RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.62■■□□□ 1.37
TUBB4B-202ENST00000604929 SASH1O94885 1247 aa23.61■■□□□ 1.37
TUBB4B-202ENST00000604929 EIF5P55010 431 aaKnown RBP23.61■■□□□ 1.37
TUBB4B-202ENST00000604929 ONECUT3O60422 494 aaPredicted RBP23.6■■□□□ 1.37
TUBB4B-202ENST00000604929 CDC45O75419 566 aa23.6■■□□□ 1.37
TUBB4B-202ENST00000604929 TRIM28Q13263 835 aaKnown RBP23.6■■□□□ 1.37
TUBB4B-202ENST00000604929 CLASRPQ8N2M8 674 aaKnown RBP23.6■■□□□ 1.37
TUBB4B-202ENST00000604929 RFX5P48382 616 aaPredicted RBP23.59■■□□□ 1.37
TUBB4B-202ENST00000604929 PTPN12Q05209 780 aaKnown RBP23.59■■□□□ 1.37
TUBB4B-202ENST00000604929 ERC1Q8IUD2 1116 aa23.59■■□□□ 1.37
TUBB4B-202ENST00000604929 SYNE4Q8N205 404 aa23.59■■□□□ 1.37
TUBB4B-202ENST00000604929 TBC1D32Q96NH3 1257 aa23.59■■□□□ 1.37
TUBB4B-202ENST00000604929 STAP2Q9UGK3 403 aa23.59■■□□□ 1.37
TUBB4B-202ENST00000604929 ATRNO75882 1429 aa23.59■■□□□ 1.37
TUBB4B-202ENST00000604929 THSD7AQ9UPZ6 1657 aa23.58■■□□□ 1.37
TUBB4B-202ENST00000604929 C22orf23Q9BZE7 217 aa23.58■■□□□ 1.37
TUBB4B-202ENST00000604929 TRIM6-TRIM34B2RNG4 842 aa23.57■■□□□ 1.36
TUBB4B-202ENST00000604929 NLRP10Q86W26 655 aa23.57■■□□□ 1.36
TUBB4B-202ENST00000604929 COL15A1P39059 1388 aa23.57■■□□□ 1.36
TUBB4B-202ENST00000604929 HSP90AB3PQ58FF7 597 aa23.57■■□□□ 1.36
TUBB4B-202ENST00000604929 LINC00116Q8NCU8 138 aa23.57■■□□□ 1.36
TUBB4B-202ENST00000604929 RILPL2Q969X0 211 aa23.57■■□□□ 1.36
TUBB4B-202ENST00000604929 COPRSQ9NQ92 184 aa23.57■■□□□ 1.36
TUBB4B-202ENST00000604929 ERVV-1B6SEH8 477 aa23.56■■□□□ 1.36
TUBB4B-202ENST00000604929 EP400Q96L91 3159 aa23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 MAP4K4O95819 1239 aaPredicted RBP23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 SLC4A3P48751 1232 aa23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 AACSQ86V21 672 aa23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 ZBTB38Q8NAP3 1195 aaPredicted RBP23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 CCDC85AQ96PX6 553 aaPredicted RBP23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 PCCAP05165 728 aaPredicted RBP23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 IFIT2P09913 472 aaKnown RBP23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 DDRGK1Q96HY6 314 aa23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 CCDC8Q9H0W5 538 aaPredicted RBP23.55■■□□□ 1.36
TUBB4B-202ENST00000604929 MYH14Q7Z406 1995 aaKnown RBP23.54■■□□□ 1.36
TUBB4B-202ENST00000604929 SMIM5Q71RC9 77 aa23.54■■□□□ 1.36
TUBB4B-202ENST00000604929 EAF2Q96CJ1 260 aaPredicted RBP23.54■■□□□ 1.36
TUBB4B-202ENST00000604929 TRMT112Q9UI30 125 aaKnown RBP23.54■■□□□ 1.36
TUBB4B-202ENST00000604929 PI4K2BQ8TCG2 481 aa23.53■■□□□ 1.36
TUBB4B-202ENST00000604929 ZNF594Q96JF6 807 aaPredicted RBP23.53■■□□□ 1.36
TUBB4B-202ENST00000604929 FAM177BA6PVY3 158 aa23.52■■□□□ 1.36
TUBB4B-202ENST00000604929 TFCP2Q12800 502 aa23.52■■□□□ 1.36
TUBB4B-202ENST00000604929 UBN2Q6ZU65 1347 aa23.51■■□□□ 1.35
TUBB4B-202ENST00000604929 CASC1Q6TDU7 716 aa23.51■■□□□ 1.35
TUBB4B-202ENST00000604929 ZNF34Q8IZ26 560 aa23.51■■□□□ 1.35
TUBB4B-202ENST00000604929 CAMTA2O94983 1202 aa23.5■■□□□ 1.35
TUBB4B-202ENST00000604929 NUP98P52948 1817 aa23.5■■□□□ 1.35
TUBB4B-202ENST00000604929 TLR7Q9NYK1 1049 aaKnown RBP23.5■■□□□ 1.35
TUBB4B-202ENST00000604929 CCNL1Q9UK58 526 aaPredicted RBP23.5■■□□□ 1.35
TUBB4B-202ENST00000604929 AOX1Q06278 1338 aa23.5■■□□□ 1.35
TUBB4B-202ENST00000604929 ECHDC1Q9NTX5 307 aa23.49■■□□□ 1.35
TUBB4B-202ENST00000604929 IRS4O14654 1257 aaPredicted RBP23.48■■□□□ 1.35
TUBB4B-202ENST00000604929 CCDC57Q2TAC2 916 aa23.48■■□□□ 1.35
TUBB4B-202ENST00000604929 SUSD4Q5VX71 490 aa23.48■■□□□ 1.35
TUBB4B-202ENST00000604929 BTAF1O14981 1849 aa23.48■■□□□ 1.35
TUBB4B-202ENST00000604929 LRRC24Q50LG9 513 aa23.47■■□□□ 1.35
TUBB4B-202ENST00000604929 ERICH6Q7L0X2 663 aa23.47■■□□□ 1.35
TUBB4B-202ENST00000604929 DAXXQ9UER7 740 aaPredicted RBP23.47■■□□□ 1.35
TUBB4B-202ENST00000604929 TTC41PQ6P2S7 1318 aa23.47■■□□□ 1.35
TUBB4B-202ENST00000604929 PUS3Q9BZE2 481 aaKnown RBP23.47■■□□□ 1.35
TUBB4B-202ENST00000604929 ERC2O15083 957 aa23.46■■□□□ 1.35
TUBB4B-202ENST00000604929 GLRX3O76003 335 aaKnown RBP23.46■■□□□ 1.35
TUBB4B-202ENST00000604929 ATG9AQ7Z3C6 839 aa23.46■■□□□ 1.35
TUBB4B-202ENST00000604929 GPATCH3Q96I76 525 aa23.46■■□□□ 1.35
TUBB4B-202ENST00000604929 PLA2G12BQ9BX93 195 aa23.46■■□□□ 1.35
TUBB4B-202ENST00000604929 NIP7Q9Y221 180 aaKnown RBP eCLIP23.46■■□□□ 1.353e-6■■■■■ 33.7
TUBB4B-202ENST00000604929 CSF1RP07333 972 aa23.45■■□□□ 1.35
TUBB4B-202ENST00000604929 KRT27Q7Z3Y8 459 aa23.45■■□□□ 1.35
TUBB4B-202ENST00000604929 USP42Q9H9J4 1324 aaKnown RBP23.45■■□□□ 1.35
TUBB4B-202ENST00000604929 TNNI3KQ59H18 835 aa23.45■■□□□ 1.34
TUBB4B-202ENST00000604929 FPGT-TNNI3KV9GXZ4 949 aa23.45■■□□□ 1.34
TUBB4B-202ENST00000604929 CDHR2Q9BYE9 1310 aa23.45■■□□□ 1.34
TUBB4B-202ENST00000604929 CHMLP26374 656 aa23.44■■□□□ 1.34
TUBB4B-202ENST00000604929 RBM25P49756 843 aaKnown RBP23.44■■□□□ 1.34
TUBB4B-202ENST00000604929 TTLL11Q8NHH1 800 aa23.44■■□□□ 1.34
TUBB4B-202ENST00000604929 BCL11BQ9C0K0 894 aaPredicted RBP23.44■■□□□ 1.34
TUBB4B-202ENST00000604929 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
TUBB4B-202ENST00000604929 EYA2O00167 538 aa23.43■■□□□ 1.34
TUBB4B-202ENST00000604929 IFIT5Q13325 482 aaKnown RBP23.43■■□□□ 1.34
TUBB4B-202ENST00000604929 CNTNAP4Q9C0A0 1308 aa23.43■■□□□ 1.34
TUBB4B-202ENST00000604929 GNPATO15228 680 aa23.43■■□□□ 1.34
TUBB4B-202ENST00000604929 HCLS1P14317 486 aaPredicted RBP23.43■■□□□ 1.34
TUBB4B-202ENST00000604929 TAF7LQ5H9L4 462 aa23.43■■□□□ 1.34
TUBB4B-202ENST00000604929 GREM2Q9H772 168 aa23.43■■□□□ 1.34
TUBB4B-202ENST00000604929 COL5A3P25940 1745 aaPredicted RBP23.43■■□□□ 1.34
TUBB4B-202ENST00000604929 IL15P40933 162 aaPredicted RBP23.42■■□□□ 1.34
TUBB4B-202ENST00000604929 CNTROBQ8N137 903 aa23.42■■□□□ 1.34
TUBB4B-202ENST00000604929 UTP14AQ9BVJ6 771 aaKnown RBP23.42■■□□□ 1.34
TUBB4B-202ENST00000604929 BOLA2Q9H3K6 86 aa23.42■■□□□ 1.34
TUBB4B-202ENST00000604929 DBNLQ9UJU6 430 aaKnown RBP23.42■■□□□ 1.34
TUBB4B-202ENST00000604929 CTSWP56202 376 aa23.42■■□□□ 1.34
TUBB4B-202ENST00000604929 NEUROD6Q96NK8 337 aa23.42■■□□□ 1.34
TUBB4B-202ENST00000604929 USP26Q9BXU7 913 aa23.42■■□□□ 1.34
TUBB4B-202ENST00000604929 ANKRD36CQ5JPF3 1778 aa23.41■■□□□ 1.34
TUBB4B-202ENST00000604929 RREB1Q92766 1687 aa23.41■■□□□ 1.34
TUBB4B-202ENST00000604929 CICQ96RK0 1608 aaPredicted RBP23.41■■□□□ 1.34
TUBB4B-202ENST00000604929 PDE8AO60658 829 aa23.41■■□□□ 1.34
TUBB4B-202ENST00000604929 TRIM37O94972 964 aa23.41■■□□□ 1.34
TUBB4B-202ENST00000604929 ITGA6P23229 1130 aa23.41■■□□□ 1.34
TUBB4B-202ENST00000604929 TIMM10P62072 90 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms