RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 TIAM2Q8IVF5 1701 aa25.69■■□□□ 1.7
ARHGEF1-217ENST00000598812 TNRC6CQ9HCJ0 1690 aaKnown RBP25.69■■□□□ 1.7
ARHGEF1-217ENST00000598812 HTRA3P83110 453 aa25.69■■□□□ 1.7
ARHGEF1-217ENST00000598812 CCDC93Q567U6 631 aa25.69■■□□□ 1.7
ARHGEF1-217ENST00000598812 HSP90AB3PQ58FF7 597 aa25.69■■□□□ 1.7
ARHGEF1-217ENST00000598812 DUSP27Q5VZP5 1158 aa25.69■■□□□ 1.7
ARHGEF1-217ENST00000598812 NTSR2O95665 410 aa25.68■■□□□ 1.7
ARHGEF1-217ENST00000598812 ZNF853P0CG23 659 aa25.68■■□□□ 1.7
ARHGEF1-217ENST00000598812 CRY2Q49AN0 593 aa25.68■■□□□ 1.7
ARHGEF1-217ENST00000598812 C7orf43Q8WVR3 580 aa25.68■■□□□ 1.7
ARHGEF1-217ENST00000598812 RIC1Q4ADV7 1423 aa25.67■■□□□ 1.7
ARHGEF1-217ENST00000598812 RPGRQ92834 1020 aaKnown RBP25.67■■□□□ 1.7
ARHGEF1-217ENST00000598812 RRAGCQ9HB90 399 aa25.67■■□□□ 1.7
ARHGEF1-217ENST00000598812 DBF4Q9UBU7 674 aaPredicted RBP25.67■■□□□ 1.7
ARHGEF1-217ENST00000598812 GLTPD2A6NH11 291 aa25.66■■□□□ 1.7
ARHGEF1-217ENST00000598812 UTP14AQ9BVJ6 771 aaKnown RBP25.66■■□□□ 1.7
ARHGEF1-217ENST00000598812 MRS2Q9HD23 443 aa25.66■■□□□ 1.7
ARHGEF1-217ENST00000598812 DPY19L2Q6NUT2 758 aa25.64■■□□□ 1.7
ARHGEF1-217ENST00000598812 DICER1Q9UPY3 1922 aaKnown RBP25.64■■□□□ 1.69
ARHGEF1-217ENST00000598812 ANKRD36CQ5JPF3 1778 aa25.64■■□□□ 1.69
ARHGEF1-217ENST00000598812 RTKN2Q8IZC4 609 aa25.63■■□□□ 1.69
ARHGEF1-217ENST00000598812 HYPKQ9NX55 129 aa25.63■■□□□ 1.69
ARHGEF1-217ENST00000598812 RNF123Q5XPI4 1314 aa25.63■■□□□ 1.69
ARHGEF1-217ENST00000598812 CAPN15O75808 1086 aa25.62■■□□□ 1.69
ARHGEF1-217ENST00000598812 HOXA10P31260 410 aaPredicted RBP25.62■■□□□ 1.69
ARHGEF1-217ENST00000598812 TCIRG1Q13488 830 aa25.62■■□□□ 1.69
ARHGEF1-217ENST00000598812 NLRP10Q86W26 655 aa25.62■■□□□ 1.69
ARHGEF1-217ENST00000598812 NLRP3Q96P20 1036 aa25.62■■□□□ 1.69
ARHGEF1-217ENST00000598812 FKBP4Q02790 459 aaKnown RBP eCLIP25.61■■□□□ 1.69
ARHGEF1-217ENST00000598812 FSTL1Q12841 308 aa25.61■■□□□ 1.69
ARHGEF1-217ENST00000598812 OLFM4Q6UX06 510 aa25.61■■□□□ 1.69
ARHGEF1-217ENST00000598812 PLBD2Q8NHP8 589 aa25.61■■□□□ 1.69
ARHGEF1-217ENST00000598812 RBM17Q96I25 401 aaKnown RBP25.61■■□□□ 1.69
ARHGEF1-217ENST00000598812 ELL2O00472 640 aaPredicted RBP25.6■■□□□ 1.69
ARHGEF1-217ENST00000598812 ANKRD13DQ6ZTN6 518 aa25.6■■□□□ 1.69
ARHGEF1-217ENST00000598812 VEGFAP15692 232 aaPredicted RBP25.59■■□□□ 1.69
ARHGEF1-217ENST00000598812 SLC10A5Q5PT55 438 aa25.59■■□□□ 1.69
ARHGEF1-217ENST00000598812 TNS4Q8IZW8 715 aa25.59■■□□□ 1.69
ARHGEF1-217ENST00000598812 CRAMP1Q96RY5 1269 aa25.59■■□□□ 1.69
ARHGEF1-217ENST00000598812 TRMT112Q9UI30 125 aaKnown RBP25.59■■□□□ 1.69
ARHGEF1-217ENST00000598812 CCDC27Q2M243 656 aa25.58■■□□□ 1.69
ARHGEF1-217ENST00000598812 CC2D2BQ6DHV5 1058 aa25.58■■□□□ 1.69
ARHGEF1-217ENST00000598812 C3orf67Q6ZVT6 689 aa25.58■■□□□ 1.69
ARHGEF1-217ENST00000598812 ZNF277Q9NRM2 450 aaPredicted RBP25.58■■□□□ 1.69
ARHGEF1-217ENST00000598812 CHMP4AQ9BY43 222 aa25.57■■□□□ 1.68
ARHGEF1-217ENST00000598812 PCNTO95613 3336 aa25.57■■□□□ 1.68
ARHGEF1-217ENST00000598812 SH3TC1Q8TE82 1336 aa25.57■■□□□ 1.68
ARHGEF1-217ENST00000598812 WWC1Q8IX03 1113 aa25.56■■□□□ 1.68
ARHGEF1-217ENST00000598812 C8orf58Q8NAV2 365 aa25.56■■□□□ 1.68
ARHGEF1-217ENST00000598812 PPEF1O14829 653 aaPredicted RBP25.55■■□□□ 1.68
ARHGEF1-217ENST00000598812 GOLGA2Q08379 1002 aa25.55■■□□□ 1.68
ARHGEF1-217ENST00000598812 HCLS1P14317 486 aaPredicted RBP25.54■■□□□ 1.68
ARHGEF1-217ENST00000598812 GRIPAP1Q4V328 841 aa25.54■■□□□ 1.68
ARHGEF1-217ENST00000598812 SYNE4Q8N205 404 aa25.54■■□□□ 1.68
ARHGEF1-217ENST00000598812 PSMD1Q99460 953 aa25.54■■□□□ 1.68
ARHGEF1-217ENST00000598812 TMX4Q9H1E5 349 aaPredicted RBP25.54■■□□□ 1.68
ARHGEF1-217ENST00000598812 TCERG1O14776 1098 aaKnown RBP25.53■■□□□ 1.68
ARHGEF1-217ENST00000598812 IARSP41252 1262 aaKnown RBP25.53■■□□□ 1.68
ARHGEF1-217ENST00000598812 CCDC30Q5VVM6 783 aa25.53■■□□□ 1.68
ARHGEF1-217ENST00000598812 RIC3Q7Z5B4 369 aa25.53■■□□□ 1.68
ARHGEF1-217ENST00000598812 SMC1BQ8NDV3 1235 aa25.53■■□□□ 1.68
ARHGEF1-217ENST00000598812 TSR2Q969E8 191 aaKnown RBP25.53■■□□□ 1.68
ARHGEF1-217ENST00000598812 ATP5J2-PTCD1G3V325 749 aa25.52■■□□□ 1.68
ARHGEF1-217ENST00000598812 NCBP3Q53F19 620 aaKnown RBP25.52■■□□□ 1.68
ARHGEF1-217ENST00000598812 ZNF428Q96B54 188 aa25.52■■□□□ 1.68
ARHGEF1-217ENST00000598812 ISCA1Q9BUE6 129 aa25.52■■□□□ 1.68
ARHGEF1-217ENST00000598812 DDNO94850 711 aaPredicted RBP25.51■■□□□ 1.67
ARHGEF1-217ENST00000598812 PHAXQ9H814 394 aaKnown RBP25.51■■□□□ 1.67
ARHGEF1-217ENST00000598812 SNED1Q8TER0 1413 aa25.51■■□□□ 1.67
ARHGEF1-217ENST00000598812 ABCC4O15439 1325 aa25.5■■□□□ 1.67
ARHGEF1-217ENST00000598812 IL16Q14005 1332 aa25.5■■□□□ 1.67
ARHGEF1-217ENST00000598812 POTECB2RU33 542 aa25.49■■□□□ 1.67
ARHGEF1-217ENST00000598812 DDX46Q7L014 1031 aaKnown RBP25.49■■□□□ 1.67
ARHGEF1-217ENST00000598812 TSPYL6Q8N831 410 aa25.49■■□□□ 1.67
ARHGEF1-217ENST00000598812 JDP2Q8WYK2 163 aa25.49■■□□□ 1.67
ARHGEF1-217ENST00000598812 LAMB2P55268 1798 aa25.49■■□□□ 1.67
ARHGEF1-217ENST00000598812 DDX58O95786 925 aaKnown RBP25.48■■□□□ 1.67
ARHGEF1-217ENST00000598812 TRIM28Q13263 835 aaKnown RBP25.48■■□□□ 1.67
ARHGEF1-217ENST00000598812 FAM89AQ96GI7 184 aa25.48■■□□□ 1.67
ARHGEF1-217ENST00000598812 ATP6V0A2Q9Y487 856 aa25.48■■□□□ 1.67
ARHGEF1-217ENST00000598812 BBOX1O75936 387 aa25.47■■□□□ 1.67
ARHGEF1-217ENST00000598812 SALL2Q9Y467 1007 aaPredicted RBP25.47■■□□□ 1.67
ARHGEF1-217ENST00000598812 ZNF541Q9H0D2 1346 aa25.46■■□□□ 1.67
ARHGEF1-217ENST00000598812 STK31Q9BXU1 1019 aa25.46■■□□□ 1.67
ARHGEF1-217ENST00000598812 IQCA1LA6NCM1 817 aa25.45■■□□□ 1.66
ARHGEF1-217ENST00000598812 TWISTNBQ3B726 338 aaPredicted RBP25.45■■□□□ 1.66
ARHGEF1-217ENST00000598812 RTL5Q5HYW3 569 aaPredicted RBP25.45■■□□□ 1.66
ARHGEF1-217ENST00000598812 SLC51AQ86UW1 340 aa25.45■■□□□ 1.66
ARHGEF1-217ENST00000598812 FAM9BQ8IZU0 186 aa25.45■■□□□ 1.66
ARHGEF1-217ENST00000598812 MYD88Q99836 296 aa25.45■■□□□ 1.66
ARHGEF1-217ENST00000598812 FZD9O00144 591 aa25.44■■□□□ 1.66
ARHGEF1-217ENST00000598812 HSPA1AP0DMV8 641 aaKnown RBP25.44■■□□□ 1.66
ARHGEF1-217ENST00000598812 HSPA1BP0DMV9 641 aaKnown RBP25.44■■□□□ 1.66
ARHGEF1-217ENST00000598812 GRAPQ13588 217 aa25.44■■□□□ 1.66
ARHGEF1-217ENST00000598812 LARGE2Q8N3Y3 721 aa25.44■■□□□ 1.66
ARHGEF1-217ENST00000598812 GRAPLQ8TC17 118 aaPredicted RBP25.44■■□□□ 1.66
ARHGEF1-217ENST00000598812 L3MBTL3Q96JM7 780 aaPredicted RBP25.44■■□□□ 1.66
ARHGEF1-217ENST00000598812 DDX60Q8IY21 1712 aaKnown RBP25.43■■□□□ 1.66
ARHGEF1-217ENST00000598812 WDR63Q8IWG1 891 aa25.43■■□□□ 1.66
ARHGEF1-217ENST00000598812 SP8Q8IXZ3 490 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms