RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ATAD2Q6PL18 1390 aa10.31□□□□□ -0.76
COMMD3-215ENST00000602574 SLU7O95391 586 aaKnown RBP10.31□□□□□ -0.76
COMMD3-215ENST00000602574 LONRF3Q496Y0 759 aa10.31□□□□□ -0.76
COMMD3-215ENST00000602574 C3orf20Q8ND61 904 aa10.31□□□□□ -0.76
COMMD3-215ENST00000602574 KCNF1Q9H3M0 494 aa10.31□□□□□ -0.76
COMMD3-215ENST00000602574 UNC45AQ9H3U1 944 aa10.31□□□□□ -0.76
COMMD3-215ENST00000602574 BATF3Q9NR55 127 aa10.31□□□□□ -0.76
COMMD3-215ENST00000602574 U3KPZ7 1027 aaPredicted RBP10.31□□□□□ -0.76
COMMD3-215ENST00000602574 MAGI3Q5TCQ9 1506 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 EME2A4GXA9 379 aaPredicted RBP10.3□□□□□ -0.76
COMMD3-215ENST00000602574 HMGB1P1B2RPK0 211 aaPredicted RBP10.3□□□□□ -0.76
COMMD3-215ENST00000602574 ADCY5O95622 1261 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 ZNF24P17028 368 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 DBN1Q16643 649 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 GORABQ5T7V8 394 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 FOXD4L5Q5VV16 416 aaPredicted RBP10.3□□□□□ -0.76
COMMD3-215ENST00000602574 PHC3Q8NDX5 983 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 FOXD4L4Q8WXT5 416 aaPredicted RBP10.3□□□□□ -0.76
COMMD3-215ENST00000602574 RBM17Q96I25 401 aaKnown RBP10.3□□□□□ -0.76
COMMD3-215ENST00000602574 YIPF2Q9BWQ6 316 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 IRF2BPLQ9H1B7 796 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 TMEM63CQ9P1W3 806 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 CCDC171Q6TFL3 1326 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 SYCE3A1L190 88 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 OPA1O60313 960 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 PYGBP11216 843 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 OAS2P29728 719 aaKnown RBP10.3□□□□□ -0.76
COMMD3-215ENST00000602574 GCKP35557 465 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 SESN3P58005 492 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 ISM2Q6H9L7 571 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 FILIP1Q7Z7B0 1213 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 MFN1Q8IWA4 741 aa10.3□□□□□ -0.76
COMMD3-215ENST00000602574 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
COMMD3-215ENST00000602574 EZH1Q92800 747 aaPredicted RBP10.3□□□□□ -0.76
COMMD3-215ENST00000602574 ATXN2Q99700 1313 aaKnown RBP10.3□□□□□ -0.76
COMMD3-215ENST00000602574 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 WDR62O43379 1518 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 FCHSD2O94868 740 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 MYL1P05976 194 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 EPRSP07814 1512 aaKnown RBP10.29□□□□□ -0.76
COMMD3-215ENST00000602574 GJA8P48165 433 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 CLCN6P51797 869 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 TAF7Q15545 349 aaPredicted RBP10.29□□□□□ -0.76
COMMD3-215ENST00000602574 ELF2Q15723 593 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 GPRASP1Q5JY77 1395 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 TMCO3Q6UWJ1 677 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 ELOA2Q8IYF1 753 aaPredicted RBP10.29□□□□□ -0.76
COMMD3-215ENST00000602574 MAB21L3Q8N8X9 362 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 PARD3Q8TEW0 1356 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 PDRG1Q9NUG6 133 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 ZNF215Q9UL58 517 aaPredicted RBP10.29□□□□□ -0.76
COMMD3-215ENST00000602574 ODF2LQ9ULJ1 636 aa10.29□□□□□ -0.76
COMMD3-215ENST00000602574 AATKQ6ZMQ8 1374 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 ANKRD30AQ9BXX3 1397 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 F8VZ95 297 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 K7ELQ4 463 aaPredicted RBP10.28□□□□□ -0.76
COMMD3-215ENST00000602574 ERLIN1O75477 346 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 NAA30Q147X3 362 aaPredicted RBP10.28□□□□□ -0.76
COMMD3-215ENST00000602574 C16orf87Q6PH81 154 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 BHMTQ93088 406 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 SAAL1Q96ER3 474 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 CABS1Q96KC9 395 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 MYO6Q9UM54 1294 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 PZPP20742 1482 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 SHTN1A0MZ66 631 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 AHCYL1O43865 530 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 PYGLP06737 847 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 G3BP1Q13283 466 aaKnown RBP eCLIP10.28□□□□□ -0.76
COMMD3-215ENST00000602574 MYOCDQ8IZQ8 938 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 PARD3BQ8TEW8 1205 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 ADAM21Q9UKJ8 722 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 TMEM98Q9Y2Y6 226 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 FANCD2Q9BXW9 1451 aa10.28□□□□□ -0.76
COMMD3-215ENST00000602574 PPFIA4O75335 1185 aa10.27□□□□□ -0.76
COMMD3-215ENST00000602574 LMAN1P49257 510 aa10.27□□□□□ -0.76
COMMD3-215ENST00000602574 PRPF4BQ13523 1007 aaKnown RBP10.27□□□□□ -0.76
COMMD3-215ENST00000602574 SFMBT2Q5VUG0 894 aa10.27□□□□□ -0.76
COMMD3-215ENST00000602574 MCTP1Q6DN14 999 aa10.27□□□□□ -0.76
COMMD3-215ENST00000602574 FAM81AQ8TBF8 368 aa10.27□□□□□ -0.76
COMMD3-215ENST00000602574 KAT2BQ92831 832 aa10.27□□□□□ -0.76
COMMD3-215ENST00000602574 KCND1Q9NSA2 647 aa10.27□□□□□ -0.76
COMMD3-215ENST00000602574 RGL1Q9NZL6 768 aa10.27□□□□□ -0.76
COMMD3-215ENST00000602574 CEP170Q5SW79 1584 aa10.27□□□□□ -0.77
COMMD3-215ENST00000602574 ADCY10Q96PN6 1610 aa10.27□□□□□ -0.77
COMMD3-215ENST00000602574 POLR3GO15318 223 aaPredicted RBP10.27□□□□□ -0.77
COMMD3-215ENST00000602574 ECM2O94769 699 aaPredicted RBP10.27□□□□□ -0.77
COMMD3-215ENST00000602574 FESP07332 822 aa10.27□□□□□ -0.77
COMMD3-215ENST00000602574 HARSP12081 509 aaKnown RBP10.27□□□□□ -0.77
COMMD3-215ENST00000602574 CEP135Q66GS9 1140 aa10.27□□□□□ -0.77
COMMD3-215ENST00000602574 MRFAP1L1Q96HT8 127 aa10.27□□□□□ -0.77
COMMD3-215ENST00000602574 ARHGEF10LQ9HCE6 1279 aa10.27□□□□□ -0.77
COMMD3-215ENST00000602574 TIMM44O43615 452 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 E2F6O75461 281 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 TUBB4AP04350 444 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 CDR1P51861 262 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 CCDC80Q76M96 950 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 IQCA1Q86XH1 822 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 ANKRD13BQ86YJ7 626 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 OR8K1Q8NGG5 319 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms