RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 DLG5Q8TDM6 1919 aa16.46■□□□□ 0.23
HOMER3-211ENST00000599808 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
HOMER3-211ENST00000599808 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
HOMER3-211ENST00000599808 U2AF1L5P0DN76 240 aaPredicted RBP16.44■□□□□ 0.22
HOMER3-211ENST00000599808 SCNN1DP51172 638 aa16.44■□□□□ 0.22
HOMER3-211ENST00000599808 U2AF1Q01081 240 aaKnown RBP eCLIP16.44■□□□□ 0.22
HOMER3-211ENST00000599808 CC2D2BQ6DHV5 1058 aa16.44■□□□□ 0.22
HOMER3-211ENST00000599808 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
HOMER3-211ENST00000599808 NYXQ9GZU5 481 aa16.44■□□□□ 0.22
HOMER3-211ENST00000599808 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
HOMER3-211ENST00000599808 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
HOMER3-211ENST00000599808 HTATSF1O43719 755 aaKnown RBP16.43■□□□□ 0.22
HOMER3-211ENST00000599808 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
HOMER3-211ENST00000599808 HOXA10P31260 410 aaPredicted RBP16.43■□□□□ 0.22
HOMER3-211ENST00000599808 EPS15P42566 896 aa16.43■□□□□ 0.22
HOMER3-211ENST00000599808 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
HOMER3-211ENST00000599808 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
HOMER3-211ENST00000599808 CAPNS2Q96L46 248 aa16.43■□□□□ 0.22
HOMER3-211ENST00000599808 ERVV-1B6SEH8 477 aa16.42■□□□□ 0.22
HOMER3-211ENST00000599808 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
HOMER3-211ENST00000599808 LARGE2Q8N3Y3 721 aa16.42■□□□□ 0.22
HOMER3-211ENST00000599808 RPGRQ92834 1020 aaKnown RBP16.42■□□□□ 0.22
HOMER3-211ENST00000599808 RIC1Q4ADV7 1423 aa16.42■□□□□ 0.22
HOMER3-211ENST00000599808 MAP3K15Q6ZN16 1313 aa16.42■□□□□ 0.22
HOMER3-211ENST00000599808 TRAF5O00463 557 aa16.41■□□□□ 0.22
HOMER3-211ENST00000599808 CST9Q5W186 159 aa16.41■□□□□ 0.22
HOMER3-211ENST00000599808 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
HOMER3-211ENST00000599808 TTLL7Q6ZT98 887 aa16.41■□□□□ 0.22
HOMER3-211ENST00000599808 PAXIP1Q6ZW49 1069 aaPredicted RBP16.41■□□□□ 0.22
HOMER3-211ENST00000599808 UBN2Q6ZU65 1347 aa16.41■□□□□ 0.22
HOMER3-211ENST00000599808 SLC34A2O95436 690 aa16.4■□□□□ 0.22
HOMER3-211ENST00000599808 GPTP24298 496 aa16.4■□□□□ 0.22
HOMER3-211ENST00000599808 ECE1P42892 770 aa16.4■□□□□ 0.22
HOMER3-211ENST00000599808 GRM1Q13255 1194 aa16.4■□□□□ 0.22
HOMER3-211ENST00000599808 USP50Q70EL3 339 aaPredicted RBP16.4■□□□□ 0.22
HOMER3-211ENST00000599808 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
HOMER3-211ENST00000599808 IBTKQ9P2D0 1353 aaPredicted RBP16.39■□□□□ 0.21
HOMER3-211ENST00000599808 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
HOMER3-211ENST00000599808 PPP2R1AP30153 589 aa16.39■□□□□ 0.21
HOMER3-211ENST00000599808 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
HOMER3-211ENST00000599808 SUSD4Q5VX71 490 aa16.39■□□□□ 0.21
HOMER3-211ENST00000599808 RBM17Q96I25 401 aaKnown RBP16.39■□□□□ 0.21
HOMER3-211ENST00000599808 CRAMP1Q96RY5 1269 aa16.39■□□□□ 0.21
HOMER3-211ENST00000599808 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
HOMER3-211ENST00000599808 CASP8AP2Q9UKL3 1982 aa16.38■□□□□ 0.21
HOMER3-211ENST00000599808 PPEF1O14829 653 aaPredicted RBP16.38■□□□□ 0.21
HOMER3-211ENST00000599808 KIF6Q6ZMV9 814 aa16.38■□□□□ 0.21
HOMER3-211ENST00000599808 C3orf67Q6ZVT6 689 aa16.38■□□□□ 0.21
HOMER3-211ENST00000599808 NIM1KQ8IY84 436 aa16.38■□□□□ 0.21
HOMER3-211ENST00000599808 BEGAINQ9BUH8 593 aa16.38■□□□□ 0.21
HOMER3-211ENST00000599808 ZBTB3Q9H5J0 574 aa16.38■□□□□ 0.21
HOMER3-211ENST00000599808 TLL2Q9Y6L7 1015 aa16.38■□□□□ 0.21
HOMER3-211ENST00000599808 NTSR2O95665 410 aa16.37■□□□□ 0.21
HOMER3-211ENST00000599808 MYL6BP14649 208 aa16.37■□□□□ 0.21
HOMER3-211ENST00000599808 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
HOMER3-211ENST00000599808 TSKSQ9UJT2 592 aa16.37■□□□□ 0.21
HOMER3-211ENST00000599808 LAMB2P55268 1798 aa16.36■□□□□ 0.21
HOMER3-211ENST00000599808 CCDC85CA6NKD9 419 aa16.36■□□□□ 0.21
HOMER3-211ENST00000599808 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
HOMER3-211ENST00000599808 AOC2O75106 756 aa16.36■□□□□ 0.21
HOMER3-211ENST00000599808 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
HOMER3-211ENST00000599808 AOC3Q16853 763 aa16.36■□□□□ 0.21
HOMER3-211ENST00000599808 ADARB2Q9NS39 739 aaKnown RBP16.36■□□□□ 0.21
HOMER3-211ENST00000599808 GPRC5DQ9NZD1 345 aa16.36■□□□□ 0.21
HOMER3-211ENST00000599808 MAP2K2P36507 400 aa16.35■□□□□ 0.21
HOMER3-211ENST00000599808 PNISRQ8TF01 805 aaKnown RBP16.35■□□□□ 0.21
HOMER3-211ENST00000599808 RGS19P49795 217 aa16.34■□□□□ 0.21
HOMER3-211ENST00000599808 CXCL9Q07325 125 aa16.34■□□□□ 0.21
HOMER3-211ENST00000599808 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
HOMER3-211ENST00000599808 SAPCD2Q86UD0 394 aa16.34■□□□□ 0.21
HOMER3-211ENST00000599808 ATP6V0A2Q9Y487 856 aa16.34■□□□□ 0.21
HOMER3-211ENST00000599808 ANKRD36CQ5JPF3 1778 aa16.33■□□□□ 0.21
HOMER3-211ENST00000599808 TAF1P21675 1872 aa16.33■□□□□ 0.21
HOMER3-211ENST00000599808 CELF2O95319 508 aaKnown RBP16.33■□□□□ 0.2
HOMER3-211ENST00000599808 MLLT1Q03111 559 aaPredicted RBP16.33■□□□□ 0.2
HOMER3-211ENST00000599808 NLRP3Q96P20 1036 aa16.33■□□□□ 0.2
HOMER3-211ENST00000599808 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
HOMER3-211ENST00000599808 GLIS2Q9BZE0 524 aaPredicted RBP16.33■□□□□ 0.2
HOMER3-211ENST00000599808 VPS33BQ9H267 617 aa16.33■□□□□ 0.2
HOMER3-211ENST00000599808 ZNRF3Q9ULT6 936 aa16.33■□□□□ 0.2
HOMER3-211ENST00000599808 ABCC4O15439 1325 aa16.32■□□□□ 0.2
HOMER3-211ENST00000599808 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
HOMER3-211ENST00000599808 PPP1R42Q7Z4L9 355 aa16.32■□□□□ 0.2
HOMER3-211ENST00000599808 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
HOMER3-211ENST00000599808 PARP10Q53GL7 1025 aa16.31■□□□□ 0.2
HOMER3-211ENST00000599808 SLC10A5Q5PT55 438 aa16.31■□□□□ 0.2
HOMER3-211ENST00000599808 TMX4Q9H1E5 349 aaPredicted RBP16.31■□□□□ 0.2
HOMER3-211ENST00000599808 PGAP2Q9UHJ9 254 aa16.31■□□□□ 0.2
HOMER3-211ENST00000599808 POLR2AP24928 1970 aaKnown RBP16.31■□□□□ 0.2
HOMER3-211ENST00000599808 ERBB4Q15303 1308 aa16.3■□□□□ 0.2
HOMER3-211ENST00000599808 HIRAP54198 1017 aaPredicted RBP16.3■□□□□ 0.2
HOMER3-211ENST00000599808 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
HOMER3-211ENST00000599808 SUPT20HQ8NEM7 779 aa16.3■□□□□ 0.2
HOMER3-211ENST00000599808 HHIPL1Q96JK4 782 aa16.3■□□□□ 0.2
HOMER3-211ENST00000599808 MCOLN1Q9GZU1 580 aa16.3■□□□□ 0.2
HOMER3-211ENST00000599808 TNRC18O15417 2968 aaPredicted RBP16.29■□□□□ 0.2
HOMER3-211ENST00000599808 CA12O43570 354 aa16.29■□□□□ 0.2
HOMER3-211ENST00000599808 NEFMP07197 916 aa16.29■□□□□ 0.2
HOMER3-211ENST00000599808 BRPF1P55201 1214 aaPredicted RBP16.29■□□□□ 0.2
HOMER3-211ENST00000599808 CIAPIN1Q6FI81 312 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms