RNA–Protein interactions for RNA: ENST00000602670.1

SFXN2-209, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-209ENST00000602670 USP50Q70EL3 339 aaPredicted RBP17.12■□□□□ 0.33
SFXN2-209ENST00000602670 ABCC12Q96J65 1359 aa17.12■□□□□ 0.33
SFXN2-209ENST00000602670 NBPF26B4DH59 902 aa17.11■□□□□ 0.33
SFXN2-209ENST00000602670 CA12O43570 354 aa17.11■□□□□ 0.33
SFXN2-209ENST00000602670 CRY2Q49AN0 593 aa17.11■□□□□ 0.33
SFXN2-209ENST00000602670 NBPF10Q6P3W6 841 aaKnown RBP17.11■□□□□ 0.33
SFXN2-209ENST00000602670 NBPF15Q8N660 670 aa17.11■□□□□ 0.33
SFXN2-209ENST00000602670 SAPCD2Q86UD0 394 aa17.1■□□□□ 0.33
SFXN2-209ENST00000602670 SLC51AQ86UW1 340 aa17.1■□□□□ 0.33
SFXN2-209ENST00000602670 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
SFXN2-209ENST00000602670 HLFQ16534 295 aa17.09■□□□□ 0.33
SFXN2-209ENST00000602670 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
SFXN2-209ENST00000602670 LARGE2Q8N3Y3 721 aa17.09■□□□□ 0.33
SFXN2-209ENST00000602670 U2SURPO15042 1029 aaKnown RBP17.08■□□□□ 0.32
SFXN2-209ENST00000602670 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.32
SFXN2-209ENST00000602670 DGKZQ13574 1117 aa17.08■□□□□ 0.32
SFXN2-209ENST00000602670 CELF2O95319 508 aaKnown RBP17.07■□□□□ 0.32
SFXN2-209ENST00000602670 GTF2E1P29083 439 aaPredicted RBP17.07■□□□□ 0.32
SFXN2-209ENST00000602670 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
SFXN2-209ENST00000602670 HHIPL1Q96JK4 782 aa17.07■□□□□ 0.32
SFXN2-209ENST00000602670 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
SFXN2-209ENST00000602670 RIC1Q4ADV7 1423 aa17.06■□□□□ 0.32
SFXN2-209ENST00000602670 HOXA10P31260 410 aaPredicted RBP17.06■□□□□ 0.32
SFXN2-209ENST00000602670 PHACTR3Q96KR7 559 aa17.06■□□□□ 0.32
SFXN2-209ENST00000602670 GPRC5DQ9NZD1 345 aa17.06■□□□□ 0.32
SFXN2-209ENST00000602670 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
SFXN2-209ENST00000602670 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
SFXN2-209ENST00000602670 CIAPIN1Q6FI81 312 aa17.05■□□□□ 0.32
SFXN2-209ENST00000602670 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
SFXN2-209ENST00000602670 GLIS2Q9BZE0 524 aaPredicted RBP17.05■□□□□ 0.32
SFXN2-209ENST00000602670 RPGRQ92834 1020 aaKnown RBP17.04■□□□□ 0.32
SFXN2-209ENST00000602670 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
SFXN2-209ENST00000602670 NUP98P52948 1817 aa17.03■□□□□ 0.32
SFXN2-209ENST00000602670 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
SFXN2-209ENST00000602670 LAMB4A4D0S4 1761 aa17.03■□□□□ 0.32
SFXN2-209ENST00000602670 PER1O15534 1290 aaPredicted RBP17.03■□□□□ 0.32
SFXN2-209ENST00000602670 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.32
SFXN2-209ENST00000602670 PPEF1O14829 653 aaPredicted RBP17.02■□□□□ 0.32
SFXN2-209ENST00000602670 PPIP5K2O43314 1243 aa17.02■□□□□ 0.32
SFXN2-209ENST00000602670 PRKAR2BP31323 418 aa17.02■□□□□ 0.32
SFXN2-209ENST00000602670 AOC3Q16853 763 aa17.02■□□□□ 0.32
SFXN2-209ENST00000602670 ZIC5Q96T25 663 aa17.02■□□□□ 0.32
SFXN2-209ENST00000602670 PGAP2Q9UHJ9 254 aa17.02■□□□□ 0.32
SFXN2-209ENST00000602670 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.31
SFXN2-209ENST00000602670 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
SFXN2-209ENST00000602670 CXCL9Q07325 125 aa17.01■□□□□ 0.31
SFXN2-209ENST00000602670 MCM10Q7L590 875 aa17.01■□□□□ 0.31
SFXN2-209ENST00000602670 CRAMP1Q96RY5 1269 aa17.01■□□□□ 0.31
SFXN2-209ENST00000602670 RSPH6AQ9H0K4 717 aa17.01■□□□□ 0.31
SFXN2-209ENST00000602670 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
SFXN2-209ENST00000602670 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
SFXN2-209ENST00000602670 GMPSP49915 693 aaPredicted RBP17■□□□□ 0.31
SFXN2-209ENST00000602670 NOGQ13253 232 aa17■□□□□ 0.31
SFXN2-209ENST00000602670 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
SFXN2-209ENST00000602670 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
SFXN2-209ENST00000602670 MAP3K15Q6ZN16 1313 aa16.99■□□□□ 0.31
SFXN2-209ENST00000602670 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
SFXN2-209ENST00000602670 ERVV-1B6SEH8 477 aa16.99■□□□□ 0.31
SFXN2-209ENST00000602670 HIRAP54198 1017 aaPredicted RBP16.99■□□□□ 0.31
SFXN2-209ENST00000602670 SOX10P56693 466 aa16.99■□□□□ 0.31
SFXN2-209ENST00000602670 ZNRF3Q9ULT6 936 aa16.99■□□□□ 0.31
SFXN2-209ENST00000602670 CDHR2Q9BYE9 1310 aa16.98■□□□□ 0.31
SFXN2-209ENST00000602670 GPTP24298 496 aa16.98■□□□□ 0.31
SFXN2-209ENST00000602670 SUSD4Q5VX71 490 aa16.98■□□□□ 0.31
SFXN2-209ENST00000602670 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
SFXN2-209ENST00000602670 TRPM4Q8TD43 1214 aa16.98■□□□□ 0.31
SFXN2-209ENST00000602670 ZC3H15Q8WU90 426 aaKnown RBP16.98■□□□□ 0.31
SFXN2-209ENST00000602670 VPS33BQ9H267 617 aa16.98■□□□□ 0.31
SFXN2-209ENST00000602670 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
SFXN2-209ENST00000602670 CDC37L1Q7L3B6 337 aa16.97■□□□□ 0.31
SFXN2-209ENST00000602670 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
SFXN2-209ENST00000602670 ATP6V0A2Q9Y487 856 aa16.97■□□□□ 0.31
SFXN2-209ENST00000602670 NTSR2O95665 410 aa16.96■□□□□ 0.31
SFXN2-209ENST00000602670 HUNKP57058 714 aa16.96■□□□□ 0.31
SFXN2-209ENST00000602670 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
SFXN2-209ENST00000602670 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.31
SFXN2-209ENST00000602670 SHTN1A0MZ66 631 aa16.95■□□□□ 0.3
SFXN2-209ENST00000602670 FAM155AB1AL88 458 aaPredicted RBP16.95■□□□□ 0.3
SFXN2-209ENST00000602670 PRPF38BQ5VTL8 546 aaKnown RBP16.95■□□□□ 0.3
SFXN2-209ENST00000602670 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
SFXN2-209ENST00000602670 SAGE1Q9NXZ1 904 aa16.95■□□□□ 0.3
SFXN2-209ENST00000602670 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
SFXN2-209ENST00000602670 DLK2Q6UY11 383 aa16.94■□□□□ 0.3
SFXN2-209ENST00000602670 ZNF34Q8IZ26 560 aa16.94■□□□□ 0.3
SFXN2-209ENST00000602670 SUPT20HQ8NEM7 779 aa16.94■□□□□ 0.3
SFXN2-209ENST00000602670 BCL2L13Q9BXK5 485 aa16.94■□□□□ 0.3
SFXN2-209ENST00000602670 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
SFXN2-209ENST00000602670 ABCC4O15439 1325 aa16.94■□□□□ 0.3
SFXN2-209ENST00000602670 KDM3BQ7LBC6 1761 aa16.93■□□□□ 0.3
SFXN2-209ENST00000602670 RAD17O75943 681 aa16.93■□□□□ 0.3
SFXN2-209ENST00000602670 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
SFXN2-209ENST00000602670 USP48Q86UV5 1035 aa16.93■□□□□ 0.3
SFXN2-209ENST00000602670 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
SFXN2-209ENST00000602670 MIS18AQ9NYP9 233 aa16.93■□□□□ 0.3
SFXN2-209ENST00000602670 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
SFXN2-209ENST00000602670 TAF7Q15545 349 aaPredicted RBP16.92■□□□□ 0.3
SFXN2-209ENST00000602670 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
SFXN2-209ENST00000602670 DPP8Q6V1X1 898 aaPredicted RBP16.92■□□□□ 0.3
SFXN2-209ENST00000602670 NLRP3Q96P20 1036 aa16.92■□□□□ 0.3
SFXN2-209ENST00000602670 CNOT7Q9UIV1 285 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms