIM1P49642 420 aaKnown RBP18.48■□□□□ 0.55
AC009961.1-203ENST00000607836 HLFQ16534 295 aa18.48■□□□□ 0.55
AC009961.1-203ENST00000607836 ZNF589Q86UQ0 364 aaPredicted RBP18.48■□□□□ 0.55
AC009961.1-203ENST00000607836 ACSBG1Q96GR2 724 aa18.48■□□□□ 0.55
AC009961.1-203ENST00000607836 ROBO1Q9Y6N7 1651 aa18.47■□□□□ 0.55
AC009961.1-203ENST00000607836 EXOC5O00471 708 aa18.47■□□□□ 0.55
AC009961.1-203ENST00000607836 DDX46Q7L014 1031 aaKnown RBP18.47■□□□□ 0.55
AC009961.1-203ENST00000607836 TAF6LQ9Y6J9 622 aa18.47■□□□□ 0.55
AC009961.1-203ENST00000607836 ERBB4Q15303 1308 aa18.47■□□□□ 0.55
AC009961.1-203ENST00000607836 RUFY2Q8WXA3 655 aa18.47■□□□□ 0.55
AC009961.1-203ENST00000607836 AK2P54819 239 aa18.46■□□□□ 0.55
AC009961.1-203ENST00000607836 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
AC009961.1-203ENST00000607836 TCEANC2Q96MN5 208 aa18.46■□□□□ 0.55
AC009961.1-203ENST00000607836 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
AC009961.1-203ENST00000607836 SEC62Q99442 399 aaKnown RBP18.46■□□□□ 0.55
AC009961.1-203ENST00000607836 TNS2Q63HR2 1409 aa18.46■□□□□ 0.55
AC009961.1-203ENST00000607836 CYP2E1P05181 493 aaPredicted RBP18.46■□□□□ 0.55
AC009961.1-203ENST00000607836 NUCB2P80303 420 aa18.46■□□□□ 0.55
AC009961.1-203ENST00000607836 CCDC129Q6ZRS4 1044 aa18.46■□□□□ 0.55
AC009961.1-203ENST00000607836 CCDC191Q8NCU4 936 aa18.45■□□□□ 0.54
AC009961.1-203ENST00000607836 RBM8AQ9Y5S9 174 aaKnown RBP18.45■□□□□ 0.54
AC009961.1-203ENST00000607836 TCIRG1Q13488 830 aa18.45■□□□□ 0.54
AC009961.1-203ENST00000607836 CWC22Q9HCG8 908 aaKnown RBP18.45■□□□□ 0.54
AC009961.1-203ENST00000607836 TBC1D2BQ9UPU7 963 aa18.45■□□□□ 0.54
AC009961.1-203ENST00000607836 ZBTB1Q9Y2K1 713 aa18.45■□□□□ 0.54
AC009961.1-203ENST00000607836 CCDC171Q6TFL3 1326 aa18.44■□□□□ 0.54
AC009961.1-203ENST00000607836 LARGE1O95461 756 aa18.44■□□□□ 0.54
AC009961.1-203ENST00000607836 NCLP19338 710 aaKnown RBP18.44■□□□□ 0.54
AC009961.1-203ENST00000607836 STARD3NLO95772 234 aa18.44■□□□□ 0.54
AC009961.1-203ENST00000607836 KIF6Q6ZMV9 814 aa18.43■□□□□ 0.54
AC009961.1-203ENST00000607836 RUFY3Q7L099 469 aa18.43■□□□□ 0.54
AC009961.1-203ENST00000607836 FAM177BA6PVY3 158 aa18.43■□□□□ 0.54
AC009961.1-203ENST00000607836 TPRNQ4KMQ1 711 aa18.43■□□□□ 0.54
AC009961.1-203ENST00000607836 PANK2Q9BZ23 570 aa18.43■□□□□ 0.54
AC009961.1-203ENST00000607836 ISCA1Q9BUE6 129 aa18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 DDX49Q9Y6V7 483 aaKnown RBP18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 PAPPAQ13219 1627 aa18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 PRPF40AO75400 957 aaKnown RBP18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 ATP5JP18859 108 aa18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 MCM2P49736 904 aa18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 CUL4AQ13619 759 aa18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 NECTIN1Q15223 517 aa18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 CREB3L3Q68CJ9 461 aa18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 TTC14Q96N46 770 aa18.42■□□□□ 0.54
AC009961.1-203ENST00000607836 NUP188Q5SRE5 1749 aa18.41■□□□□ 0.54
AC009961.1-203ENST00000607836 ITGB4P16144 1822 aa18.41■□□□□ 0.54
AC009961.1-203ENST00000607836 GOLGA6L3A6NEY3 463 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms