RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 EPHA10Q5JZY3 1008 aa27.42■■□□□ 1.98
PPFIA3-211ENST00000602848 OTUD7AQ8TE49 926 aaPredicted RBP27.42■■□□□ 1.98
PPFIA3-211ENST00000602848 COPRSQ9NQ92 184 aa27.42■■□□□ 1.98
PPFIA3-211ENST00000602848 PCCAP05165 728 aaPredicted RBP27.41■■□□□ 1.98
PPFIA3-211ENST00000602848 MX1P20591 662 aa27.41■■□□□ 1.98
PPFIA3-211ENST00000602848 GSPT1P15170 499 aaKnown RBP27.41■■□□□ 1.98
PPFIA3-211ENST00000602848 COL5A3P25940 1745 aaPredicted RBP27.4■■□□□ 1.98
PPFIA3-211ENST00000602848 RGL2O15211 777 aa27.4■■□□□ 1.98
PPFIA3-211ENST00000602848 CDC45O75419 566 aa27.4■■□□□ 1.98
PPFIA3-211ENST00000602848 FOXO4P98177 505 aa27.4■■□□□ 1.98
PPFIA3-211ENST00000602848 CLASRPQ8N2M8 674 aaKnown RBP27.39■■□□□ 1.98
PPFIA3-211ENST00000602848 ZBTB38Q8NAP3 1195 aaPredicted RBP27.39■■□□□ 1.98
PPFIA3-211ENST00000602848 ARXQ96QS3 562 aa27.39■■□□□ 1.98
PPFIA3-211ENST00000602848 PLA2G12BQ9BX93 195 aa27.39■■□□□ 1.98
PPFIA3-211ENST00000602848 ANKRD36CQ5JPF3 1778 aa27.39■■□□□ 1.97
PPFIA3-211ENST00000602848 CDHR2Q9BYE9 1310 aa27.38■■□□□ 1.97
PPFIA3-211ENST00000602848 CNTNAP4Q9C0A0 1308 aa27.38■■□□□ 1.97
PPFIA3-211ENST00000602848 SEC24BO95487 1268 aa27.38■■□□□ 1.97
PPFIA3-211ENST00000602848 RC3H1Q5TC82 1133 aaKnown RBP27.38■■□□□ 1.97
PPFIA3-211ENST00000602848 BTAF1O14981 1849 aa27.38■■□□□ 1.97
PPFIA3-211ENST00000602848 TNS1Q9HBL0 1735 aaKnown RBP27.38■■□□□ 1.97
PPFIA3-211ENST00000602848 RFX5P48382 616 aaPredicted RBP27.38■■□□□ 1.97
PPFIA3-211ENST00000602848 HLFQ16534 295 aa27.37■■□□□ 1.97
PPFIA3-211ENST00000602848 PTF1AQ7RTS3 328 aa27.37■■□□□ 1.97
PPFIA3-211ENST00000602848 NLRP10Q86W26 655 aa27.37■■□□□ 1.97
PPFIA3-211ENST00000602848 DDRGK1Q96HY6 314 aa27.37■■□□□ 1.97
PPFIA3-211ENST00000602848 IPO9Q96P70 1041 aaKnown RBP27.37■■□□□ 1.97
PPFIA3-211ENST00000602848 IL1RAPL2Q9NP60 686 aa27.37■■□□□ 1.97
PPFIA3-211ENST00000602848 USP42Q9H9J4 1324 aaKnown RBP27.36■■□□□ 1.97
PPFIA3-211ENST00000602848 LMBR1LQ6UX01 489 aa27.36■■□□□ 1.97
PPFIA3-211ENST00000602848 ZNF34Q8IZ26 560 aa27.36■■□□□ 1.97
PPFIA3-211ENST00000602848 UPF1Q92900 1129 aaKnown RBP eCLIP27.36■■□□□ 1.972e-7■■■■□ 24.6
PPFIA3-211ENST00000602848 PA2G4Q9UQ80 394 aaKnown RBP27.36■■□□□ 1.97
PPFIA3-211ENST00000602848 NUP98P52948 1817 aa27.35■■□□□ 1.97
PPFIA3-211ENST00000602848 JARID2Q92833 1246 aaPredicted RBP27.35■■□□□ 1.97
PPFIA3-211ENST00000602848 TBC1D2BQ9UPU7 963 aa27.35■■□□□ 1.97
PPFIA3-211ENST00000602848 TTC41PQ6P2S7 1318 aa27.35■■□□□ 1.97
PPFIA3-211ENST00000602848 BCL11BQ9C0K0 894 aaPredicted RBP27.34■■□□□ 1.97
PPFIA3-211ENST00000602848 TRIM37O94972 964 aa27.34■■□□□ 1.97
PPFIA3-211ENST00000602848 SDSP20132 328 aa27.34■■□□□ 1.97
PPFIA3-211ENST00000602848 PTPN12Q05209 780 aaKnown RBP27.34■■□□□ 1.97
PPFIA3-211ENST00000602848 CASC1Q6TDU7 716 aa27.34■■□□□ 1.97
PPFIA3-211ENST00000602848 TBC1D9Q6ZT07 1266 aa27.33■■□□□ 1.97
PPFIA3-211ENST00000602848 BCL11AQ9H165 835 aa27.33■■□□□ 1.97
PPFIA3-211ENST00000602848 MYH14Q7Z406 1995 aaKnown RBP27.32■■□□□ 1.96
PPFIA3-211ENST00000602848 SASH1O94885 1247 aa27.32■■□□□ 1.96
PPFIA3-211ENST00000602848 LINC00116Q8NCU8 138 aa27.32■■□□□ 1.96
PPFIA3-211ENST00000602848 GPATCH3Q96I76 525 aa27.32■■□□□ 1.96
PPFIA3-211ENST00000602848 AK7Q96M32 723 aa27.32■■□□□ 1.96
PPFIA3-211ENST00000602848 TBC1D32Q96NH3 1257 aa27.32■■□□□ 1.96
PPFIA3-211ENST00000602848 CAMTA2O94983 1202 aa27.31■■□□□ 1.96
PPFIA3-211ENST00000602848 PARP10Q53GL7 1025 aa27.31■■□□□ 1.96
PPFIA3-211ENST00000602848 CLEC4GQ6UXB4 293 aa27.31■■□□□ 1.96
PPFIA3-211ENST00000602848 FBXO3Q9UK99 471 aa27.31■■□□□ 1.96
PPFIA3-211ENST00000602848 HMGB2P26583 209 aaKnown RBP27.3■■□□□ 1.96
PPFIA3-211ENST00000602848 NUTM1Q86Y26 1132 aa27.3■■□□□ 1.96
PPFIA3-211ENST00000602848 ZNF652Q9Y2D9 606 aa27.3■■□□□ 1.96
PPFIA3-211ENST00000602848 LY75O60449 1722 aa27.3■■□□□ 1.96
PPFIA3-211ENST00000602848 CSF1RP07333 972 aa27.3■■□□□ 1.96
PPFIA3-211ENST00000602848 IFIT2P09913 472 aaKnown RBP27.3■■□□□ 1.96
PPFIA3-211ENST00000602848 ERC2O15083 957 aa27.29■■□□□ 1.96
PPFIA3-211ENST00000602848 HSP90B1P14625 803 aaKnown RBP27.28■■□□□ 1.96
PPFIA3-211ENST00000602848 FAM89AQ96GI7 184 aa27.28■■□□□ 1.96
PPFIA3-211ENST00000602848 CCNL1Q9UK58 526 aaPredicted RBP27.28■■□□□ 1.96
PPFIA3-211ENST00000602848 RPS6KA4O75676 772 aa27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 GPTP24298 496 aa27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 TRMT112Q9UI30 125 aaKnown RBP27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 SOCS7O14512 581 aa27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 GLRX3O76003 335 aaKnown RBP27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 CIAO1O76071 339 aa27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 MFAP1P55081 439 aaKnown RBP27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 RTL5Q5HYW3 569 aaPredicted RBP27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 SIL1Q9H173 461 aa27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 ECHDC1Q9NTX5 307 aa27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 CHMP3Q9Y3E7 222 aa27.27■■□□□ 1.96
PPFIA3-211ENST00000602848 TUBGCP6Q96RT7 1819 aa27.26■■□□□ 1.95
PPFIA3-211ENST00000602848 PI4K2BQ8TCG2 481 aa27.26■■□□□ 1.95
PPFIA3-211ENST00000602848 C22orf23Q9BZE7 217 aa27.26■■□□□ 1.95
PPFIA3-211ENST00000602848 IL15P40933 162 aaPredicted RBP27.25■■□□□ 1.95
PPFIA3-211ENST00000602848 CCDC57Q2TAC2 916 aa27.25■■□□□ 1.95
PPFIA3-211ENST00000602848 AACSQ86V21 672 aa27.25■■□□□ 1.95
PPFIA3-211ENST00000602848 CCDC125Q86Z20 511 aa27.25■■□□□ 1.95
PPFIA3-211ENST00000602848 KLHDC4Q8TBB5 520 aa27.25■■□□□ 1.95
PPFIA3-211ENST00000602848 GPR108Q9NPR9 543 aa27.25■■□□□ 1.95
PPFIA3-211ENST00000602848 PDE8AO60658 829 aa27.24■■□□□ 1.95
PPFIA3-211ENST00000602848 IRS4O14654 1257 aaPredicted RBP27.23■■□□□ 1.95
PPFIA3-211ENST00000602848 UTP14AQ9BVJ6 771 aaKnown RBP27.23■■□□□ 1.95
PPFIA3-211ENST00000602848 UBN2Q6ZU65 1347 aa27.23■■□□□ 1.95
PPFIA3-211ENST00000602848 BCORQ6W2J9 1755 aa27.23■■□□□ 1.95
PPFIA3-211ENST00000602848 EYA2O00167 538 aa27.23■■□□□ 1.95
PPFIA3-211ENST00000602848 RBM25P49756 843 aaKnown RBP27.23■■□□□ 1.95
PPFIA3-211ENST00000602848 EAF2Q96CJ1 260 aaPredicted RBP27.23■■□□□ 1.95
PPFIA3-211ENST00000602848 SH3TC1Q8TE82 1336 aa27.21■■□□□ 1.95
PPFIA3-211ENST00000602848 TRIM6-TRIM34B2RNG4 842 aa27.2■■□□□ 1.95
PPFIA3-211ENST00000602848 CTSWP56202 376 aa27.2■■□□□ 1.95
PPFIA3-211ENST00000602848 IFIT5Q13325 482 aaKnown RBP27.2■■□□□ 1.95
PPFIA3-211ENST00000602848 TSHZ3Q63HK5 1081 aa27.2■■□□□ 1.95
PPFIA3-211ENST00000602848 TTLL11Q8NHH1 800 aa27.2■■□□□ 1.95
PPFIA3-211ENST00000602848 APBA3O96018 575 aa27.19■■□□□ 1.94
PPFIA3-211ENST00000602848 TFCP2Q12800 502 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms