RNA–Protein interactions for RNA: ENST00000601853.5

FARP1-237, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-237ENST00000601853 USP50Q70EL3 339 aaPredicted RBP20.4■□□□□ 0.86
FARP1-237ENST00000601853 TLL2Q9Y6L7 1015 aa20.4■□□□□ 0.86
FARP1-237ENST00000601853 GTF2E1P29083 439 aaPredicted RBP20.39■□□□□ 0.85
FARP1-237ENST00000601853 CC2D1BQ5T0F9 858 aaKnown RBP20.39■□□□□ 0.85
FARP1-237ENST00000601853 HLFQ16534 295 aa20.38■□□□□ 0.85
FARP1-237ENST00000601853 LTBP1Q14766 1721 aa20.38■□□□□ 0.85
FARP1-237ENST00000601853 TRAF5O00463 557 aa20.37■□□□□ 0.85
FARP1-237ENST00000601853 HOXA10P31260 410 aaPredicted RBP20.37■□□□□ 0.85
FARP1-237ENST00000601853 GRM1Q13255 1194 aa20.37■□□□□ 0.85
FARP1-237ENST00000601853 COL4A5P29400 1685 aa20.37■□□□□ 0.85
FARP1-237ENST00000601853 CA12O43570 354 aa20.36■□□□□ 0.85
FARP1-237ENST00000601853 LARGE2Q8N3Y3 721 aa20.36■□□□□ 0.85
FARP1-237ENST00000601853 NYXQ9GZU5 481 aa20.36■□□□□ 0.85
FARP1-237ENST00000601853 TRPM7Q96QT4 1865 aa20.35■□□□□ 0.85
FARP1-237ENST00000601853 KIF7Q2M1P5 1343 aa20.35■□□□□ 0.85
FARP1-237ENST00000601853 AOC2O75106 756 aa20.35■□□□□ 0.85
FARP1-237ENST00000601853 TSKSQ9UJT2 592 aa20.35■□□□□ 0.85
FARP1-237ENST00000601853 PRKAR2BP31323 418 aa20.34■□□□□ 0.85
FARP1-237ENST00000601853 SAPCD2Q86UD0 394 aa20.34■□□□□ 0.85
FARP1-237ENST00000601853 MCOLN1Q9GZU1 580 aa20.34■□□□□ 0.85
FARP1-237ENST00000601853 RSPH6AQ9H0K4 717 aa20.34■□□□□ 0.85
FARP1-237ENST00000601853 NUTM1Q86Y26 1132 aa20.33■□□□□ 0.85
FARP1-237ENST00000601853 HHIPL1Q96JK4 782 aa20.33■□□□□ 0.85
FARP1-237ENST00000601853 ERVV-1B6SEH8 477 aa20.32■□□□□ 0.84
FARP1-237ENST00000601853 MCM10Q7L590 875 aa20.32■□□□□ 0.84
FARP1-237ENST00000601853 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
FARP1-237ENST00000601853 RPGRQ92834 1020 aaKnown RBP20.32■□□□□ 0.84
FARP1-237ENST00000601853 CRAMP1Q96RY5 1269 aa20.32■□□□□ 0.84
FARP1-237ENST00000601853 ADARB2Q9NS39 739 aaKnown RBP20.32■□□□□ 0.84
FARP1-237ENST00000601853 GPRC5DQ9NZD1 345 aa20.32■□□□□ 0.84
FARP1-237ENST00000601853 ABCC12Q96J65 1359 aa20.32■□□□□ 0.84
FARP1-237ENST00000601853 NPC1L1Q9UHC9 1359 aa20.32■□□□□ 0.84
FARP1-237ENST00000601853 NIM1KQ8IY84 436 aa20.31■□□□□ 0.84
FARP1-237ENST00000601853 VPS33BQ9H267 617 aa20.31■□□□□ 0.84
FARP1-237ENST00000601853 PGAP2Q9UHJ9 254 aa20.31■□□□□ 0.84
FARP1-237ENST00000601853 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
FARP1-237ENST00000601853 TNRC18O15417 2968 aaPredicted RBP20.29■□□□□ 0.84
FARP1-237ENST00000601853 RIC1Q4ADV7 1423 aa20.29■□□□□ 0.84
FARP1-237ENST00000601853 HTATSF1O43719 755 aaKnown RBP20.29■□□□□ 0.84
FARP1-237ENST00000601853 CELF2O95319 508 aaKnown RBP20.29■□□□□ 0.84
FARP1-237ENST00000601853 RBM17Q96I25 401 aaKnown RBP20.29■□□□□ 0.84
FARP1-237ENST00000601853 CASP8AP2Q9UKL3 1982 aa20.28■□□□□ 0.84
FARP1-237ENST00000601853 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
FARP1-237ENST00000601853 CFAP44Q96MT7 982 aa20.28■□□□□ 0.84
FARP1-237ENST00000601853 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.84
FARP1-237ENST00000601853 PDE4DIPQ5VU43 2346 aa20.27■□□□□ 0.84
FARP1-237ENST00000601853 IBTKQ9P2D0 1353 aaPredicted RBP20.27■□□□□ 0.84
FARP1-237ENST00000601853 PPEF1O14829 653 aaPredicted RBP20.27■□□□□ 0.84
FARP1-237ENST00000601853 PPIP5K2O43314 1243 aa20.27■□□□□ 0.84
FARP1-237ENST00000601853 CXCL9Q07325 125 aa20.27■□□□□ 0.84
FARP1-237ENST00000601853 ZC3H15Q8WU90 426 aaKnown RBP20.27■□□□□ 0.84
FARP1-237ENST00000601853 ZNRF3Q9ULT6 936 aa20.27■□□□□ 0.84
FARP1-237ENST00000601853 TCERG1O14776 1098 aaKnown RBP20.26■□□□□ 0.83
FARP1-237ENST00000601853 DGKZQ13574 1117 aa20.26■□□□□ 0.83
FARP1-237ENST00000601853 DCTN1Q14203 1278 aa20.26■□□□□ 0.83
FARP1-237ENST00000601853 SLC51AQ86UW1 340 aa20.26■□□□□ 0.83
FARP1-237ENST00000601853 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
FARP1-237ENST00000601853 GLIS2Q9BZE0 524 aaPredicted RBP20.26■□□□□ 0.83
FARP1-237ENST00000601853 AOC3Q16853 763 aa20.25■□□□□ 0.83
FARP1-237ENST00000601853 SUSD4Q5VX71 490 aa20.25■□□□□ 0.83
FARP1-237ENST00000601853 CIAPIN1Q6FI81 312 aa20.25■□□□□ 0.83
FARP1-237ENST00000601853 CCER1Q8TC90 406 aaPredicted RBP20.25■□□□□ 0.83
FARP1-237ENST00000601853 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
FARP1-237ENST00000601853 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
FARP1-237ENST00000601853 NUP98P52948 1817 aa20.25■□□□□ 0.83
FARP1-237ENST00000601853 UBN2Q6ZU65 1347 aa20.25■□□□□ 0.83
FARP1-237ENST00000601853 GMPSP49915 693 aaPredicted RBP20.24■□□□□ 0.83
FARP1-237ENST00000601853 TTLL7Q6ZT98 887 aa20.24■□□□□ 0.83
FARP1-237ENST00000601853 ZNF34Q8IZ26 560 aa20.24■□□□□ 0.83
FARP1-237ENST00000601853 RTFDC1Q9BY42 306 aaPredicted RBP20.24■□□□□ 0.83
FARP1-237ENST00000601853 TMX4Q9H1E5 349 aaPredicted RBP20.24■□□□□ 0.83
FARP1-237ENST00000601853 ATP6V0A2Q9Y487 856 aa20.24■□□□□ 0.83
FARP1-237ENST00000601853 GPTP24298 496 aa20.23■□□□□ 0.83
FARP1-237ENST00000601853 HIRAP54198 1017 aaPredicted RBP20.23■□□□□ 0.83
FARP1-237ENST00000601853 NOGQ13253 232 aa20.23■□□□□ 0.83
FARP1-237ENST00000601853 CNGB1Q14028 1251 aaPredicted RBP20.23■□□□□ 0.83
FARP1-237ENST00000601853 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
FARP1-237ENST00000601853 C3orf67Q6ZVT6 689 aa20.23■□□□□ 0.83
FARP1-237ENST00000601853 CDC37L1Q7L3B6 337 aa20.23■□□□□ 0.83
FARP1-237ENST00000601853 MIS18AQ9NYP9 233 aa20.23■□□□□ 0.83
FARP1-237ENST00000601853 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
FARP1-237ENST00000601853 NTSR2O95665 410 aa20.22■□□□□ 0.83
FARP1-237ENST00000601853 SUPT20HQ8NEM7 779 aa20.22■□□□□ 0.83
FARP1-237ENST00000601853 RRP7AQ9Y3A4 280 aaKnown RBP20.22■□□□□ 0.83
FARP1-237ENST00000601853 U2AF1L5P0DN76 240 aaPredicted RBP20.21■□□□□ 0.83
FARP1-237ENST00000601853 U2AF1Q01081 240 aaKnown RBP eCLIP20.21■□□□□ 0.83
FARP1-237ENST00000601853 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
FARP1-237ENST00000601853 NLRP3Q96P20 1036 aa20.21■□□□□ 0.83
FARP1-237ENST00000601853 TNIP1Q15025 636 aa20.2■□□□□ 0.82
FARP1-237ENST00000601853 GIGYF2Q6Y7W6 1299 aaKnown RBP20.2■□□□□ 0.82
FARP1-237ENST00000601853 PPP1R42Q7Z4L9 355 aa20.2■□□□□ 0.82
FARP1-237ENST00000601853 ZIC5Q96T25 663 aa20.2■□□□□ 0.82
FARP1-237ENST00000601853 ZBTB3Q9H5J0 574 aa20.2■□□□□ 0.82
FARP1-237ENST00000601853 ZNF408Q9H9D4 720 aa20.2■□□□□ 0.82
FARP1-237ENST00000601853 BBOX1O75936 387 aa20.19■□□□□ 0.82
FARP1-237ENST00000601853 MYL6BP14649 208 aa20.18■□□□□ 0.82
FARP1-237ENST00000601853 KIAA2012Q0VF49 1180 aa20.18■□□□□ 0.82
FARP1-237ENST00000601853 PARP10Q53GL7 1025 aa20.18■□□□□ 0.82
FARP1-237ENST00000601853 SP8Q8IXZ3 490 aa20.18■□□□□ 0.82
FARP1-237ENST00000601853 PNISRQ8TF01 805 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms