RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 GPR162Q16538 588 aa17.62■□□□□ 0.41
SNRPA-208ENST00000600456 ERFEQ4G0M1 354 aa17.62■□□□□ 0.41
SNRPA-208ENST00000600456 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
SNRPA-208ENST00000600456 CCDC24Q8N4L8 307 aa17.62■□□□□ 0.41
SNRPA-208ENST00000600456 MRPL50Q8N5N7 158 aaKnown RBP17.62■□□□□ 0.41
SNRPA-208ENST00000600456 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
SNRPA-208ENST00000600456 PIM2Q9P1W9 311 aa17.62■□□□□ 0.41
SNRPA-208ENST00000600456 SH3TC1Q8TE82 1336 aa17.62■□□□□ 0.41
SNRPA-208ENST00000600456 ABCC12Q96J65 1359 aa17.62■□□□□ 0.41
SNRPA-208ENST00000600456 ATP5J2-PTCD1G3V325 749 aa17.61■□□□□ 0.41
SNRPA-208ENST00000600456 SLC10A5Q5PT55 438 aa17.61■□□□□ 0.41
SNRPA-208ENST00000600456 DNAAF4Q8WXU2 420 aa17.61■□□□□ 0.41
SNRPA-208ENST00000600456 TRMT112Q9UI30 125 aaKnown RBP17.61■□□□□ 0.41
SNRPA-208ENST00000600456 GRIN3BO60391 1043 aa17.6■□□□□ 0.41
SNRPA-208ENST00000600456 SMC4Q9NTJ3 1288 aa17.6■□□□□ 0.41
SNRPA-208ENST00000600456 CWC25Q9NXE8 425 aaPredicted RBP17.6■□□□□ 0.41
SNRPA-208ENST00000600456 PTPRCP08575 1304 aa17.6■□□□□ 0.41
SNRPA-208ENST00000600456 ANKRD31Q8N7Z5 1873 aa17.6■□□□□ 0.41
SNRPA-208ENST00000600456 N4BP2Q86UW6 1770 aaPredicted RBP17.59■□□□□ 0.41
SNRPA-208ENST00000600456 SRGNP10124 158 aa17.59■□□□□ 0.41
SNRPA-208ENST00000600456 BRPF1P55201 1214 aaPredicted RBP17.59■□□□□ 0.41
SNRPA-208ENST00000600456 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
SNRPA-208ENST00000600456 STYK1Q6J9G0 422 aa17.59■□□□□ 0.41
SNRPA-208ENST00000600456 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
SNRPA-208ENST00000600456 IGKV5-2P06315 115 aa17.58■□□□□ 0.4
SNRPA-208ENST00000600456 HSP90B1P14625 803 aaKnown RBP17.58■□□□□ 0.4
SNRPA-208ENST00000600456 NPR1P16066 1061 aa17.58■□□□□ 0.4
SNRPA-208ENST00000600456 YBX3P16989 372 aaKnown RBP eCLIP17.58■□□□□ 0.4
SNRPA-208ENST00000600456 RARSP54136 660 aaKnown RBP17.58■□□□□ 0.4
SNRPA-208ENST00000600456 CRY2Q49AN0 593 aa17.58■□□□□ 0.4
SNRPA-208ENST00000600456 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.4
SNRPA-208ENST00000600456 LINS1Q8NG48 757 aa17.58■□□□□ 0.4
SNRPA-208ENST00000600456 MASTLQ96GX5 879 aa17.58■□□□□ 0.4
SNRPA-208ENST00000600456 DLEC1Q9Y238 1755 aa17.58■□□□□ 0.4
SNRPA-208ENST00000600456 NEURL1BA8MQ27 555 aa17.57■□□□□ 0.4
SNRPA-208ENST00000600456 TTLL6Q8N841 843 aa17.57■□□□□ 0.4
SNRPA-208ENST00000600456 CNKSR1Q969H4 720 aa17.57■□□□□ 0.4
SNRPA-208ENST00000600456 NLRP3Q96P20 1036 aa17.57■□□□□ 0.4
SNRPA-208ENST00000600456 BCL2L13Q9BXK5 485 aa17.57■□□□□ 0.4
SNRPA-208ENST00000600456 BCS1LQ9Y276 419 aa17.57■□□□□ 0.4
SNRPA-208ENST00000600456 BRCA1P38398 1863 aaKnown RBP17.56■□□□□ 0.4
SNRPA-208ENST00000600456 PCCAP05165 728 aaPredicted RBP17.56■□□□□ 0.4
SNRPA-208ENST00000600456 ZNF622Q969S3 477 aaKnown RBP eCLIP17.56■□□□□ 0.47e-14■■□□□ 13.7
SNRPA-208ENST00000600456 FAM89AQ96GI7 184 aa17.56■□□□□ 0.4
SNRPA-208ENST00000600456 COL11A2P13942 1736 aaPredicted RBP17.55■□□□□ 0.4
SNRPA-208ENST00000600456 F6X3S4 739 aa17.55■□□□□ 0.4
SNRPA-208ENST00000600456 HOXA10P31260 410 aaPredicted RBP17.55■□□□□ 0.4
SNRPA-208ENST00000600456 CWF19L2Q2TBE0 894 aaKnown RBP17.55■□□□□ 0.4
SNRPA-208ENST00000600456 WWC3Q9ULE0 1092 aa17.55■□□□□ 0.4
SNRPA-208ENST00000600456 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
SNRPA-208ENST00000600456 KIF16BQ96L93 1317 aa17.54■□□□□ 0.4
SNRPA-208ENST00000600456 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
SNRPA-208ENST00000600456 ALDH1B1P30837 517 aa17.54■□□□□ 0.4
SNRPA-208ENST00000600456 GCKRQ14397 625 aa17.54■□□□□ 0.4
SNRPA-208ENST00000600456 BEND3Q5T5X7 828 aa17.54■□□□□ 0.4
SNRPA-208ENST00000600456 RPGRQ92834 1020 aaKnown RBP17.54■□□□□ 0.4
SNRPA-208ENST00000600456 CDHR2Q9BYE9 1310 aa17.53■□□□□ 0.4
SNRPA-208ENST00000600456 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
SNRPA-208ENST00000600456 ALDH1L1O75891 902 aa17.53■□□□□ 0.4
SNRPA-208ENST00000600456 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
SNRPA-208ENST00000600456 H7C1W4 665 aa17.52■□□□□ 0.4
SNRPA-208ENST00000600456 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.4
SNRPA-208ENST00000600456 C3orf67Q6ZVT6 689 aa17.52■□□□□ 0.4
SNRPA-208ENST00000600456 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.4
SNRPA-208ENST00000600456 RBM17Q96I25 401 aaKnown RBP17.52■□□□□ 0.4
SNRPA-208ENST00000600456 CRAMP1Q96RY5 1269 aa17.52■□□□□ 0.4
SNRPA-208ENST00000600456 API5Q9BZZ5 524 aaKnown RBP17.52■□□□□ 0.4
SNRPA-208ENST00000600456 SRCIN1Q9C0H9 1055 aa17.52■□□□□ 0.4
SNRPA-208ENST00000600456 SF3B3Q15393 1217 aaKnown RBP17.51■□□□□ 0.39
SNRPA-208ENST00000600456 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
SNRPA-208ENST00000600456 SLC4A10Q6U841 1118 aa17.51■□□□□ 0.39
SNRPA-208ENST00000600456 NOB1Q9ULX3 412 aaKnown RBP17.51■□□□□ 0.39
SNRPA-208ENST00000600456 ARFGEF1Q9Y6D6 1849 aa17.5■□□□□ 0.39
SNRPA-208ENST00000600456 IPO8O15397 1037 aaKnown RBP17.5■□□□□ 0.39
SNRPA-208ENST00000600456 PDE8AO60658 829 aa17.5■□□□□ 0.39
SNRPA-208ENST00000600456 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
SNRPA-208ENST00000600456 LAMB2P55268 1798 aa17.5■□□□□ 0.39
SNRPA-208ENST00000600456 UBE3BQ7Z3V4 1068 aa17.49■□□□□ 0.39
SNRPA-208ENST00000600456 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
SNRPA-208ENST00000600456 CASP7P55210 303 aa17.48■□□□□ 0.39
SNRPA-208ENST00000600456 DDX46Q7L014 1031 aaKnown RBP17.48■□□□□ 0.39
SNRPA-208ENST00000600456 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
SNRPA-208ENST00000600456 GRM8O00222 908 aa17.47■□□□□ 0.39
SNRPA-208ENST00000600456 C21orf2O43822 256 aa17.47■□□□□ 0.39
SNRPA-208ENST00000600456 BCAR3O75815 825 aa17.47■□□□□ 0.39
SNRPA-208ENST00000600456 CCT4P50991 539 aaKnown RBP17.47■□□□□ 0.39
SNRPA-208ENST00000600456 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
SNRPA-208ENST00000600456 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
SNRPA-208ENST00000600456 C9orf78Q9NZ63 289 aaPredicted RBP17.47■□□□□ 0.39
SNRPA-208ENST00000600456 ABCC4O15439 1325 aa17.47■□□□□ 0.39
SNRPA-208ENST00000600456 BBOX1O75936 387 aa17.46■□□□□ 0.39
SNRPA-208ENST00000600456 CCDC152Q4G0S7 254 aa17.46■□□□□ 0.39
SNRPA-208ENST00000600456 CC2D2BQ6DHV5 1058 aa17.46■□□□□ 0.39
SNRPA-208ENST00000600456 JARID2Q92833 1246 aaPredicted RBP17.46■□□□□ 0.39
SNRPA-208ENST00000600456 PPEF1O14829 653 aaPredicted RBP17.45■□□□□ 0.38
SNRPA-208ENST00000600456 CTSWP56202 376 aa17.45■□□□□ 0.38
SNRPA-208ENST00000600456 GRAPQ13588 217 aa17.45■□□□□ 0.38
SNRPA-208ENST00000600456 GRIPAP1Q4V328 841 aa17.45■□□□□ 0.38
SNRPA-208ENST00000600456 CCDC93Q567U6 631 aa17.45■□□□□ 0.38
SNRPA-208ENST00000600456 ATF7IPQ6VMQ6 1270 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms