RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ISCA1Q9BUE6 129 aa18.18■□□□□ 0.5
CTSA-211ENST00000606066 UTP14AQ9BVJ6 771 aaKnown RBP18.18■□□□□ 0.5
CTSA-211ENST00000606066 BRIP1Q9BX63 1249 aa18.18■□□□□ 0.5
CTSA-211ENST00000606066 SMC4Q9NTJ3 1288 aa18.18■□□□□ 0.5
CTSA-211ENST00000606066 PDZRN3Q9UPQ7 1066 aa18.18■□□□□ 0.5
CTSA-211ENST00000606066 UBN2Q6ZU65 1347 aa18.18■□□□□ 0.5
CTSA-211ENST00000606066 IBTKQ9P2D0 1353 aaPredicted RBP18.17■□□□□ 0.5
CTSA-211ENST00000606066 PDE6BP35913 854 aa18.17■□□□□ 0.5
CTSA-211ENST00000606066 MYD88Q99836 296 aa18.17■□□□□ 0.5
CTSA-211ENST00000606066 PIM2Q9P1W9 311 aa18.17■□□□□ 0.5
CTSA-211ENST00000606066 RNF123Q5XPI4 1314 aa18.17■□□□□ 0.5
CTSA-211ENST00000606066 ATP5J2-PTCD1G3V325 749 aa18.16■□□□□ 0.5
CTSA-211ENST00000606066 DNAAF4Q8WXU2 420 aa18.16■□□□□ 0.5
CTSA-211ENST00000606066 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
CTSA-211ENST00000606066 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
CTSA-211ENST00000606066 PTPRCP08575 1304 aa18.16■□□□□ 0.5
CTSA-211ENST00000606066 RARSP54136 660 aaKnown RBP18.15■□□□□ 0.5
CTSA-211ENST00000606066 CCDC191Q8NCU4 936 aa18.15■□□□□ 0.5
CTSA-211ENST00000606066 TRMT112Q9UI30 125 aaKnown RBP18.15■□□□□ 0.5
CTSA-211ENST00000606066 NTSR2O95665 410 aa18.14■□□□□ 0.49
CTSA-211ENST00000606066 BRPF1P55201 1214 aaPredicted RBP18.14■□□□□ 0.49
CTSA-211ENST00000606066 C9orf131Q5VYM1 1079 aa18.14■□□□□ 0.49
CTSA-211ENST00000606066 RBM46Q8TBY0 533 aaKnown RBP18.14■□□□□ 0.49
CTSA-211ENST00000606066 CWC25Q9NXE8 425 aaPredicted RBP18.14■□□□□ 0.49
CTSA-211ENST00000606066 H0YIN7 160 aa18.13■□□□□ 0.49
CTSA-211ENST00000606066 ERFEQ4G0M1 354 aa18.13■□□□□ 0.49
CTSA-211ENST00000606066 DALRD3Q5D0E6 543 aaKnown RBP18.13■□□□□ 0.49
CTSA-211ENST00000606066 NUTM1Q86Y26 1132 aa18.13■□□□□ 0.49
CTSA-211ENST00000606066 CCDC24Q8N4L8 307 aa18.13■□□□□ 0.49
CTSA-211ENST00000606066 NMRK2Q9NPI5 230 aa18.13■□□□□ 0.49
CTSA-211ENST00000606066 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
CTSA-211ENST00000606066 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
CTSA-211ENST00000606066 NUP98P52948 1817 aa18.12■□□□□ 0.49
CTSA-211ENST00000606066 HSP90B1P14625 803 aaKnown RBP18.12■□□□□ 0.49
CTSA-211ENST00000606066 C2CD5Q86YS7 1000 aa18.12■□□□□ 0.49
CTSA-211ENST00000606066 LINS1Q8NG48 757 aa18.12■□□□□ 0.49
CTSA-211ENST00000606066 FSTL1Q12841 308 aa18.11■□□□□ 0.49
CTSA-211ENST00000606066 SLC10A5Q5PT55 438 aa18.11■□□□□ 0.49
CTSA-211ENST00000606066 ZBTB38Q8NAP3 1195 aaPredicted RBP18.11■□□□□ 0.49
CTSA-211ENST00000606066 NOB1Q9ULX3 412 aaKnown RBP18.11■□□□□ 0.49
CTSA-211ENST00000606066 KIF16BQ96L93 1317 aa18.11■□□□□ 0.49
CTSA-211ENST00000606066 NEURL1BA8MQ27 555 aa18.1■□□□□ 0.49
CTSA-211ENST00000606066 F6X3S4 739 aa18.1■□□□□ 0.49
CTSA-211ENST00000606066 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
CTSA-211ENST00000606066 IGKV5-2P06315 115 aa18.1■□□□□ 0.49
CTSA-211ENST00000606066 CHRNA5P30532 468 aa18.1■□□□□ 0.49
CTSA-211ENST00000606066 SLC4A10Q6U841 1118 aa18.1■□□□□ 0.49
CTSA-211ENST00000606066 NLRP3Q96P20 1036 aa18.1■□□□□ 0.49
CTSA-211ENST00000606066 API5Q9BZZ5 524 aaKnown RBP18.1■□□□□ 0.49
CTSA-211ENST00000606066 KLRG2A4D1S0 409 aaPredicted RBP18.09■□□□□ 0.49
CTSA-211ENST00000606066 CWF19L2Q2TBE0 894 aaKnown RBP18.09■□□□□ 0.49
CTSA-211ENST00000606066 ARHGAP45Q92619 1136 aa18.09■□□□□ 0.49
CTSA-211ENST00000606066 FAM89AQ96GI7 184 aa18.09■□□□□ 0.49
CTSA-211ENST00000606066 CACNA1FO60840 1977 aa18.09■□□□□ 0.49
CTSA-211ENST00000606066 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.49
CTSA-211ENST00000606066 ABCC12Q96J65 1359 aa18.08■□□□□ 0.49
CTSA-211ENST00000606066 KDM2BQ8NHM5 1336 aa18.08■□□□□ 0.49
CTSA-211ENST00000606066 AFDNP55196 1824 aaKnown RBP18.08■□□□□ 0.48
CTSA-211ENST00000606066 PCCAP05165 728 aaPredicted RBP18.08■□□□□ 0.48
CTSA-211ENST00000606066 BEND3Q5T5X7 828 aa18.08■□□□□ 0.48
CTSA-211ENST00000606066 ZNF622Q969S3 477 aaKnown RBP eCLIP18.08■□□□□ 0.48
CTSA-211ENST00000606066 MASTLQ96GX5 879 aa18.08■□□□□ 0.48
CTSA-211ENST00000606066 ARFGEF2Q9Y6D5 1785 aa18.08■□□□□ 0.48
CTSA-211ENST00000606066 BCAR3O75815 825 aa18.07■□□□□ 0.48
CTSA-211ENST00000606066 ALDH1L1O75891 902 aa18.07■□□□□ 0.48
CTSA-211ENST00000606066 SRGNP10124 158 aa18.07■□□□□ 0.48
CTSA-211ENST00000606066 NPR1P16066 1061 aa18.07■□□□□ 0.48
CTSA-211ENST00000606066 GCKRQ14397 625 aa18.07■□□□□ 0.48
CTSA-211ENST00000606066 STYK1Q6J9G0 422 aa18.07■□□□□ 0.48
CTSA-211ENST00000606066 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
CTSA-211ENST00000606066 SRCIN1Q9C0H9 1055 aa18.07■□□□□ 0.48
CTSA-211ENST00000606066 KIF13BQ9NQT8 1826 aa18.07■□□□□ 0.48
CTSA-211ENST00000606066 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
CTSA-211ENST00000606066 HCLS1P14317 486 aaPredicted RBP18.06■□□□□ 0.48
CTSA-211ENST00000606066 CRY2Q49AN0 593 aa18.06■□□□□ 0.48
CTSA-211ENST00000606066 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
CTSA-211ENST00000606066 CNKSR1Q969H4 720 aa18.06■□□□□ 0.48
CTSA-211ENST00000606066 ANKRD36CQ5JPF3 1778 aa18.06■□□□□ 0.48
CTSA-211ENST00000606066 ALDH1B1P30837 517 aa18.05■□□□□ 0.48
CTSA-211ENST00000606066 SYNE4Q8N205 404 aa18.05■□□□□ 0.48
CTSA-211ENST00000606066 TTLL6Q8N841 843 aa18.05■□□□□ 0.48
CTSA-211ENST00000606066 JMYQ8N9B5 988 aa18.05■□□□□ 0.48
CTSA-211ENST00000606066 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
CTSA-211ENST00000606066 FRAT1Q92837 279 aaPredicted RBP18.05■□□□□ 0.48
CTSA-211ENST00000606066 RNF181Q9P0P0 153 aa18.05■□□□□ 0.48
CTSA-211ENST00000606066 CDHR2Q9BYE9 1310 aa18.04■□□□□ 0.48
CTSA-211ENST00000606066 ZC3H4Q9UPT8 1303 aaKnown RBP18.04■□□□□ 0.48
CTSA-211ENST00000606066 H7C1W4 665 aa18.04■□□□□ 0.48
CTSA-211ENST00000606066 CCT4P50991 539 aaKnown RBP18.04■□□□□ 0.48
CTSA-211ENST00000606066 KLRG1Q96E93 195 aa18.04■□□□□ 0.48
CTSA-211ENST00000606066 RBM17Q96I25 401 aaKnown RBP18.04■□□□□ 0.48
CTSA-211ENST00000606066 RRAGCQ9HB90 399 aa18.04■□□□□ 0.48
CTSA-211ENST00000606066 PDE8AO60658 829 aa18.03■□□□□ 0.48
CTSA-211ENST00000606066 ZKSCAN2Q63HK3 967 aa18.03■□□□□ 0.48
CTSA-211ENST00000606066 ATF7IPQ6VMQ6 1270 aa18.03■□□□□ 0.48
CTSA-211ENST00000606066 C9orf78Q9NZ63 289 aaPredicted RBP18.03■□□□□ 0.48
CTSA-211ENST00000606066 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
CTSA-211ENST00000606066 HOXA10P31260 410 aaPredicted RBP18.02■□□□□ 0.48
CTSA-211ENST00000606066 UBE3BQ7Z3V4 1068 aa18.02■□□□□ 0.48
CTSA-211ENST00000606066 KIAA1551Q9HCM1 1747 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms