RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 KCNQ4P56696 695 aa8.77□□□□□ -1.01
UBE2E3-212ENST00000602888 NOM1Q5C9Z4 860 aaKnown RBP8.77□□□□□ -1.01
UBE2E3-212ENST00000602888 ALKBH2Q6NS38 261 aa8.77□□□□□ -1.01
UBE2E3-212ENST00000602888 FAM13BQ9NYF5 915 aa8.77□□□□□ -1.01
UBE2E3-212ENST00000602888 MARK1Q9P0L2 795 aa8.77□□□□□ -1.01
UBE2E3-212ENST00000602888 OPLAHO14841 1288 aa8.76□□□□□ -1.01
UBE2E3-212ENST00000602888 MX2P20592 715 aa8.76□□□□□ -1.01
UBE2E3-212ENST00000602888 SFSWAPQ12872 951 aaKnown RBP8.76□□□□□ -1.01
UBE2E3-212ENST00000602888 LCE2CQ5TA81 110 aa8.76□□□□□ -1.01
UBE2E3-212ENST00000602888 STRN4Q9NRL3 753 aa8.76□□□□□ -1.01
UBE2E3-212ENST00000602888 KCNH4Q9UQ05 1017 aa8.76□□□□□ -1.01
UBE2E3-212ENST00000602888 GMPRP36959 345 aa8.75□□□□□ -1.01
UBE2E3-212ENST00000602888 RNFT1Q5M7Z0 435 aa8.75□□□□□ -1.01
UBE2E3-212ENST00000602888 FAM182BQ5T319 152 aa8.75□□□□□ -1.01
UBE2E3-212ENST00000602888 ATCAYQ86WG3 371 aa8.75□□□□□ -1.01
UBE2E3-212ENST00000602888 RGL4Q8IZJ4 473 aa8.75□□□□□ -1.01
UBE2E3-212ENST00000602888 MBIPQ9NS73 344 aa8.75□□□□□ -1.01
UBE2E3-212ENST00000602888 HCN2Q9UL51 889 aa8.75□□□□□ -1.01
UBE2E3-212ENST00000602888 CTBSQ01459 385 aa8.74□□□□□ -1.01
UBE2E3-212ENST00000602888 AAMPQ13685 434 aa8.74□□□□□ -1.01
UBE2E3-212ENST00000602888 PIK3R5Q8WYR1 880 aa8.74□□□□□ -1.01
UBE2E3-212ENST00000602888 NSFL1CQ9UNZ2 370 aaKnown RBP8.74□□□□□ -1.01
UBE2E3-212ENST00000602888 RTCBQ9Y3I0 505 aaKnown RBP8.74□□□□□ -1.01
UBE2E3-212ENST00000602888 ZBTB7CA1YPR0 619 aa8.73□□□□□ -1.01
UBE2E3-212ENST00000602888 BMP4P12644 408 aa8.73□□□□□ -1.01
UBE2E3-212ENST00000602888 KRT76Q01546 638 aa8.73□□□□□ -1.01
UBE2E3-212ENST00000602888 GPR152Q8TDT2 470 aa8.73□□□□□ -1.01
UBE2E3-212ENST00000602888 BIN2Q9UBW5 565 aaPredicted RBP8.73□□□□□ -1.01
UBE2E3-212ENST00000602888 USP20Q9Y2K6 914 aa8.73□□□□□ -1.01
UBE2E3-212ENST00000602888 GRNP28799 593 aaKnown RBP8.72□□□□□ -1.01
UBE2E3-212ENST00000602888 ARHGAP4P98171 946 aa8.72□□□□□ -1.01
UBE2E3-212ENST00000602888 ECM1Q16610 540 aa8.72□□□□□ -1.01
UBE2E3-212ENST00000602888 LCE2AQ5TA79 106 aaPredicted RBP8.72□□□□□ -1.01
UBE2E3-212ENST00000602888 CMTR1Q8N1G2 835 aaKnown RBP8.72□□□□□ -1.01
UBE2E3-212ENST00000602888 CNTNAP3BQ96NU0 1288 aa8.72□□□□□ -1.01
UBE2E3-212ENST00000602888 CNTNAP3Q9BZ76 1288 aa8.72□□□□□ -1.01
UBE2E3-212ENST00000602888 PCSK2P16519 638 aa8.71□□□□□ -1.02
UBE2E3-212ENST00000602888 MAP2K3P46734 347 aa8.71□□□□□ -1.02
UBE2E3-212ENST00000602888 DNM1Q05193 864 aaKnown RBP8.71□□□□□ -1.02
UBE2E3-212ENST00000602888 SPEM2Q0P670 501 aa8.71□□□□□ -1.02
UBE2E3-212ENST00000602888 GRIN2CQ14957 1233 aa8.71□□□□□ -1.02
UBE2E3-212ENST00000602888 EDEM1Q92611 657 aa8.71□□□□□ -1.02
UBE2E3-212ENST00000602888 C11orf16Q9NQ32 467 aa8.71□□□□□ -1.02
UBE2E3-212ENST00000602888 PRR12Q9ULL5 1215 aa8.71□□□□□ -1.02
UBE2E3-212ENST00000602888 IGF1RP08069 1367 aa8.71□□□□□ -1.02
UBE2E3-212ENST00000602888 C2CD2LO14523 706 aa8.7□□□□□ -1.02
UBE2E3-212ENST00000602888 FZD6O60353 706 aa8.7□□□□□ -1.02
UBE2E3-212ENST00000602888 MZF1P28698 734 aaPredicted RBP8.7□□□□□ -1.02
UBE2E3-212ENST00000602888 SRSF11Q05519 484 aaKnown RBP8.7□□□□□ -1.02
UBE2E3-212ENST00000602888 SND1Q7KZF4 910 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBE2E3-212ENST00000602888 NUDT16Q96DE0 195 aaKnown RBP8.7□□□□□ -1.02
UBE2E3-212ENST00000602888 SLC30A3Q99726 388 aa8.7□□□□□ -1.02
UBE2E3-212ENST00000602888 KCNMB2Q9Y691 235 aa8.7□□□□□ -1.02
UBE2E3-212ENST00000602888 XYLBO75191 536 aa8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 PDGFAP04085 211 aa8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 RPLP1P05386 114 aaKnown RBP8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 NEUROD1Q13562 356 aa8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 CCINQ13939 588 aa8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 TRIP4Q15650 581 aaPredicted RBP8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 GSX2Q9BZM3 304 aa8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 CCDC87Q9NVE4 849 aa8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 BRPF3Q9ULD4 1205 aa8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 POLIQ9UNA4 740 aa8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 FNDC3AQ9Y2H6 1198 aaKnown RBP8.69□□□□□ -1.02
UBE2E3-212ENST00000602888 UBAP1LF5GYI3 381 aa8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 NDUFB5O43674 189 aa8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 ADAMTS2O95450 1211 aa8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 EGFRP00533 1210 aa8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 USP5P45974 858 aa8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 ZNF468Q5VIY5 522 aaPredicted RBP8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 TTC16Q8NEE8 873 aa8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 PNMA5Q96PV4 448 aa8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 GZF1Q9H116 711 aaPredicted RBP8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 EFCC1Q9HA90 598 aa8.68□□□□□ -1.02
UBE2E3-212ENST00000602888 ARAFP10398 606 aa8.67□□□□□ -1.02
UBE2E3-212ENST00000602888 RAB44Q7Z6P3 723 aaPredicted RBP8.67□□□□□ -1.02
UBE2E3-212ENST00000602888 BHMTQ93088 406 aa8.67□□□□□ -1.02
UBE2E3-212ENST00000602888 AVENQ9NQS1 362 aaPredicted RBP8.67□□□□□ -1.02
UBE2E3-212ENST00000602888 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.66□□□□□ -1.02
UBE2E3-212ENST00000602888 SASH3O75995 380 aa8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 SLURP2P0DP57 97 aa8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 NFKB1P19838 968 aa8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 ADH6P28332 368 aa8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 C8orf34Q49A92 452 aa8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 KRT25Q7Z3Z0 450 aa8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 SYT9Q86SS6 491 aa8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 GJD3Q8N144 294 aa8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 OXCT2Q9BYC2 517 aaPredicted RBP8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 DCTN4Q9UJW0 460 aa8.65□□□□□ -1.02
UBE2E3-212ENST00000602888 WIPF1O43516 503 aa8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 PCBP4P57723 403 aaKnown RBP8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 EHHADHQ08426 723 aa8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 TRIM26Q12899 539 aaPredicted RBP8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 PDE12Q6L8Q7 609 aaKnown RBP8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 NLRP13Q86W25 1043 aa8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 GOLGA6L1Q8N7Z2 621 aa8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 CITED4Q96RK1 184 aa8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 GGNBP2Q9H3C7 697 aa8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 GDF2Q9UK05 429 aaPredicted RBP8.64□□□□□ -1.03
UBE2E3-212ENST00000602888 NEURL1BA8MQ27 555 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms