RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 CARMIL2Q6F5E8 1435 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 NUP153P49790 1475 aaKnown RBP8.05□□□□□ -1.12
SNX5-218ENST00000606570 CHD1LQ86WJ1 897 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 SMC5Q8IY18 1101 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 LRRC27Q9C0I9 530 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 UNC45AQ9H3U1 944 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 MAGEC2Q9UBF1 373 aaPredicted RBP8.05□□□□□ -1.12
SNX5-218ENST00000606570 USP25Q9UHP3 1055 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 LRRFIP2Q9Y608 721 aaKnown RBP8.05□□□□□ -1.12
SNX5-218ENST00000606570 ST18O60284 1047 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 KLHL40Q2TBA0 621 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 HSP90B2PQ58FF3 399 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 MYSM1Q5VVJ2 828 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 TMEM110Q86TL2 294 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 CACTIN-AS1Q8N1I8 211 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 PPM1EQ8WY54 764 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 SSH1Q8WYL5 1049 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 DUSP9Q99956 384 aaKnown RBP8.05□□□□□ -1.12
SNX5-218ENST00000606570 SPOCK3Q9BQ16 436 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 SLC12A5Q9H2X9 1139 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 ABCF2Q9UG63 623 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 PLB1Q6P1J6 1458 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 SNUPNO95149 360 aaKnown RBP8.05□□□□□ -1.12
SNX5-218ENST00000606570 TBC1D8BQ0IIM8 1120 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 ARMC2Q8NEN0 867 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 RSPH1Q8WYR4 309 aa8.05□□□□□ -1.12
SNX5-218ENST00000606570 CCDC85AQ96PX6 553 aaPredicted RBP8.05□□□□□ -1.12
SNX5-218ENST00000606570 EXOC5O00471 708 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 IMPDH2P12268 514 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 SESN3P58005 492 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 SF3B2Q13435 895 aaKnown RBP8.04□□□□□ -1.12
SNX5-218ENST00000606570 CLEC4GQ6UXB4 293 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 GBP6Q6ZN66 633 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 TEX11Q8IYF3 940 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 TEKT1Q969V4 418 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 NACA2Q9H009 215 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 KLHL42Q9P2K6 505 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 FMNL1O95466 1100 aaPredicted RBP8.04□□□□□ -1.12
SNX5-218ENST00000606570 VCAM1P19320 739 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 EFCAB13Q8IY85 973 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 DRAXINQ8NBI3 349 aaPredicted RBP8.04□□□□□ -1.12
SNX5-218ENST00000606570 UBA5Q9GZZ9 404 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 SYCE3A1L190 88 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 SASH1O94885 1247 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 PEX19P40855 299 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 SNX1Q13596 522 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 SNX21Q969T3 373 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 UBAP1Q9NZ09 502 aa8.04□□□□□ -1.12
SNX5-218ENST00000606570 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.04□□□□□ -1.12
SNX5-218ENST00000606570 V9GYY5 206 aaPredicted RBP8.04□□□□□ -1.12
SNX5-218ENST00000606570 USP8P40818 1118 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 MAGI2Q86UL8 1455 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 PIK3C2GO75747 1445 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 MYO1BO43795 1136 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 CDC45O75419 566 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 GCKP35557 465 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 ZSCAN23Q3MJ62 389 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 KIAA0825Q8IV33 1275 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 ZNF483Q8TF39 744 aaPredicted RBP8.03□□□□□ -1.12
SNX5-218ENST00000606570 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
SNX5-218ENST00000606570 FBXO9Q9UK97 447 aaPredicted RBP8.03□□□□□ -1.12
SNX5-218ENST00000606570 ASXL1Q8IXJ9 1541 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.03□□□□□ -1.12
SNX5-218ENST00000606570 KCNA2P16389 499 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 SYNE3Q6ZMZ3 975 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 SYAP1Q96A49 352 aaPredicted RBP8.03□□□□□ -1.12
SNX5-218ENST00000606570 ST7Q9NRC1 585 aa8.03□□□□□ -1.12
SNX5-218ENST00000606570 BDNFP23560 247 aa8.02□□□□□ -1.12
SNX5-218ENST00000606570 PRIM1P49642 420 aaKnown RBP8.02□□□□□ -1.12
SNX5-218ENST00000606570 KCNV1Q6PIU1 500 aa8.02□□□□□ -1.12
SNX5-218ENST00000606570 ANKRD18AQ8IVF6 992 aa8.02□□□□□ -1.12
SNX5-218ENST00000606570 NEK9Q8TD19 979 aa8.02□□□□□ -1.12
SNX5-218ENST00000606570 PLEKHG4BQ96PX9 1271 aa8.02□□□□□ -1.12
SNX5-218ENST00000606570 LMCD1Q9NZU5 365 aa8.02□□□□□ -1.12
SNX5-218ENST00000606570 THRAP3Q9Y2W1 955 aaKnown RBP8.02□□□□□ -1.12
SNX5-218ENST00000606570 GPRASP1Q5JY77 1395 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 HMMRO75330 724 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 RANBP1P43487 201 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 GJA8P48165 433 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 TBC1D9Q6ZT07 1266 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 RETREG2Q8NC44 543 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 NFATC2IPQ8NCF5 419 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 ATG3Q9NT62 314 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 GABBR1Q9UBS5 961 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 A2MP01023 1474 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 CCNHP51946 323 aaPredicted RBP8.02□□□□□ -1.13
SNX5-218ENST00000606570 MEX3CQ5U5Q3 659 aaKnown RBP8.02□□□□□ -1.13
SNX5-218ENST00000606570 LEKR1Q6ZMV7 388 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 CCDC47Q96A33 483 aaKnown RBP8.02□□□□□ -1.13
SNX5-218ENST00000606570 CENPOQ9BU64 300 aa8.02□□□□□ -1.13
SNX5-218ENST00000606570 GNL3LQ9NVN8 582 aaKnown RBP8.02□□□□□ -1.13
SNX5-218ENST00000606570 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNX5-218ENST00000606570 SYNJ2O15056 1496 aa8.01□□□□□ -1.13
SNX5-218ENST00000606570 PDE6BP35913 854 aa8.01□□□□□ -1.13
SNX5-218ENST00000606570 CDR1P51861 262 aa8.01□□□□□ -1.13
SNX5-218ENST00000606570 USP4Q13107 963 aa8.01□□□□□ -1.13
SNX5-218ENST00000606570 MTRQ99707 1265 aa8.01□□□□□ -1.13
SNX5-218ENST00000606570 CARD14Q9BXL6 1004 aa8.01□□□□□ -1.13
SNX5-218ENST00000606570 RBSNQ9H1K0 784 aa8.01□□□□□ -1.13
SNX5-218ENST00000606570 HMGB1P1B2RPK0 211 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms