RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 RILPL2Q969X0 211 aa18.63■□□□□ 0.57
HIF3A-218ENST00000600383 CCDC87Q9NVE4 849 aa18.63■□□□□ 0.57
HIF3A-218ENST00000600383 SASH1O94885 1247 aa18.62■□□□□ 0.57
HIF3A-218ENST00000600383 FOXO4P98177 505 aa18.62■□□□□ 0.57
HIF3A-218ENST00000600383 RABL6Q3YEC7 729 aaPredicted RBP18.62■□□□□ 0.57
HIF3A-218ENST00000600383 FAM89AQ96GI7 184 aa18.62■□□□□ 0.57
HIF3A-218ENST00000600383 STAP2Q9UGK3 403 aa18.62■□□□□ 0.57
HIF3A-218ENST00000600383 NUP188Q5SRE5 1749 aa18.62■□□□□ 0.57
HIF3A-218ENST00000600383 TRPC5Q9UL62 973 aaPredicted RBP18.62■□□□□ 0.57
HIF3A-218ENST00000600383 IFIT2P09913 472 aaKnown RBP18.61■□□□□ 0.57
HIF3A-218ENST00000600383 CASC1Q6TDU7 716 aa18.61■□□□□ 0.57
HIF3A-218ENST00000600383 QTRT2Q9H974 415 aaKnown RBP18.61■□□□□ 0.57
HIF3A-218ENST00000600383 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.61■□□□□ 0.57
HIF3A-218ENST00000600383 MAP4K4O95819 1239 aaPredicted RBP18.61■□□□□ 0.57
HIF3A-218ENST00000600383 AACSQ86V21 672 aa18.61■□□□□ 0.57
HIF3A-218ENST00000600383 RFX5P48382 616 aaPredicted RBP18.6■□□□□ 0.57
HIF3A-218ENST00000600383 PTPN12Q05209 780 aaKnown RBP18.6■□□□□ 0.57
HIF3A-218ENST00000600383 EIF5P55010 431 aaKnown RBP18.59■□□□□ 0.57
HIF3A-218ENST00000600383 TRIM28Q13263 835 aaKnown RBP18.59■□□□□ 0.57
HIF3A-218ENST00000600383 HSP90AB3PQ58FF7 597 aa18.59■□□□□ 0.57
HIF3A-218ENST00000600383 SEPT12Q8IYM1 358 aa18.59■□□□□ 0.57
HIF3A-218ENST00000600383 COPRSQ9NQ92 184 aa18.59■□□□□ 0.57
HIF3A-218ENST00000600383 TJP1Q07157 1748 aa18.59■□□□□ 0.57
HIF3A-218ENST00000600383 SYNE4Q8N205 404 aa18.59■□□□□ 0.57
HIF3A-218ENST00000600383 CCDC8Q9H0W5 538 aaPredicted RBP18.59■□□□□ 0.57
HIF3A-218ENST00000600383 COL15A1P39059 1388 aa18.58■□□□□ 0.57
HIF3A-218ENST00000600383 CCDC85AQ96PX6 553 aaPredicted RBP18.58■□□□□ 0.57
HIF3A-218ENST00000600383 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.58■□□□□ 0.57
HIF3A-218ENST00000600383 NLRP10Q86W26 655 aa18.58■□□□□ 0.56
HIF3A-218ENST00000600383 ZBTB38Q8NAP3 1195 aaPredicted RBP18.58■□□□□ 0.56
HIF3A-218ENST00000600383 EAF2Q96CJ1 260 aaPredicted RBP18.58■□□□□ 0.56
HIF3A-218ENST00000600383 ERVV-1B6SEH8 477 aa18.57■□□□□ 0.56
HIF3A-218ENST00000600383 PI4K2BQ8TCG2 481 aa18.57■□□□□ 0.56
HIF3A-218ENST00000600383 PCCAP05165 728 aaPredicted RBP18.56■□□□□ 0.56
HIF3A-218ENST00000600383 TRMT112Q9UI30 125 aaKnown RBP18.56■□□□□ 0.56
HIF3A-218ENST00000600383 FAM177BA6PVY3 158 aa18.56■□□□□ 0.56
HIF3A-218ENST00000600383 TFCP2Q12800 502 aa18.56■□□□□ 0.56
HIF3A-218ENST00000600383 ZNF594Q96JF6 807 aaPredicted RBP18.56■□□□□ 0.56
HIF3A-218ENST00000600383 AOX1Q06278 1338 aa18.56■□□□□ 0.56
HIF3A-218ENST00000600383 LINC00116Q8NCU8 138 aa18.55■□□□□ 0.56
HIF3A-218ENST00000600383 GPATCH3Q96I76 525 aa18.55■□□□□ 0.56
HIF3A-218ENST00000600383 ECHDC1Q9NTX5 307 aa18.55■□□□□ 0.56
HIF3A-218ENST00000600383 ERC2O15083 957 aa18.55■□□□□ 0.56
HIF3A-218ENST00000600383 ONECUT3O60422 494 aaPredicted RBP18.55■□□□□ 0.56
HIF3A-218ENST00000600383 TLR7Q9NYK1 1049 aaKnown RBP18.54■□□□□ 0.56
HIF3A-218ENST00000600383 TTC41PQ6P2S7 1318 aa18.54■□□□□ 0.56
HIF3A-218ENST00000600383 GLRX3O76003 335 aaKnown RBP18.53■□□□□ 0.56
HIF3A-218ENST00000600383 RBM25P49756 843 aaKnown RBP18.53■□□□□ 0.56
HIF3A-218ENST00000600383 CCDC57Q2TAC2 916 aa18.53■□□□□ 0.56
HIF3A-218ENST00000600383 ATRNO75882 1429 aa18.53■□□□□ 0.56
HIF3A-218ENST00000600383 THSD7AQ9UPZ6 1657 aa18.52■□□□□ 0.56
HIF3A-218ENST00000600383 MYH14Q7Z406 1995 aaKnown RBP18.52■□□□□ 0.56
HIF3A-218ENST00000600383 IRS4O14654 1257 aaPredicted RBP18.52■□□□□ 0.56
HIF3A-218ENST00000600383 EIF5BO60841 1220 aaKnown RBP18.52■□□□□ 0.56
HIF3A-218ENST00000600383 BECN1Q14457 450 aa18.52■□□□□ 0.56
HIF3A-218ENST00000600383 SMIM5Q71RC9 77 aa18.52■□□□□ 0.56
HIF3A-218ENST00000600383 ZNF34Q8IZ26 560 aa18.52■□□□□ 0.56
HIF3A-218ENST00000600383 UBN2Q6ZU65 1347 aa18.52■□□□□ 0.56
HIF3A-218ENST00000600383 CAMTA2O94983 1202 aa18.52■□□□□ 0.55
HIF3A-218ENST00000600383 CHMLP26374 656 aa18.52■□□□□ 0.55
HIF3A-218ENST00000600383 CNTROBQ8N137 903 aa18.52■□□□□ 0.55
HIF3A-218ENST00000600383 USP42Q9H9J4 1324 aaKnown RBP18.51■□□□□ 0.55
HIF3A-218ENST00000600383 LRRC24Q50LG9 513 aa18.51■□□□□ 0.55
HIF3A-218ENST00000600383 TNNI3KQ59H18 835 aa18.51■□□□□ 0.55
HIF3A-218ENST00000600383 CCNL1Q9UK58 526 aaPredicted RBP18.51■□□□□ 0.55
HIF3A-218ENST00000600383 FPGT-TNNI3KV9GXZ4 949 aa18.51■□□□□ 0.55
HIF3A-218ENST00000600383 TAF7LQ5H9L4 462 aa18.5■□□□□ 0.55
HIF3A-218ENST00000600383 ATG9AQ7Z3C6 839 aa18.5■□□□□ 0.55
HIF3A-218ENST00000600383 USP26Q9BXU7 913 aa18.5■□□□□ 0.55
HIF3A-218ENST00000600383 PUS3Q9BZE2 481 aaKnown RBP18.5■□□□□ 0.55
HIF3A-218ENST00000600383 NUP98P52948 1817 aa18.5■□□□□ 0.55
HIF3A-218ENST00000600383 REC8O95072 547 aa18.5■□□□□ 0.55
HIF3A-218ENST00000600383 IFIT5Q13325 482 aaKnown RBP18.5■□□□□ 0.55
HIF3A-218ENST00000600383 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
HIF3A-218ENST00000600383 PLA2G12BQ9BX93 195 aa18.5■□□□□ 0.55
HIF3A-218ENST00000600383 NIP7Q9Y221 180 aaKnown RBP eCLIP18.5■□□□□ 0.55
HIF3A-218ENST00000600383 EYA2O00167 538 aa18.49■□□□□ 0.55
HIF3A-218ENST00000600383 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
HIF3A-218ENST00000600383 BOLA2Q9H3K6 86 aa18.49■□□□□ 0.55
HIF3A-218ENST00000600383 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
HIF3A-218ENST00000600383 CSF1RP07333 972 aa18.49■□□□□ 0.55
HIF3A-218ENST00000600383 IL15P40933 162 aaPredicted RBP18.49■□□□□ 0.55
HIF3A-218ENST00000600383 ESYT1Q9BSJ8 1104 aa18.49■□□□□ 0.55
HIF3A-218ENST00000600383 TTLL11Q8NHH1 800 aa18.48■□□□□ 0.55
HIF3A-218ENST00000600383 DBNLQ9UJU6 430 aaKnown RBP18.48■□□□□ 0.55
HIF3A-218ENST00000600383 UTP14AQ9BVJ6 771 aaKnown RBP18.47■□□□□ 0.55
HIF3A-218ENST00000600383 TBC1D2Q9BYX2 928 aa18.47■□□□□ 0.55
HIF3A-218ENST00000600383 GREM2Q9H772 168 aa18.47■□□□□ 0.55
HIF3A-218ENST00000600383 GNPATO15228 680 aa18.47■□□□□ 0.55
HIF3A-218ENST00000600383 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
HIF3A-218ENST00000600383 ITGA6P23229 1130 aa18.47■□□□□ 0.55
HIF3A-218ENST00000600383 CTSWP56202 376 aa18.47■□□□□ 0.55
HIF3A-218ENST00000600383 TIMM10P62072 90 aa18.47■□□□□ 0.55
HIF3A-218ENST00000600383 DBNDD2Q9BQY9 259 aa18.47■□□□□ 0.55
HIF3A-218ENST00000600383 BTAF1O14981 1849 aa18.46■□□□□ 0.55
HIF3A-218ENST00000600383 PDE8AO60658 829 aa18.46■□□□□ 0.55
HIF3A-218ENST00000600383 KIF2CQ99661 725 aa18.46■□□□□ 0.55
HIF3A-218ENST00000600383 ANO2Q9NQ90 1003 aa18.46■□□□□ 0.55
HIF3A-218ENST00000600383 ZNF652Q9Y2D9 606 aa18.46■□□□□ 0.55
HIF3A-218ENST00000600383 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms