RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 UTP14AQ9BVJ6 771 aaKnown RBP16.43■□□□□ 0.22
USE1-209ENST00000601592 UTRNP46939 3433 aa16.43■□□□□ 0.22
USE1-209ENST00000601592 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
USE1-209ENST00000601592 ARHGAP27Q6ZUM4 889 aa16.42■□□□□ 0.22
USE1-209ENST00000601592 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
USE1-209ENST00000601592 TTLL6Q8N841 843 aa16.42■□□□□ 0.22
USE1-209ENST00000601592 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
USE1-209ENST00000601592 CCDC88AQ3V6T2 1871 aa16.42■□□□□ 0.22
USE1-209ENST00000601592 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
USE1-209ENST00000601592 SLFN5Q08AF3 891 aa16.41■□□□□ 0.22
USE1-209ENST00000601592 G2E3Q7L622 706 aa16.41■□□□□ 0.22
USE1-209ENST00000601592 MYD88Q99836 296 aa16.41■□□□□ 0.22
USE1-209ENST00000601592 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
USE1-209ENST00000601592 TRMT112Q9UI30 125 aaKnown RBP16.41■□□□□ 0.22
USE1-209ENST00000601592 DDX60Q8IY21 1712 aaKnown RBP16.4■□□□□ 0.22
USE1-209ENST00000601592 SRGNP10124 158 aa16.4■□□□□ 0.22
USE1-209ENST00000601592 MASTLQ96GX5 879 aa16.4■□□□□ 0.22
USE1-209ENST00000601592 MAP3K2Q9Y2U5 619 aa16.4■□□□□ 0.22
USE1-209ENST00000601592 PI4KAP2A4QPH2 592 aa16.39■□□□□ 0.21
USE1-209ENST00000601592 FLIIQ13045 1269 aa16.39■□□□□ 0.21
USE1-209ENST00000601592 FKBP5Q13451 457 aaPredicted RBP16.39■□□□□ 0.21
USE1-209ENST00000601592 STYK1Q6J9G0 422 aa16.39■□□□□ 0.21
USE1-209ENST00000601592 PI4KAP1Q8N8J0 262 aa16.39■□□□□ 0.21
USE1-209ENST00000601592 CNKSR1Q969H4 720 aa16.39■□□□□ 0.21
USE1-209ENST00000601592 ISCA1Q9BUE6 129 aa16.39■□□□□ 0.21
USE1-209ENST00000601592 SBF1O95248 1867 aa16.38■□□□□ 0.21
USE1-209ENST00000601592 NPR1P16066 1061 aa16.38■□□□□ 0.21
USE1-209ENST00000601592 RTL5Q5HYW3 569 aaPredicted RBP16.38■□□□□ 0.21
USE1-209ENST00000601592 KSR2Q6VAB6 950 aa16.38■□□□□ 0.21
USE1-209ENST00000601592 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
USE1-209ENST00000601592 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
USE1-209ENST00000601592 SH3TC1Q8TE82 1336 aa16.38■□□□□ 0.21
USE1-209ENST00000601592 ADCY9O60503 1353 aa16.38■□□□□ 0.21
USE1-209ENST00000601592 RIC1Q4ADV7 1423 aa16.37■□□□□ 0.21
USE1-209ENST00000601592 HCLS1P14317 486 aaPredicted RBP16.37■□□□□ 0.21
USE1-209ENST00000601592 NEXNQ0ZGT2 675 aa16.37■□□□□ 0.21
USE1-209ENST00000601592 PRPF40BQ6NWY9 871 aaKnown RBP16.37■□□□□ 0.21
USE1-209ENST00000601592 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
USE1-209ENST00000601592 METTL22Q9BUU2 404 aaPredicted RBP16.37■□□□□ 0.21
USE1-209ENST00000601592 TAF1P21675 1872 aa16.37■□□□□ 0.21
USE1-209ENST00000601592 FER1L6Q2WGJ9 1857 aa16.36■□□□□ 0.21
USE1-209ENST00000601592 C21orf2O43822 256 aa16.36■□□□□ 0.21
USE1-209ENST00000601592 FAM89AQ96GI7 184 aa16.36■□□□□ 0.21
USE1-209ENST00000601592 NLRP3Q96P20 1036 aa16.36■□□□□ 0.21
USE1-209ENST00000601592 MYH3P11055 1940 aa16.35■□□□□ 0.21
USE1-209ENST00000601592 KLRG2A4D1S0 409 aaPredicted RBP16.35■□□□□ 0.21
USE1-209ENST00000601592 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
USE1-209ENST00000601592 CWC25Q9NXE8 425 aaPredicted RBP16.35■□□□□ 0.21
USE1-209ENST00000601592 RASSF7Q02833 373 aa16.34■□□□□ 0.21
USE1-209ENST00000601592 CCDC191Q8NCU4 936 aa16.34■□□□□ 0.21
USE1-209ENST00000601592 ALDH1B1P30837 517 aa16.33■□□□□ 0.2
USE1-209ENST00000601592 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
USE1-209ENST00000601592 CWF19L2Q2TBE0 894 aaKnown RBP16.33■□□□□ 0.2
USE1-209ENST00000601592 CRY2Q49AN0 593 aa16.33■□□□□ 0.2
USE1-209ENST00000601592 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.2
USE1-209ENST00000601592 DNAAF4Q8WXU2 420 aa16.33■□□□□ 0.2
USE1-209ENST00000601592 JARID2Q92833 1246 aaPredicted RBP16.33■□□□□ 0.2
USE1-209ENST00000601592 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.2
USE1-209ENST00000601592 BCL2L13Q9BXK5 485 aa16.33■□□□□ 0.2
USE1-209ENST00000601592 F6X3S4 739 aa16.32■□□□□ 0.2
USE1-209ENST00000601592 IRS4O14654 1257 aaPredicted RBP16.32■□□□□ 0.2
USE1-209ENST00000601592 TIAM2Q8IVF5 1701 aa16.32■□□□□ 0.2
USE1-209ENST00000601592 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
USE1-209ENST00000601592 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
USE1-209ENST00000601592 IGKV5-2P06315 115 aa16.31■□□□□ 0.2
USE1-209ENST00000601592 SOGA3Q5TF21 947 aa16.31■□□□□ 0.2
USE1-209ENST00000601592 TRMT2AQ8IZ69 625 aaKnown RBP16.31■□□□□ 0.2
USE1-209ENST00000601592 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
USE1-209ENST00000601592 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
USE1-209ENST00000601592 PCCAP05165 728 aaPredicted RBP16.3■□□□□ 0.2
USE1-209ENST00000601592 CCDC93Q567U6 631 aa16.3■□□□□ 0.2
USE1-209ENST00000601592 C9orf131Q5VYM1 1079 aa16.3■□□□□ 0.2
USE1-209ENST00000601592 SLC4A10Q6U841 1118 aa16.3■□□□□ 0.2
USE1-209ENST00000601592 DDX46Q7L014 1031 aaKnown RBP16.3■□□□□ 0.2
USE1-209ENST00000601592 SSH1Q8WYL5 1049 aa16.3■□□□□ 0.2
USE1-209ENST00000601592 SMC4Q9NTJ3 1288 aa16.3■□□□□ 0.2
USE1-209ENST00000601592 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
USE1-209ENST00000601592 ABCC4O15439 1325 aa16.29■□□□□ 0.2
USE1-209ENST00000601592 NFKBIEO00221 500 aa16.29■□□□□ 0.2
USE1-209ENST00000601592 PPEF1O14829 653 aaPredicted RBP16.29■□□□□ 0.2
USE1-209ENST00000601592 HSP90B1P14625 803 aaKnown RBP16.29■□□□□ 0.2
USE1-209ENST00000601592 HOXA10P31260 410 aaPredicted RBP16.29■□□□□ 0.2
USE1-209ENST00000601592 OLFM4Q6UX06 510 aa16.29■□□□□ 0.2
USE1-209ENST00000601592 MRPL50Q8N5N7 158 aaKnown RBP16.29■□□□□ 0.2
USE1-209ENST00000601592 ZNF526Q8TF50 670 aaPredicted RBP16.29■□□□□ 0.2
USE1-209ENST00000601592 CRAMP1Q96RY5 1269 aa16.29■□□□□ 0.2
USE1-209ENST00000601592 UBE3BQ7Z3V4 1068 aa16.28■□□□□ 0.2
USE1-209ENST00000601592 ZNF784Q8NCA9 323 aaPredicted RBP16.28■□□□□ 0.2
USE1-209ENST00000601592 TAOK3Q9H2K8 898 aa16.28■□□□□ 0.2
USE1-209ENST00000601592 ZBED9Q6R2W3 1325 aa16.27■□□□□ 0.2
USE1-209ENST00000601592 CT47B1P0C2W7 299 aaPredicted RBP16.27■□□□□ 0.2
USE1-209ENST00000601592 LMNB1P20700 586 aa16.27■□□□□ 0.2
USE1-209ENST00000601592 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
USE1-209ENST00000601592 LINS1Q8NG48 757 aa16.27■□□□□ 0.2
USE1-209ENST00000601592 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.2
USE1-209ENST00000601592 TMX4Q9H1E5 349 aaPredicted RBP16.27■□□□□ 0.2
USE1-209ENST00000601592 PDE8AO60658 829 aa16.26■□□□□ 0.19
USE1-209ENST00000601592 GCKRQ14397 625 aa16.26■□□□□ 0.19
USE1-209ENST00000601592 C7orf43Q8WVR3 580 aa16.26■□□□□ 0.19
USE1-209ENST00000601592 PTPRCP08575 1304 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms