RNA–Protein interactions for RNA: ENST00000601522.1

TMEM143-213, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-213ENST00000601522 C9orf131Q5VYM1 1079 aa26.63■■□□□ 1.85
TMEM143-213ENST00000601522 RPGRQ92834 1020 aaKnown RBP26.63■■□□□ 1.85
TMEM143-213ENST00000601522 TRMT112Q9UI30 125 aaKnown RBP26.63■■□□□ 1.85
TMEM143-213ENST00000601522 RIC1Q4ADV7 1423 aa26.63■■□□□ 1.85
TMEM143-213ENST00000601522 ADCY9O60503 1353 aa26.62■■□□□ 1.85
TMEM143-213ENST00000601522 PHAXQ9H814 394 aaKnown RBP26.62■■□□□ 1.85
TMEM143-213ENST00000601522 TRIM28Q13263 835 aaKnown RBP26.61■■□□□ 1.85
TMEM143-213ENST00000601522 GPBP1L1Q9HC44 474 aaPredicted RBP26.61■■□□□ 1.85
TMEM143-213ENST00000601522 ZNF219Q9P2Y4 722 aaPredicted RBP26.61■■□□□ 1.85
TMEM143-213ENST00000601522 LMNB1P20700 586 aa26.6■■□□□ 1.85
TMEM143-213ENST00000601522 RBM17Q96I25 401 aaKnown RBP26.6■■□□□ 1.85
TMEM143-213ENST00000601522 ISCA1Q9BUE6 129 aa26.6■■□□□ 1.85
TMEM143-213ENST00000601522 RNF181Q9P0P0 153 aa26.6■■□□□ 1.85
TMEM143-213ENST00000601522 SH3TC1Q8TE82 1336 aa26.6■■□□□ 1.85
TMEM143-213ENST00000601522 ABCC12Q96J65 1359 aa26.59■■□□□ 1.85
TMEM143-213ENST00000601522 HOXA10P31260 410 aaPredicted RBP26.59■■□□□ 1.85
TMEM143-213ENST00000601522 DIEXFQ68CQ4 756 aaKnown RBP26.59■■□□□ 1.85
TMEM143-213ENST00000601522 SLC4A2P04920 1241 aa26.58■■□□□ 1.85
TMEM143-213ENST00000601522 HSP90B1P14625 803 aaKnown RBP26.57■■□□□ 1.84
TMEM143-213ENST00000601522 EXOSC9Q06265 439 aaKnown RBP26.57■■□□□ 1.84
TMEM143-213ENST00000601522 COL11A2P13942 1736 aaPredicted RBP26.56■■□□□ 1.84
TMEM143-213ENST00000601522 ATP5J2-PTCD1G3V325 749 aa26.56■■□□□ 1.84
TMEM143-213ENST00000601522 VAMP4O75379 141 aa26.56■■□□□ 1.84
TMEM143-213ENST00000601522 CCDC93Q567U6 631 aa26.56■■□□□ 1.84
TMEM143-213ENST00000601522 RTKN2Q8IZC4 609 aa26.56■■□□□ 1.84
TMEM143-213ENST00000601522 CRAMP1Q96RY5 1269 aa26.56■■□□□ 1.84
TMEM143-213ENST00000601522 ZC3H4Q9UPT8 1303 aaKnown RBP26.56■■□□□ 1.84
TMEM143-213ENST00000601522 RASSF7Q02833 373 aa26.55■■□□□ 1.84
TMEM143-213ENST00000601522 GRIPAP1Q4V328 841 aa26.55■■□□□ 1.84
TMEM143-213ENST00000601522 CC2D2BQ6DHV5 1058 aa26.55■■□□□ 1.84
TMEM143-213ENST00000601522 KSR2Q6VAB6 950 aa26.55■■□□□ 1.84
TMEM143-213ENST00000601522 ZNF526Q8TF50 670 aaPredicted RBP26.55■■□□□ 1.84
TMEM143-213ENST00000601522 C7orf43Q8WVR3 580 aa26.55■■□□□ 1.84
TMEM143-213ENST00000601522 TMX4Q9H1E5 349 aaPredicted RBP26.55■■□□□ 1.84
TMEM143-213ENST00000601522 TAOK3Q9H2K8 898 aa26.55■■□□□ 1.84
TMEM143-213ENST00000601522 LTBP3Q9NS15 1303 aa26.55■■□□□ 1.84
TMEM143-213ENST00000601522 NFKBIEO00221 500 aa26.54■■□□□ 1.84
TMEM143-213ENST00000601522 METTL22Q9BUU2 404 aaPredicted RBP26.54■■□□□ 1.84
TMEM143-213ENST00000601522 SPINK5Q9NQ38 1064 aaPredicted RBP26.54■■□□□ 1.84
TMEM143-213ENST00000601522 ZNF521Q96K83 1311 aa26.54■■□□□ 1.84
TMEM143-213ENST00000601522 NEXNQ0ZGT2 675 aa26.53■■□□□ 1.84
TMEM143-213ENST00000601522 CCDC191Q8NCU4 936 aa26.53■■□□□ 1.84
TMEM143-213ENST00000601522 MYD88Q99836 296 aa26.53■■□□□ 1.84
TMEM143-213ENST00000601522 ANKRD36CQ5JPF3 1778 aa26.53■■□□□ 1.84
TMEM143-213ENST00000601522 TCERG1O14776 1098 aaKnown RBP26.52■■□□□ 1.84
TMEM143-213ENST00000601522 HCLS1P14317 486 aaPredicted RBP26.52■■□□□ 1.84
TMEM143-213ENST00000601522 MAP3K2Q9Y2U5 619 aa26.52■■□□□ 1.84
TMEM143-213ENST00000601522 PI4KAP2A4QPH2 592 aa26.51■■□□□ 1.83
TMEM143-213ENST00000601522 E9PSI1 815 aa26.51■■□□□ 1.83
TMEM143-213ENST00000601522 PI4KAP1Q8N8J0 262 aa26.51■■□□□ 1.83
TMEM143-213ENST00000601522 FAM89AQ96GI7 184 aa26.51■■□□□ 1.83
TMEM143-213ENST00000601522 SLX4Q8IY92 1834 aa26.51■■□□□ 1.83
TMEM143-213ENST00000601522 KDM2BQ8NHM5 1336 aa26.5■■□□□ 1.83
TMEM143-213ENST00000601522 DDX46Q7L014 1031 aaKnown RBP26.5■■□□□ 1.83
TMEM143-213ENST00000601522 ZBTB38Q8NAP3 1195 aaPredicted RBP26.5■■□□□ 1.83
TMEM143-213ENST00000601522 CWC25Q9NXE8 425 aaPredicted RBP26.5■■□□□ 1.83
TMEM143-213ENST00000601522 BBOX1O75936 387 aa26.49■■□□□ 1.83
TMEM143-213ENST00000601522 ARFGEF2Q9Y6D5 1785 aa26.48■■□□□ 1.83
TMEM143-213ENST00000601522 FKBP4Q02790 459 aaKnown RBP eCLIP26.48■■□□□ 1.83
TMEM143-213ENST00000601522 FLIIQ13045 1269 aa26.48■■□□□ 1.83
TMEM143-213ENST00000601522 C3orf67Q6ZVT6 689 aa26.48■■□□□ 1.83
TMEM143-213ENST00000601522 SYNE4Q8N205 404 aa26.48■■□□□ 1.83
TMEM143-213ENST00000601522 PPEF1O14829 653 aaPredicted RBP26.47■■□□□ 1.83
TMEM143-213ENST00000601522 FKBP5Q13451 457 aaPredicted RBP26.47■■□□□ 1.83
TMEM143-213ENST00000601522 TNRC6CQ9HCJ0 1690 aaKnown RBP26.47■■□□□ 1.83
TMEM143-213ENST00000601522 IRS4O14654 1257 aaPredicted RBP26.46■■□□□ 1.83
TMEM143-213ENST00000601522 PCCAP05165 728 aaPredicted RBP26.46■■□□□ 1.83
TMEM143-213ENST00000601522 DPY19L2Q6NUT2 758 aa26.46■■□□□ 1.83
TMEM143-213ENST00000601522 SBF1O95248 1867 aa26.45■■□□□ 1.83
TMEM143-213ENST00000601522 SF3B3Q15393 1217 aaKnown RBP26.45■■□□□ 1.82
TMEM143-213ENST00000601522 G2E3Q7L622 706 aa26.45■■□□□ 1.82
TMEM143-213ENST00000601522 MIER1Q8N108 512 aa26.45■■□□□ 1.82
TMEM143-213ENST00000601522 PRELPP51888 382 aa26.44■■□□□ 1.82
TMEM143-213ENST00000601522 C1QTNF8P60827 252 aa26.44■■□□□ 1.82
TMEM143-213ENST00000601522 RTL5Q5HYW3 569 aaPredicted RBP26.44■■□□□ 1.82
TMEM143-213ENST00000601522 TMC4Q7Z404 712 aa26.44■■□□□ 1.82
TMEM143-213ENST00000601522 ZNF428Q96B54 188 aa26.44■■□□□ 1.82
TMEM143-213ENST00000601522 PSMD1Q99460 953 aa26.44■■□□□ 1.82
TMEM143-213ENST00000601522 FER1L6Q2WGJ9 1857 aa26.43■■□□□ 1.82
TMEM143-213ENST00000601522 SLFN5Q08AF3 891 aa26.43■■□□□ 1.82
TMEM143-213ENST00000601522 GRAPQ13588 217 aa26.43■■□□□ 1.82
TMEM143-213ENST00000601522 GRAPLQ8TC17 118 aaPredicted RBP26.43■■□□□ 1.82
TMEM143-213ENST00000601522 ATP6V0A2Q9Y487 856 aa26.43■■□□□ 1.82
TMEM143-213ENST00000601522 ABCC4O15439 1325 aa26.42■■□□□ 1.82
TMEM143-213ENST00000601522 GLTPD2A6NH11 291 aa26.42■■□□□ 1.82
TMEM143-213ENST00000601522 CACNA1SQ13698 1873 aa26.42■■□□□ 1.82
TMEM143-213ENST00000601522 OLFM4Q6UX06 510 aa26.41■■□□□ 1.82
TMEM143-213ENST00000601522 SP8Q8IXZ3 490 aa26.41■■□□□ 1.82
TMEM143-213ENST00000601522 DNAAF4Q8WXU2 420 aa26.41■■□□□ 1.82
TMEM143-213ENST00000601522 PDE8AO60658 829 aa26.4■■□□□ 1.82
TMEM143-213ENST00000601522 IGKV5-2P06315 115 aa26.4■■□□□ 1.82
TMEM143-213ENST00000601522 CACNA1FO60840 1977 aa26.39■■□□□ 1.82
TMEM143-213ENST00000601522 NEURL1BA8MQ27 555 aa26.39■■□□□ 1.82
TMEM143-213ENST00000601522 SUPT20HQ8NEM7 779 aa26.39■■□□□ 1.82
TMEM143-213ENST00000601522 ZNF277Q9NRM2 450 aaPredicted RBP26.39■■□□□ 1.82
TMEM143-213ENST00000601522 KIF3CO14782 793 aa26.38■■□□□ 1.81
TMEM143-213ENST00000601522 IARSP41252 1262 aaKnown RBP26.38■■□□□ 1.81
TMEM143-213ENST00000601522 CCDC152Q4G0S7 254 aa26.38■■□□□ 1.81
TMEM143-213ENST00000601522 C16orf71Q8IYS4 520 aaPredicted RBP26.38■■□□□ 1.81
TMEM143-213ENST00000601522 LINS1Q8NG48 757 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms