RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ZNF219Q9P2Y4 722 aaPredicted RBP21.28■■□□□ 1
LINC00240-203ENST00000606878 RNF123Q5XPI4 1314 aa21.28■■□□□ 1
LINC00240-203ENST00000606878 NUP98P52948 1817 aa21.27■■□□□ 1
LINC00240-203ENST00000606878 ATP5J2-PTCD1G3V325 749 aa21.27■■□□□ 1
LINC00240-203ENST00000606878 TRIM28Q13263 835 aaKnown RBP21.27■■□□□ 1
LINC00240-203ENST00000606878 PRPF40BQ6NWY9 871 aaKnown RBP21.27■■□□□ 1
LINC00240-203ENST00000606878 MIER1Q8N108 512 aa21.27■■□□□ 1
LINC00240-203ENST00000606878 ZNF521Q96K83 1311 aa21.27■□□□□ 0.99
LINC00240-203ENST00000606878 CRY2Q49AN0 593 aa21.26■□□□□ 0.99
LINC00240-203ENST00000606878 SOGA3Q5TF21 947 aa21.26■□□□□ 0.99
LINC00240-203ENST00000606878 C9orf131Q5VYM1 1079 aa21.26■□□□□ 0.99
LINC00240-203ENST00000606878 RPGRQ92834 1020 aaKnown RBP21.26■□□□□ 0.99
LINC00240-203ENST00000606878 KSR2Q6VAB6 950 aa21.25■□□□□ 0.99
LINC00240-203ENST00000606878 SH3TC1Q8TE82 1336 aa21.25■□□□□ 0.99
LINC00240-203ENST00000606878 ABCC12Q96J65 1359 aa21.24■□□□□ 0.99
LINC00240-203ENST00000606878 HOXA10P31260 410 aaPredicted RBP21.24■□□□□ 0.99
LINC00240-203ENST00000606878 RBM17Q96I25 401 aaKnown RBP21.24■□□□□ 0.99
LINC00240-203ENST00000606878 HCLS1P14317 486 aaPredicted RBP21.23■□□□□ 0.99
LINC00240-203ENST00000606878 C7orf43Q8WVR3 580 aa21.23■□□□□ 0.99
LINC00240-203ENST00000606878 MYD88Q99836 296 aa21.23■□□□□ 0.99
LINC00240-203ENST00000606878 METTL22Q9BUU2 404 aaPredicted RBP21.23■□□□□ 0.99
LINC00240-203ENST00000606878 RNF181Q9P0P0 153 aa21.23■□□□□ 0.99
LINC00240-203ENST00000606878 BRCA1P38398 1863 aaKnown RBP21.23■□□□□ 0.99
LINC00240-203ENST00000606878 ANKRD31Q8N7Z5 1873 aa21.23■□□□□ 0.99
LINC00240-203ENST00000606878 PI4KAP2A4QPH2 592 aa21.22■□□□□ 0.99
LINC00240-203ENST00000606878 E9PSI1 815 aa21.22■□□□□ 0.99
LINC00240-203ENST00000606878 LMNB1P20700 586 aa21.22■□□□□ 0.99
LINC00240-203ENST00000606878 SYNE4Q8N205 404 aa21.22■□□□□ 0.99
LINC00240-203ENST00000606878 PI4KAP1Q8N8J0 262 aa21.22■□□□□ 0.99
LINC00240-203ENST00000606878 ZNF428Q96B54 188 aa21.22■□□□□ 0.99
LINC00240-203ENST00000606878 CRAMP1Q96RY5 1269 aa21.22■□□□□ 0.99
LINC00240-203ENST00000606878 MAP3K2Q9Y2U5 619 aa21.22■□□□□ 0.99
LINC00240-203ENST00000606878 G2E3Q7L622 706 aa21.21■□□□□ 0.99
LINC00240-203ENST00000606878 CCDC191Q8NCU4 936 aa21.21■□□□□ 0.99
LINC00240-203ENST00000606878 FAM89AQ96GI7 184 aa21.21■□□□□ 0.99
LINC00240-203ENST00000606878 RASSF7Q02833 373 aa21.2■□□□□ 0.98
LINC00240-203ENST00000606878 NEXNQ0ZGT2 675 aa21.2■□□□□ 0.98
LINC00240-203ENST00000606878 C3orf67Q6ZVT6 689 aa21.2■□□□□ 0.98
LINC00240-203ENST00000606878 GPBP1L1Q9HC44 474 aaPredicted RBP21.2■□□□□ 0.98
LINC00240-203ENST00000606878 ARFGEF1Q9Y6D6 1849 aa21.2■□□□□ 0.98
LINC00240-203ENST00000606878 RIC1Q4ADV7 1423 aa21.2■□□□□ 0.98
LINC00240-203ENST00000606878 NFKBIEO00221 500 aa21.19■□□□□ 0.98
LINC00240-203ENST00000606878 HSP90B1P14625 803 aaKnown RBP21.19■□□□□ 0.98
LINC00240-203ENST00000606878 SLFN5Q08AF3 891 aa21.19■□□□□ 0.98
LINC00240-203ENST00000606878 FLIIQ13045 1269 aa21.19■□□□□ 0.98
LINC00240-203ENST00000606878 CCDC93Q567U6 631 aa21.19■□□□□ 0.98
LINC00240-203ENST00000606878 CC2D2BQ6DHV5 1058 aa21.19■□□□□ 0.98
LINC00240-203ENST00000606878 RTKN2Q8IZC4 609 aa21.19■□□□□ 0.98
LINC00240-203ENST00000606878 ZNF526Q8TF50 670 aaPredicted RBP21.19■□□□□ 0.98
LINC00240-203ENST00000606878 TAOK3Q9H2K8 898 aa21.19■□□□□ 0.98
LINC00240-203ENST00000606878 RTL5Q5HYW3 569 aaPredicted RBP21.18■□□□□ 0.98
LINC00240-203ENST00000606878 ZBTB38Q8NAP3 1195 aaPredicted RBP21.18■□□□□ 0.98
LINC00240-203ENST00000606878 TMX4Q9H1E5 349 aaPredicted RBP21.18■□□□□ 0.98
LINC00240-203ENST00000606878 CWC25Q9NXE8 425 aaPredicted RBP21.18■□□□□ 0.98
LINC00240-203ENST00000606878 ADCY9O60503 1353 aa21.18■□□□□ 0.98
LINC00240-203ENST00000606878 FKBP5Q13451 457 aaPredicted RBP21.17■□□□□ 0.98
LINC00240-203ENST00000606878 DDX46Q7L014 1031 aaKnown RBP21.17■□□□□ 0.98
LINC00240-203ENST00000606878 DLEC1Q9Y238 1755 aa21.16■□□□□ 0.98
LINC00240-203ENST00000606878 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
LINC00240-203ENST00000606878 IRS4O14654 1257 aaPredicted RBP21.16■□□□□ 0.98
LINC00240-203ENST00000606878 BBOX1O75936 387 aa21.16■□□□□ 0.98
LINC00240-203ENST00000606878 GRIPAP1Q4V328 841 aa21.16■□□□□ 0.98
LINC00240-203ENST00000606878 PCCAP05165 728 aaPredicted RBP21.15■□□□□ 0.98
LINC00240-203ENST00000606878 PRELPP51888 382 aa21.15■□□□□ 0.98
LINC00240-203ENST00000606878 CDCA7LQ96GN5 454 aa21.15■□□□□ 0.98
LINC00240-203ENST00000606878 SLX4Q8IY92 1834 aa21.14■□□□□ 0.97
LINC00240-203ENST00000606878 SF3B3Q15393 1217 aaKnown RBP21.14■□□□□ 0.97
LINC00240-203ENST00000606878 OLFM4Q6UX06 510 aa21.14■□□□□ 0.97
LINC00240-203ENST00000606878 COL11A2P13942 1736 aaPredicted RBP21.13■□□□□ 0.97
LINC00240-203ENST00000606878 ZC3H4Q9UPT8 1303 aaKnown RBP21.13■□□□□ 0.97
LINC00240-203ENST00000606878 PPEF1O14829 653 aaPredicted RBP21.13■□□□□ 0.97
LINC00240-203ENST00000606878 IGKV5-2P06315 115 aa21.13■□□□□ 0.97
LINC00240-203ENST00000606878 FKBP4Q02790 459 aaKnown RBP eCLIP21.13■□□□□ 0.97
LINC00240-203ENST00000606878 DNAAF4Q8WXU2 420 aa21.13■□□□□ 0.97
LINC00240-203ENST00000606878 JARID2Q92833 1246 aaPredicted RBP21.12■□□□□ 0.97
LINC00240-203ENST00000606878 ABCC4O15439 1325 aa21.11■□□□□ 0.97
LINC00240-203ENST00000606878 KDM2BQ8NHM5 1336 aa21.11■□□□□ 0.97
LINC00240-203ENST00000606878 NEURL1BA8MQ27 555 aa21.11■□□□□ 0.97
LINC00240-203ENST00000606878 CWF19L2Q2TBE0 894 aaKnown RBP21.11■□□□□ 0.97
LINC00240-203ENST00000606878 TRMT2AQ8IZ69 625 aaKnown RBP21.11■□□□□ 0.97
LINC00240-203ENST00000606878 ATP6V0A2Q9Y487 856 aa21.11■□□□□ 0.97
LINC00240-203ENST00000606878 PDE8AO60658 829 aa21.1■□□□□ 0.97
LINC00240-203ENST00000606878 GRAPQ13588 217 aa21.1■□□□□ 0.97
LINC00240-203ENST00000606878 DPY19L2Q6NUT2 758 aa21.1■□□□□ 0.97
LINC00240-203ENST00000606878 SP8Q8IXZ3 490 aa21.1■□□□□ 0.97
LINC00240-203ENST00000606878 LINS1Q8NG48 757 aa21.1■□□□□ 0.97
LINC00240-203ENST00000606878 GRAPLQ8TC17 118 aaPredicted RBP21.1■□□□□ 0.97
LINC00240-203ENST00000606878 TMC4Q7Z404 712 aa21.09■□□□□ 0.97
LINC00240-203ENST00000606878 PSMD1Q99460 953 aa21.09■□□□□ 0.97
LINC00240-203ENST00000606878 ZNF277Q9NRM2 450 aaPredicted RBP21.09■□□□□ 0.97
LINC00240-203ENST00000606878 ANKRD36CQ5JPF3 1778 aa21.09■□□□□ 0.97
LINC00240-203ENST00000606878 H7C1W4 665 aa21.08■□□□□ 0.97
LINC00240-203ENST00000606878 GCKRQ14397 625 aa21.08■□□□□ 0.97
LINC00240-203ENST00000606878 TNRC6CQ9HCJ0 1690 aaKnown RBP21.08■□□□□ 0.96
LINC00240-203ENST00000606878 CDHR2Q9BYE9 1310 aa21.07■□□□□ 0.96
LINC00240-203ENST00000606878 GLTPD2A6NH11 291 aa21.07■□□□□ 0.96
LINC00240-203ENST00000606878 F6X3S4 739 aa21.07■□□□□ 0.96
LINC00240-203ENST00000606878 CCDC152Q4G0S7 254 aa21.07■□□□□ 0.96
LINC00240-203ENST00000606878 IARSP41252 1262 aaKnown RBP21.06■□□□□ 0.96
LINC00240-203ENST00000606878 RPS8P62241 208 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms