RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 SYNE4Q8N205 404 aa16.48■□□□□ 0.23
SHROOM1-207ENST00000606676 ATP5J2-PTCD1G3V325 749 aa16.47■□□□□ 0.23
SHROOM1-207ENST00000606676 NPR1P16066 1061 aa16.47■□□□□ 0.23
SHROOM1-207ENST00000606676 SLC10A5Q5PT55 438 aa16.47■□□□□ 0.23
SHROOM1-207ENST00000606676 C3orf67Q6ZVT6 689 aa16.47■□□□□ 0.23
SHROOM1-207ENST00000606676 G2E3Q7L622 706 aa16.47■□□□□ 0.23
SHROOM1-207ENST00000606676 CNKSR1Q969H4 720 aa16.47■□□□□ 0.23
SHROOM1-207ENST00000606676 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
SHROOM1-207ENST00000606676 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
SHROOM1-207ENST00000606676 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.23
SHROOM1-207ENST00000606676 PRPF40BQ6NWY9 871 aaKnown RBP16.46■□□□□ 0.23
SHROOM1-207ENST00000606676 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
SHROOM1-207ENST00000606676 ZNF428Q96B54 188 aa16.46■□□□□ 0.23
SHROOM1-207ENST00000606676 STK31Q9BXU1 1019 aa16.46■□□□□ 0.23
SHROOM1-207ENST00000606676 ADCY9O60503 1353 aa16.46■□□□□ 0.23
SHROOM1-207ENST00000606676 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.22
SHROOM1-207ENST00000606676 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
SHROOM1-207ENST00000606676 C21orf2O43822 256 aa16.45■□□□□ 0.22
SHROOM1-207ENST00000606676 C7orf43Q8WVR3 580 aa16.45■□□□□ 0.22
SHROOM1-207ENST00000606676 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
SHROOM1-207ENST00000606676 NFKBIEO00221 500 aa16.44■□□□□ 0.22
SHROOM1-207ENST00000606676 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-207ENST00000606676 HOXA10P31260 410 aaPredicted RBP16.44■□□□□ 0.22
SHROOM1-207ENST00000606676 PRELPP51888 382 aa16.44■□□□□ 0.22
SHROOM1-207ENST00000606676 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
SHROOM1-207ENST00000606676 METTL22Q9BUU2 404 aaPredicted RBP16.44■□□□□ 0.22
SHROOM1-207ENST00000606676 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
SHROOM1-207ENST00000606676 PI4KAP2A4QPH2 592 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 E9PSI1 815 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 HCLS1P14317 486 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 RASSF7Q02833 373 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 C9orf131Q5VYM1 1079 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 KSR2Q6VAB6 950 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 PI4KAP1Q8N8J0 262 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 CDCA7LQ96GN5 454 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 MYD88Q99836 296 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 ARFGEF2Q9Y6D5 1785 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 SH3TC1Q8TE82 1336 aa16.43■□□□□ 0.22
SHROOM1-207ENST00000606676 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
SHROOM1-207ENST00000606676 FLIIQ13045 1269 aa16.42■□□□□ 0.22
SHROOM1-207ENST00000606676 TRMT2AQ8IZ69 625 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-207ENST00000606676 FAM89AQ96GI7 184 aa16.42■□□□□ 0.22
SHROOM1-207ENST00000606676 NLRP3Q96P20 1036 aa16.42■□□□□ 0.22
SHROOM1-207ENST00000606676 IGKV5-2P06315 115 aa16.41■□□□□ 0.22
SHROOM1-207ENST00000606676 OLFM4Q6UX06 510 aa16.41■□□□□ 0.22
SHROOM1-207ENST00000606676 RPGRQ92834 1020 aaKnown RBP16.41■□□□□ 0.22
SHROOM1-207ENST00000606676 CCDC191Q8NCU4 936 aa16.4■□□□□ 0.22
SHROOM1-207ENST00000606676 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
SHROOM1-207ENST00000606676 LMNB1P20700 586 aa16.39■□□□□ 0.21
SHROOM1-207ENST00000606676 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
SHROOM1-207ENST00000606676 ZBTB38Q8NAP3 1195 aaPredicted RBP16.39■□□□□ 0.21
SHROOM1-207ENST00000606676 RBM17Q96I25 401 aaKnown RBP16.39■□□□□ 0.21
SHROOM1-207ENST00000606676 RNF181Q9P0P0 153 aa16.39■□□□□ 0.21
SHROOM1-207ENST00000606676 FKBP5Q13451 457 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-207ENST00000606676 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
SHROOM1-207ENST00000606676 SLC51AQ86UW1 340 aa16.38■□□□□ 0.21
SHROOM1-207ENST00000606676 CWC25Q9NXE8 425 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-207ENST00000606676 LTBP3Q9NS15 1303 aa16.38■□□□□ 0.21
SHROOM1-207ENST00000606676 SNED1Q8TER0 1413 aa16.37■□□□□ 0.21
SHROOM1-207ENST00000606676 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
SHROOM1-207ENST00000606676 PCCAP05165 728 aaPredicted RBP16.37■□□□□ 0.21
SHROOM1-207ENST00000606676 CWF19L2Q2TBE0 894 aaKnown RBP16.37■□□□□ 0.21
SHROOM1-207ENST00000606676 CCDC93Q567U6 631 aa16.37■□□□□ 0.21
SHROOM1-207ENST00000606676 ABCC4O15439 1325 aa16.37■□□□□ 0.21
SHROOM1-207ENST00000606676 NEURL1BA8MQ27 555 aa16.36■□□□□ 0.21
SHROOM1-207ENST00000606676 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-207ENST00000606676 ZNF526Q8TF50 670 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-207ENST00000606676 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-207ENST00000606676 TAOK3Q9H2K8 898 aa16.36■□□□□ 0.21
SHROOM1-207ENST00000606676 SBF1O95248 1867 aa16.35■□□□□ 0.21
SHROOM1-207ENST00000606676 CACNA1SQ13698 1873 aa16.35■□□□□ 0.21
SHROOM1-207ENST00000606676 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
SHROOM1-207ENST00000606676 PPEF1O14829 653 aaPredicted RBP16.35■□□□□ 0.21
SHROOM1-207ENST00000606676 NEXNQ0ZGT2 675 aa16.35■□□□□ 0.21
SHROOM1-207ENST00000606676 RTKN2Q8IZC4 609 aa16.35■□□□□ 0.21
SHROOM1-207ENST00000606676 DNAAF4Q8WXU2 420 aa16.35■□□□□ 0.21
SHROOM1-207ENST00000606676 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-207ENST00000606676 F6X3S4 739 aa16.34■□□□□ 0.21
SHROOM1-207ENST00000606676 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
SHROOM1-207ENST00000606676 DDX46Q7L014 1031 aaKnown RBP16.34■□□□□ 0.21
SHROOM1-207ENST00000606676 MRPL50Q8N5N7 158 aaKnown RBP16.34■□□□□ 0.21
SHROOM1-207ENST00000606676 GPBP1L1Q9HC44 474 aaPredicted RBP16.34■□□□□ 0.21
SHROOM1-207ENST00000606676 LAMB2P55268 1798 aa16.33■□□□□ 0.21
SHROOM1-207ENST00000606676 BBOX1O75936 387 aa16.33■□□□□ 0.2
SHROOM1-207ENST00000606676 GCKRQ14397 625 aa16.33■□□□□ 0.2
SHROOM1-207ENST00000606676 CC2D2BQ6DHV5 1058 aa16.33■□□□□ 0.2
SHROOM1-207ENST00000606676 LINS1Q8NG48 757 aa16.33■□□□□ 0.2
SHROOM1-207ENST00000606676 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.2
SHROOM1-207ENST00000606676 ATP6V0A2Q9Y487 856 aa16.33■□□□□ 0.2
SHROOM1-207ENST00000606676 ZC3H4Q9UPT8 1303 aaKnown RBP16.33■□□□□ 0.2
SHROOM1-207ENST00000606676 H7C1W4 665 aa16.32■□□□□ 0.2
SHROOM1-207ENST00000606676 CACNA1FO60840 1977 aa16.32■□□□□ 0.2
SHROOM1-207ENST00000606676 GRAPQ13588 217 aa16.32■□□□□ 0.2
SHROOM1-207ENST00000606676 BEND3Q5T5X7 828 aa16.32■□□□□ 0.2
SHROOM1-207ENST00000606676 GRAPLQ8TC17 118 aaPredicted RBP16.32■□□□□ 0.2
SHROOM1-207ENST00000606676 PSMD1Q99460 953 aa16.32■□□□□ 0.2
SHROOM1-207ENST00000606676 CDHR2Q9BYE9 1310 aa16.32■□□□□ 0.2
SHROOM1-207ENST00000606676 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms