RNA–Protein interactions for RNA: ENST00000602868.1

SFXN2-213, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-213ENST00000602868 TIAM2Q8IVF5 1701 aa16.6■□□□□ 0.25
SFXN2-213ENST00000602868 POTECB2RU33 542 aa16.6■□□□□ 0.25
SFXN2-213ENST00000602868 L3MBTL3Q96JM7 780 aaPredicted RBP16.6■□□□□ 0.25
SFXN2-213ENST00000602868 NYXQ9GZU5 481 aa16.6■□□□□ 0.25
SFXN2-213ENST00000602868 CHPF2Q9P2E5 772 aa16.6■□□□□ 0.25
SFXN2-213ENST00000602868 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
SFXN2-213ENST00000602868 HTRA3P83110 453 aa16.59■□□□□ 0.25
SFXN2-213ENST00000602868 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
SFXN2-213ENST00000602868 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
SFXN2-213ENST00000602868 TSPYL6Q8N831 410 aa16.59■□□□□ 0.25
SFXN2-213ENST00000602868 XAGE3Q8WTP9 111 aa16.59■□□□□ 0.25
SFXN2-213ENST00000602868 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
SFXN2-213ENST00000602868 ANKRD31Q8N7Z5 1873 aa16.59■□□□□ 0.25
SFXN2-213ENST00000602868 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
SFXN2-213ENST00000602868 GTF2E1P29083 439 aaPredicted RBP16.58■□□□□ 0.24
SFXN2-213ENST00000602868 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
SFXN2-213ENST00000602868 GOLGA2Q08379 1002 aa16.58■□□□□ 0.24
SFXN2-213ENST00000602868 ANKRD13DQ6ZTN6 518 aa16.58■□□□□ 0.24
SFXN2-213ENST00000602868 LDHDQ86WU2 507 aa16.58■□□□□ 0.24
SFXN2-213ENST00000602868 MIER1Q8N108 512 aa16.58■□□□□ 0.24
SFXN2-213ENST00000602868 PLBD2Q8NHP8 589 aa16.58■□□□□ 0.24
SFXN2-213ENST00000602868 C7orf43Q8WVR3 580 aa16.58■□□□□ 0.24
SFXN2-213ENST00000602868 NECTIN2Q92692 538 aa16.58■□□□□ 0.24
SFXN2-213ENST00000602868 TSR2Q969E8 191 aaKnown RBP16.58■□□□□ 0.24
SFXN2-213ENST00000602868 MYH16Q9H6N6 1097 aa16.58■□□□□ 0.24
SFXN2-213ENST00000602868 SALL2Q9Y467 1007 aaPredicted RBP16.58■□□□□ 0.24
SFXN2-213ENST00000602868 ANXA1P04083 346 aa16.57■□□□□ 0.24
SFXN2-213ENST00000602868 TCIRG1Q13488 830 aa16.57■□□□□ 0.24
SFXN2-213ENST00000602868 PARP10Q53GL7 1025 aa16.57■□□□□ 0.24
SFXN2-213ENST00000602868 HSP90AB3PQ58FF7 597 aa16.57■□□□□ 0.24
SFXN2-213ENST00000602868 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
SFXN2-213ENST00000602868 TNS4Q8IZW8 715 aa16.57■□□□□ 0.24
SFXN2-213ENST00000602868 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
SFXN2-213ENST00000602868 VAMP4O75379 141 aa16.56■□□□□ 0.24
SFXN2-213ENST00000602868 TRIM28Q13263 835 aaKnown RBP16.56■□□□□ 0.24
SFXN2-213ENST00000602868 TWISTNBQ3B726 338 aaPredicted RBP16.56■□□□□ 0.24
SFXN2-213ENST00000602868 COL13A1Q5TAT6 717 aaPredicted RBP16.56■□□□□ 0.24
SFXN2-213ENST00000602868 ZBTB3Q9H5J0 574 aa16.56■□□□□ 0.24
SFXN2-213ENST00000602868 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
SFXN2-213ENST00000602868 BCORQ6W2J9 1755 aa16.56■□□□□ 0.24
SFXN2-213ENST00000602868 ARFGEF2Q9Y6D5 1785 aa16.56■□□□□ 0.24
SFXN2-213ENST00000602868 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
SFXN2-213ENST00000602868 DDNO94850 711 aaPredicted RBP16.55■□□□□ 0.24
SFXN2-213ENST00000602868 HSPA1AP0DMV8 641 aaKnown RBP16.55■□□□□ 0.24
SFXN2-213ENST00000602868 HSPA1BP0DMV9 641 aaKnown RBP16.55■□□□□ 0.24
SFXN2-213ENST00000602868 AIMP1Q12904 312 aaKnown RBP16.55■□□□□ 0.24
SFXN2-213ENST00000602868 SLC10A5Q5PT55 438 aa16.55■□□□□ 0.24
SFXN2-213ENST00000602868 SCN4AP35499 1836 aa16.54■□□□□ 0.24
SFXN2-213ENST00000602868 PPP1R42Q7Z4L9 355 aa16.54■□□□□ 0.24
SFXN2-213ENST00000602868 PSMD1Q99460 953 aa16.54■□□□□ 0.24
SFXN2-213ENST00000602868 IBTKQ9P2D0 1353 aaPredicted RBP16.53■□□□□ 0.24
SFXN2-213ENST00000602868 SUSD4Q5VX71 490 aa16.53■□□□□ 0.24
SFXN2-213ENST00000602868 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
SFXN2-213ENST00000602868 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
SFXN2-213ENST00000602868 TAF1DQ9H5J8 278 aaPredicted RBP16.53■□□□□ 0.24
SFXN2-213ENST00000602868 HACL1Q9UJ83 578 aa16.53■□□□□ 0.24
SFXN2-213ENST00000602868 SLX4Q8IY92 1834 aa16.53■□□□□ 0.24
SFXN2-213ENST00000602868 COL11A2P13942 1736 aaPredicted RBP16.53■□□□□ 0.24
SFXN2-213ENST00000602868 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.24
SFXN2-213ENST00000602868 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
SFXN2-213ENST00000602868 E9PSI1 815 aa16.52■□□□□ 0.24
SFXN2-213ENST00000602868 EXOSC9Q06265 439 aaKnown RBP16.52■□□□□ 0.24
SFXN2-213ENST00000602868 GPC2Q8N158 579 aa16.52■□□□□ 0.24
SFXN2-213ENST00000602868 ISCA1Q9BUE6 129 aa16.52■□□□□ 0.24
SFXN2-213ENST00000602868 TMX4Q9H1E5 349 aaPredicted RBP16.52■□□□□ 0.24
SFXN2-213ENST00000602868 PHAXQ9H814 394 aaKnown RBP16.52■□□□□ 0.24
SFXN2-213ENST00000602868 FZD9O00144 591 aa16.51■□□□□ 0.23
SFXN2-213ENST00000602868 NTSR2O95665 410 aa16.51■□□□□ 0.23
SFXN2-213ENST00000602868 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
SFXN2-213ENST00000602868 SLFN5Q08AF3 891 aa16.51■□□□□ 0.23
SFXN2-213ENST00000602868 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
SFXN2-213ENST00000602868 NLRP10Q86W26 655 aa16.51■□□□□ 0.23
SFXN2-213ENST00000602868 TRMT2AQ8IZ69 625 aaKnown RBP16.51■□□□□ 0.23
SFXN2-213ENST00000602868 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
SFXN2-213ENST00000602868 STK31Q9BXU1 1019 aa16.51■□□□□ 0.23
SFXN2-213ENST00000602868 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
SFXN2-213ENST00000602868 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
SFXN2-213ENST00000602868 PASKQ96RG2 1323 aa16.5■□□□□ 0.23
SFXN2-213ENST00000602868 TMEM88BA6NKF7 163 aa16.5■□□□□ 0.23
SFXN2-213ENST00000602868 DDX58O95786 925 aaKnown RBP16.5■□□□□ 0.23
SFXN2-213ENST00000602868 SLC4A2P04920 1241 aa16.5■□□□□ 0.23
SFXN2-213ENST00000602868 GPTP24298 496 aa16.5■□□□□ 0.23
SFXN2-213ENST00000602868 CNTNAP1P78357 1384 aa16.5■□□□□ 0.23
SFXN2-213ENST00000602868 LAMB4A4D0S4 1761 aa16.49■□□□□ 0.23
SFXN2-213ENST00000602868 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
SFXN2-213ENST00000602868 RIC3Q7Z5B4 369 aa16.49■□□□□ 0.23
SFXN2-213ENST00000602868 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
SFXN2-213ENST00000602868 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
SFXN2-213ENST00000602868 PRDM10Q9NQV6 1147 aa16.49■□□□□ 0.23
SFXN2-213ENST00000602868 EPHX2P34913 555 aa16.48■□□□□ 0.23
SFXN2-213ENST00000602868 EIF6P56537 245 aaKnown RBP16.48■□□□□ 0.23
SFXN2-213ENST00000602868 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
SFXN2-213ENST00000602868 SYNE4Q8N205 404 aa16.48■□□□□ 0.23
SFXN2-213ENST00000602868 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
SFXN2-213ENST00000602868 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
SFXN2-213ENST00000602868 METTL22Q9BUU2 404 aaPredicted RBP16.48■□□□□ 0.23
SFXN2-213ENST00000602868 ZNF277Q9NRM2 450 aaPredicted RBP16.48■□□□□ 0.23
SFXN2-213ENST00000602868 FAM177BA6PVY3 158 aa16.47■□□□□ 0.23
SFXN2-213ENST00000602868 LMOD1P29536 600 aaPredicted RBP16.47■□□□□ 0.23
SFXN2-213ENST00000602868 NUTM1Q86Y26 1132 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms